BacMap

Definition	Oceanobacillus iheyensis HTE831, complete genome.
Accession	NC_004193
Length	3,630,528

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The map label for this gene is yqhH [H]

Identifier: 23099360

GI number: 23099360

Start: 1936464

End: 1938134

Strand: Direct

Name: yqhH [H]

Synonym: OB1905

Alternate gene names: 23099360

Gene position: 1936464-1938134 (Clockwise)

Preceding gene: 23099356

Following gene: 23099361

Centisome position: 53.34

GC content: 32.85

Gene sequence:

>1671_bases
ATGGATTCTATCCAAGTCAACAAAGACGAACAATTTATCATCGACCTGGATGAAGCGATGCAACGAGAGGAAAATCTAAC
AAGCTGGAAACTCTTCTCTATGGCGTATGAAGCAGAAAAACAAACGATGAGTCCTTCATTTAAAGGACTTCGATCTGTAA
ATCATTTATCGCATCTTCAAATATTGGATCACCAACGAGAAGCTGCTGAACAAGTTATCGAAGAAATGGATGGTAGAGCT
ATCCTTGCTGATGAAGTGGGATTAGGCAAGACAATTGAAGCTGGTCTAATTTTAAAAGAATATATGGTAAGAGGACTAGT
ATCAAAAGTATTAATTCTTGTACCTGCTTCTTTAGTAAACCAATGGGAAAAAGAATTAAATGACAAATTTTTTATCCCGG
CTATAGCACATCGTAAAAACTATAGCTGGGTAGATAATCATGTAATTATTTCCTCTATTGATACCGCAAAACGATCTCCA
AACAGTGAGGAAATCCTAGATATTGATTATGATTTAATCATCATAGATGAAGCACATAAGTTAAAAAATGAAAAAACAAA
AAACTATCAATTCGTTCGAGAACTAAAGAAGAAATATTGTCTATTACTTACTGCTACACCAGTTCAAAATAAATTACTCG
AGTTATTTAATTTAATCAGTATACTAAAGCCAGGACATTTAGGAAACTATCAAACGTTTACTGAAAAATACGGGAAAGAC
AGAAAAAGAATGGAACAAGATCCTTACTTAAAACAACTTGTTCAAAAAGTGATGATACGAAATACGCGAAAAGAGACAGC
TTTACAGCCTTCTAAAAGAAAAATAGAGACCGTGTGGATGGACTTTACAAAGGAATTCCAACAAATATACGATCAGTTAG
TTCAACTCTCATTTGGAATGTCCTCATTTTCAAAGATTACCTACTTACGTGAATTTTGTTCTTCTCGTGAAGCATGCTAT
ATGTCGTTAGTAAAATTCGTAAAAGATATAGAAGATGAAGAACATCCATTAAAACAAATAATATCTGATTTAGAATCATT
AGAACAACATATAAAAGCGGAACAAATGGTCAAGTTAATTCAATCTTTAGGTGATGAAAAAGTTATCGTGTTTACCGAAT
ACAGAGCTACTCAATATTATTTACAGTGGTTTTTACAACAACACGGGATTACTTCCGTTCCATTCCGAGGTGGATTTAAA
CGCGGAAAAAAAGATTGGATGAAACAGTTGTTTCGAGATCATGCGCAGGTACTAATAGCTACGGAAGCTGGAGGAGAAGG
GATTAATCTTCAATTTTGTCATAATATGATTAATTATGATTTACCCTGGAATCCAATGCGTCTAGAGCAAAGAATAGGAA
GGATTCATCGATTTGGCCAAGAAAAAGACGTACAAATTTATAATTTAGTTATTAAAAATACGATAGAAGAACATATGCTT
TCTTTATTGTATGAAAAGATTGATTTATTCCAGAATGTAATTGGTAATTTAGATGCTATATTAGCTGAATTAAATGTAAA
AAGTTTAGAATCTGAAATGGAATCTATTTATAATGAGTCAAGTTCTAGTGGAGAAGTTCGAATTAAATTAGACAATTTAA
CCTCTATCATAGAACAAGCGAATCCATCAGATAACCAAATGGAAAAGGAGCAAAAGTATGGCAATCCATGA

Upstream 100 bases:

