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The map label for this gene is scpB

Identifier: 23099282

GI number: 23099282

Start: 1863033

End: 1863611

Strand: Reverse

Name: scpB

Synonym: OB1827

Alternate gene names: 23099282

Gene position: 1863611-1863033 (Counterclockwise)

Preceding gene: 23099283

Following gene: 23099281

Centisome position: 51.33

GC content: 35.58

Gene sequence:

>579_bases
GTGAATATGAATGAATTTAAAGGCGTTATAGAAGGATTACTATTTGCTAGTGGCGATGAAGGTGTTACGGCAAAGCAATT
AAGCAAAATATTAGATATAGGGCTTGATACAGTAGAACATATATTAGAGGAATTACGGTTTGAATATGAGCGAGAAGACC
GTGGATTAATGATAATTCAATCCAATAATATATTTCATTTAGCCACAAAACCAGAACACAGCTCTTATTTTAAACGTTTA
ATTGATTCTCCTCGTACAAGCAAGATGTCACAAGCAGCTTTAGAAACTCTTGCTATAATAGCTTACCGTCAACCGATAAC
AAGAGCAGAGATTGATGAGATAAGAGGTGTTCGTAGTGAACGACCTGTTCAAACATTAATCACACGAAATTTGATCGAAG
AAACAGGGAGAAAAGACACAGTTGGCAGACCAGTACTATTTCAAACAAGTAAAGAATTTCTTACTTTCTTTGGATTGGCA
ACGCTGGATGATTTACCACCTCTCCCAGAAAATATTGACCCTGATAAAGAAGAACGAGAGGCAGATTTATTTTTTGAACG
ATTTCAAGATGAAGTATAA

Upstream 100 bases:

>100_bases
CATTTGTAGCAGTTCTTGAATTAATGAAGGATAAGCAAATTTATGCTGTACAGGAACGACATTTTGAAGAACTGTATTTA
TATAGCATGGAGGAATCTAC

Downstream 100 bases:

>100_bases
ATGATATTGAATCTACTAAATCCCTTTAAGGGATTTTTTTAATTCCTAAAATCTTCTTGCAGAATTATCAAATCTCTTAA
ATAAAGAATGACATAACCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MNMNEFKGVIEGLLFASGDEGVTAKQLSKILDIGLDTVEHILEELRFEYEREDRGLMIIQSNNIFHLATKPEHSSYFKRL
IDSPRTSKMSQAALETLAIIAYRQPITRAEIDEIRGVRSERPVQTLITRNLIEETGRKDTVGRPVLFQTSKEFLTFFGLA
TLDDLPPLPENIDPDKEEREADLFFERFQDEV

Sequences:

>Translated_192_residues
MNMNEFKGVIEGLLFASGDEGVTAKQLSKILDIGLDTVEHILEELRFEYEREDRGLMIIQSNNIFHLATKPEHSSYFKRL
IDSPRTSKMSQAALETLAIIAYRQPITRAEIDEIRGVRSERPVQTLITRNLIEETGRKDTVGRPVLFQTSKEFLTFFGLA
TLDDLPPLPENIDPDKEEREADLFFERFQDEV
>Mature_192_residues
MNMNEFKGVIEGLLFASGDEGVTAKQLSKILDIGLDTVEHILEELRFEYEREDRGLMIIQSNNIFHLATKPEHSSYFKRL
IDSPRTSKMSQAALETLAIIAYRQPITRAEIDEIRGVRSERPVQTLITRNLIEETGRKDTVGRPVLFQTSKEFLTFFGLA
TLDDLPPLPENIDPDKEEREADLFFERFQDEV

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpA that pull DNA away from mid-cell into both cell halves

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SCPB_OCEIH (Q8EQ83)

Other databases:

- EMBL:   BA000028
- RefSeq:   NP_692748.1
- ProteinModelPortal:   Q8EQ83
- SMR:   Q8EQ83
- GeneID:   1018321
- GenomeReviews:   BA000028_GR
- KEGG:   oih:OB1827
- NMPDR:   fig|221109.1.peg.1828
- HOGENOM:   HBG752450
- OMA:   NILEEMQ
- BioCyc:   OIHE221109:OB1827-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01804
- InterPro:   IPR005234
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- PIRSF:   PIRSF019345
- TIGRFAMs:   TIGR00281

Pfam domain/function: PF04079 DUF387

EC number: NA

Molecular weight: Translated: 22074; Mature: 22074

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMNEFKGVIEGLLFASGDEGVTAKQLSKILDIGLDTVEHILEELRFEYEREDRGLMIIQ
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEE
SNNIFHLATKPEHSSYFKRLIDSPRTSKMSQAALETLAIIAYRQPITRAEIDEIRGVRSE
CCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
RPVQTLITRNLIEETGRKDTVGRPVLFQTSKEFLTFFGLATLDDLPPLPENIDPDKEERE
CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
ADLFFERFQDEV
HHHHHHHHHCCC
>Mature Secondary Structure
MNMNEFKGVIEGLLFASGDEGVTAKQLSKILDIGLDTVEHILEELRFEYEREDRGLMIIQ
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEE
SNNIFHLATKPEHSSYFKRLIDSPRTSKMSQAALETLAIIAYRQPITRAEIDEIRGVRSE
CCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
RPVQTLITRNLIEETGRKDTVGRPVLFQTSKEFLTFFGLATLDDLPPLPENIDPDKEERE
CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
ADLFFERFQDEV
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376