>100_bases
CCAAAATAAAGGAAAATCTATTTTCACTTGGATTATAACACAAATACTGCAGATTTTATAGAAAAAACCAAATTTTATTA
CCAAGAAAAGGGGAAAACAT

Downstream 100 bases:

>100_bases
TTTAAATACTTTTCTAAGTGATTATTTTGAAACAAAGAACTGTTCAATTGAGGAAAATTCAGATGGCAAAATGGTCATTC
AGTTAACCGAAGAAATGGAT

Product: helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 556; Mature: 556

Protein sequence:

>556_residues
MDSIQVNKDEQFIIDLDEAMQREENLTSWKLFSMAYEAEKQTMSPSFKGLRSVNHLSHLQILDHQREAAEQVIEEMDGRA
ILADEVGLGKTIEAGLILKEYMVRGLVSKVLILVPASLVNQWEKELNDKFFIPAIAHRKNYSWVDNHVIISSIDTAKRSP
NSEEILDIDYDLIIIDEAHKLKNEKTKNYQFVRELKKKYCLLLTATPVQNKLLELFNLISILKPGHLGNYQTFTEKYGKD
RKRMEQDPYLKQLVQKVMIRNTRKETALQPSKRKIETVWMDFTKEFQQIYDQLVQLSFGMSSFSKITYLREFCSSREACY
MSLVKFVKDIEDEEHPLKQIISDLESLEQHIKAEQMVKLIQSLGDEKVIVFTEYRATQYYLQWFLQQHGITSVPFRGGFK
RGKKDWMKQLFRDHAQVLIATEAGGEGINLQFCHNMINYDLPWNPMRLEQRIGRIHRFGQEKDVQIYNLVIKNTIEEHML
SLLYEKIDLFQNVIGNLDAILAELNVKSLESEMESIYNESSSSGEVRIKLDNLTSIIEQANPSDNQMEKEQKYGNP

Sequences:

>Translated_556_residues
MDSIQVNKDEQFIIDLDEAMQREENLTSWKLFSMAYEAEKQTMSPSFKGLRSVNHLSHLQILDHQREAAEQVIEEMDGRA
ILADEVGLGKTIEAGLILKEYMVRGLVSKVLILVPASLVNQWEKELNDKFFIPAIAHRKNYSWVDNHVIISSIDTAKRSP
NSEEILDIDYDLIIIDEAHKLKNEKTKNYQFVRELKKKYCLLLTATPVQNKLLELFNLISILKPGHLGNYQTFTEKYGKD
RKRMEQDPYLKQLVQKVMIRNTRKETALQPSKRKIETVWMDFTKEFQQIYDQLVQLSFGMSSFSKITYLREFCSSREACY
MSLVKFVKDIEDEEHPLKQIISDLESLEQHIKAEQMVKLIQSLGDEKVIVFTEYRATQYYLQWFLQQHGITSVPFRGGFK
RGKKDWMKQLFRDHAQVLIATEAGGEGINLQFCHNMINYDLPWNPMRLEQRIGRIHRFGQEKDVQIYNLVIKNTIEEHML
SLLYEKIDLFQNVIGNLDAILAELNVKSLESEMESIYNESSSSGEVRIKLDNLTSIIEQANPSDNQMEKEQKYGNP
>Mature_556_residues
MDSIQVNKDEQFIIDLDEAMQREENLTSWKLFSMAYEAEKQTMSPSFKGLRSVNHLSHLQILDHQREAAEQVIEEMDGRA
ILADEVGLGKTIEAGLILKEYMVRGLVSKVLILVPASLVNQWEKELNDKFFIPAIAHRKNYSWVDNHVIISSIDTAKRSP
NSEEILDIDYDLIIIDEAHKLKNEKTKNYQFVRELKKKYCLLLTATPVQNKLLELFNLISILKPGHLGNYQTFTEKYGKD
RKRMEQDPYLKQLVQKVMIRNTRKETALQPSKRKIETVWMDFTKEFQQIYDQLVQLSFGMSSFSKITYLREFCSSREACY
MSLVKFVKDIEDEEHPLKQIISDLESLEQHIKAEQMVKLIQSLGDEKVIVFTEYRATQYYLQWFLQQHGITSVPFRGGFK
RGKKDWMKQLFRDHAQVLIATEAGGEGINLQFCHNMINYDLPWNPMRLEQRIGRIHRFGQEKDVQIYNLVIKNTIEEHML
SLLYEKIDLFQNVIGNLDAILAELNVKSLESEMESIYNESSSSGEVRIKLDNLTSIIEQANPSDNQMEKEQKYGNP

Specific function: Transcription Regulator That Activates Transcription By Stimulating RNA Polymerase (Rnap) Recycling In Case Of Stress Conditions Such As Supercoiled DNA Or High Salt Concentrations. Probably Acts By Releasing The Rnap, When It Is Trapped Or Immobilized On

COG id: COG0553

COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI29244924, Length=480, Percent_Identity=27.2916666666667, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI54112403, Length=465, Percent_Identity=25.3763440860215, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI114326455, Length=463, Percent_Identity=25.0539956803456, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI282165704, Length=485, Percent_Identity=24.9484536082474, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI95147342, Length=477, Percent_Identity=25.3668763102725, Blast_Score=134, Evalue=3e-31,
Organism=Homo sapiens, GI58331268, Length=523, Percent_Identity=25.8126195028681, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI24308089, Length=468, Percent_Identity=27.1367521367521, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI118421089, Length=457, Percent_Identity=26.9146608315098, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI27477070, Length=555, Percent_Identity=23.6036036036036, Blast_Score=124, Evalue=3e-28,
Organism=Homo sapiens, GI51599156, Length=471, Percent_Identity=26.963906581741, Blast_Score=122, Evalue=7e-28,
Organism=Homo sapiens, GI164419749, Length=513, Percent_Identity=25.1461988304094, Blast_Score=121, Evalue=2e-27,
Organism=Homo sapiens, GI190358534, Length=510, Percent_Identity=26.6666666666667, Blast_Score=120, Evalue=4e-27,
Organism=Homo sapiens, GI52630322, Length=476, Percent_Identity=26.6806722689076, Blast_Score=120, Evalue=5e-27,
Organism=Homo sapiens, GI158420731, Length=476, Percent_Identity=26.6806722689076, Blast_Score=120, Evalue=5e-27,
Organism=Homo sapiens, GI52630326, Length=476, Percent_Identity=26.6806722689076, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI190358536, Length=510, Percent_Identity=26.078431372549, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI190358532, Length=510, Percent_Identity=26.078431372549, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI21071044, Length=525, Percent_Identity=24.3809523809524, Blast_Score=116, Evalue=6e-26,
Organism=Homo sapiens, GI68299795, Length=474, Percent_Identity=24.4725738396624, Blast_Score=113, Evalue=5e-25,
Organism=Homo sapiens, GI21071058, Length=511, Percent_Identity=24.0704500978474, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI4557565, Length=452, Percent_Identity=23.8938053097345, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI148612870, Length=441, Percent_Identity=24.9433106575964, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI216548193, Length=513, Percent_Identity=23.5867446393762, Blast_Score=108, Evalue=2e-23,
Organism=Homo sapiens, GI216548186, Length=513, Percent_Identity=23.5867446393762, Blast_Score=108, Evalue=2e-23,
Organism=Homo sapiens, GI192807320, Length=469, Percent_Identity=24.5202558635394, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI192807318, Length=469, Percent_Identity=24.5202558635394, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI192807316, Length=469, Percent_Identity=24.5202558635394, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI192807314, Length=469, Percent_Identity=24.5202558635394, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI192807323, Length=469, Percent_Identity=24.5202558635394, Blast_Score=98, Evalue=3e-20,
Organism=Homo sapiens, GI192807312, Length=469, Percent_Identity=24.5202558635394, Blast_Score=98, Evalue=3e-20,
Organism=Homo sapiens, GI21071056, Length=469, Percent_Identity=24.5202558635394, Blast_Score=98, Evalue=3e-20,
Organism=Homo sapiens, GI6912622, Length=196, Percent_Identity=34.1836734693878, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI21914927, Length=260, Percent_Identity=27.6923076923077, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI146219843, Length=268, Percent_Identity=26.865671641791, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI38708321, Length=82, Percent_Identity=45.1219512195122, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI40807471, Length=149, Percent_Identity=28.1879194630872, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI62860046, Length=226, Percent_Identity=26.9911504424779, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1786245, Length=535, Percent_Identity=27.1028037383178, Blast_Score=161, Evalue=9e-41,
Organism=Caenorhabditis elegans, GI193204424, Length=462, Percent_Identity=25.5411255411255, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI193203140, Length=472, Percent_Identity=28.3898305084746, Blast_Score=135, Evalue=8e-32,
Organism=Caenorhabditis elegans, GI71991518, Length=532, Percent_Identity=26.6917293233083, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17569817, Length=466, Percent_Identity=25.7510729613734, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17508659, Length=537, Percent_Identity=24.3947858472998, Blast_Score=127, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI32563629, Length=464, Percent_Identity=27.5862068965517, Blast_Score=126, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI71995707, Length=481, Percent_Identity=27.4428274428274, Blast_Score=124, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17562600, Length=459, Percent_Identity=25.0544662309368, Blast_Score=115, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI25144179, Length=457, Percent_Identity=25.601750547046, Blast_Score=111, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI71988744, Length=511, Percent_Identity=25.440313111546, Blast_Score=110, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17539642, Length=459, Percent_Identity=24.1830065359477, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17551114, Length=475, Percent_Identity=24.4210526315789, Blast_Score=103, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI25148960, Length=446, Percent_Identity=23.542600896861, Blast_Score=89, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI25148958, Length=446, Percent_Identity=23.542600896861, Blast_Score=89, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17552194, Length=446, Percent_Identity=23.542600896861, Blast_Score=89, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI115534248, Length=268, Percent_Identity=27.6119402985075, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17540630, Length=136, Percent_Identity=29.4117647058824, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17561718, Length=109, Percent_Identity=35.7798165137615, Blast_Score=67, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6325175, Length=563, Percent_Identity=24.6891651865009, Blast_Score=127, Evalue=4e-30,
Organism=Saccharomyces cerevisiae, GI6319547, Length=491, Percent_Identity=25.6619144602851, Blast_Score=126, Evalue=9e-30,
Organism=Saccharomyces cerevisiae, GI6324864, Length=472, Percent_Identity=25, Blast_Score=117, Evalue=5e-27,
Organism=Saccharomyces cerevisiae, GI6321275, Length=477, Percent_Identity=23.2704402515723, Blast_Score=115, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6321012, Length=459, Percent_Identity=25.4901960784314, Blast_Score=102, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6319722, Length=214, Percent_Identity=32.2429906542056, Blast_Score=90, Evalue=7e-19,
Organism=Saccharomyces cerevisiae, GI6322495, Length=372, Percent_Identity=23.3870967741935, Blast_Score=85, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6324879, Length=236, Percent_Identity=31.3559322033898, Blast_Score=80, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6320541, Length=179, Percent_Identity=29.0502793296089, Blast_Score=74, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6324765, Length=162, Percent_Identity=27.7777777777778, Blast_Score=70, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6321289, Length=181, Percent_Identity=27.0718232044199, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6321153, Length=181, Percent_Identity=28.7292817679558, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6319590, Length=161, Percent_Identity=26.0869565217391, Blast_Score=67, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6322065, Length=132, Percent_Identity=29.5454545454545, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI17136368, Length=495, Percent_Identity=25.6565656565657, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24666729, Length=452, Percent_Identity=25, Blast_Score=130, Evalue=3e-30,
Organism=Drosophila melanogaster, GI17986031, Length=504, Percent_Identity=25.9920634920635, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI221330583, Length=504, Percent_Identity=25.9920634920635, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI281361889, Length=562, Percent_Identity=22.7758007117438, Blast_Score=120, Evalue=3e-27,
Organism=Drosophila melanogaster, GI62472261, Length=464, Percent_Identity=25.8620689655172, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI281366478, Length=464, Percent_Identity=25.8620689655172, Blast_Score=112, Evalue=7e-25,
Organism=Drosophila melanogaster, GI24667055, Length=464, Percent_Identity=25.8620689655172, Blast_Score=112, Evalue=7e-25,
Organism=Drosophila melanogaster, GI17137266, Length=460, Percent_Identity=25, Blast_Score=110, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24653134, Length=496, Percent_Identity=24.5967741935484, Blast_Score=103, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24653132, Length=496, Percent_Identity=24.5967741935484, Blast_Score=103, Evalue=4e-22,
Organism=Drosophila melanogaster, GI17737463, Length=496, Percent_Identity=24.5967741935484, Blast_Score=103, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24581780, Length=447, Percent_Identity=23.7136465324385, Blast_Score=92, Evalue=9e-19,
Organism=Drosophila melanogaster, GI85724912, Length=169, Percent_Identity=31.9526627218935, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24583161, Length=169, Percent_Identity=31.9526627218935, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI85724914, Length=169, Percent_Identity=31.9526627218935, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24648168, Length=82, Percent_Identity=45.1219512195122, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24656962, Length=171, Percent_Identity=30.9941520467836, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24656966, Length=171, Percent_Identity=30.9941520467836, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI28573600, Length=134, Percent_Identity=32.089552238806, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24644932, Length=232, Percent_Identity=26.7241379310345, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000330 [H]

Pfam domain/function: PF00271 Helicase_C; PF00176 SNF2_N [H]

EC number: 3.6.1.- [C]

Molecular weight: Translated: 64884; Mature: 64884

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSIQVNKDEQFIIDLDEAMQREENLTSWKLFSMAYEAEKQTMSPSFKGLRSVNHLSHLQ
CCCCCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ILDHQREAAEQVIEEMDGRAILADEVGLGKTIEAGLILKEYMVRGLVSKVLILVPASLVN
HHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QWEKELNDKFFIPAIAHRKNYSWVDNHVIISSIDTAKRSPNSEEILDIDYDLIIIDEAHK
HHHHHCCCCEECCHHHHCCCCCCCCCCEEEEECHHHCCCCCCCCEEECCCCEEEECCHHH
LKNEKTKNYQFVRELKKKYCLLLTATPVQNKLLELFNLISILKPGHLGNYQTFTEKYGKD
HCCCCCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCH
RKRMEQDPYLKQLVQKVMIRNTRKETALQPSKRKIETVWMDFTKEFQQIYDQLVQLSFGM
HHHHCCCHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
SSFSKITYLREFCSSREACYMSLVKFVKDIEDEEHPLKQIISDLESLEQHIKAEQMVKLI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QSLGDEKVIVFTEYRATQYYLQWFLQQHGITSVPFRGGFKRGKKDWMKQLFRDHAQVLIA
HHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEE
TEAGGEGINLQFCHNMINYDLPWNPMRLEQRIGRIHRFGQEKDVQIYNLVIKNTIEEHML
EECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
SLLYEKIDLFQNVIGNLDAILAELNVKSLESEMESIYNESSSSGEVRIKLDNLTSIIEQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHC
NPSDNQMEKEQKYGNP
CCCHHHHHHHHHCCCC
>Mature Secondary Structure
MDSIQVNKDEQFIIDLDEAMQREENLTSWKLFSMAYEAEKQTMSPSFKGLRSVNHLSHLQ
CCCCCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ILDHQREAAEQVIEEMDGRAILADEVGLGKTIEAGLILKEYMVRGLVSKVLILVPASLVN
HHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QWEKELNDKFFIPAIAHRKNYSWVDNHVIISSIDTAKRSPNSEEILDIDYDLIIIDEAHK
HHHHHCCCCEECCHHHHCCCCCCCCCCEEEEECHHHCCCCCCCCEEECCCCEEEECCHHH
LKNEKTKNYQFVRELKKKYCLLLTATPVQNKLLELFNLISILKPGHLGNYQTFTEKYGKD
HCCCCCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCH
RKRMEQDPYLKQLVQKVMIRNTRKETALQPSKRKIETVWMDFTKEFQQIYDQLVQLSFGM
HHHHCCCHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
SSFSKITYLREFCSSREACYMSLVKFVKDIEDEEHPLKQIISDLESLEQHIKAEQMVKLI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QSLGDEKVIVFTEYRATQYYLQWFLQQHGITSVPFRGGFKRGKKDWMKQLFRDHAQVLIA
HHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEE
TEAGGEGINLQFCHNMINYDLPWNPMRLEQRIGRIHRFGQEKDVQIYNLVIKNTIEEHML
EECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
SLLYEKIDLFQNVIGNLDAILAELNVKSLESEMESIYNESSSSGEVRIKLDNLTSIIEQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHC
NPSDNQMEKEQKYGNP
CCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]