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The map label for this gene is yphF [H]

Identifier: 23099249

GI number: 23099249

Start: 1830205

End: 1830981

Strand: Reverse

Name: yphF [H]

Synonym: OB1794

Alternate gene names: 23099249

Gene position: 1830981-1830205 (Counterclockwise)

Preceding gene: 23099250

Following gene: 23099248

Centisome position: 50.43

GC content: 32.43

Gene sequence:

>777_bases
ATGTCGTATTTAGTGGACCTACAAGATAATGATAAGGAGTCTTATATTATGAAAAACCGTACATATTTGTTAATACCAAT
TATATTTCTTACATTCATACTTACTGGATGTCTTTACCCGCAAAGTGAGAAATCAGAGAATCAAATACCTTATGAAGAAC
AACTACAGACGGTACAGCAATCGGTAAATAGTTATAAAGAAGGAGAAAATGGACTTGTTCCAATTCGAACAAAGGACAAT
GATACTCCAGAATTCGAAAAATATTTAATTGATTTCAGTAAACTTCGTGAAAACGGTTATTTATCGGAGCCTCCTGGGAA
CTCTTTTGAAAAGGGAGGCGTTTATCAATATACTTTGTTGAATCCAGAAGAGGATCCAACAGTTAAGTTAATTGATTTAC
GTATTACGGAAGAAATTCGCCGTGTCAATGTGCAATTAGACTTTTATAGACAGGAAAATTATTACCCTGCTTTCGGAGAA
AAATTAACGGACAAGTATTACACTATTGATTATAATAAATTAGATCTTGAAGAAGCACCAACAGTTACTAGTCCTTATTC
GCAAGAAGAATTGCCAATTATTATGGATTTAGATGGAAATCTTTTTGTTGATTATTCCTATGACTTAAACAAAGCTTTAC
AAGAATATAATCATGAGTATTCTGAAGGTGAAGATATTCGATACCTATTAACCGACCATTCTCCATTTGTTCCTGCATAT
TCTGTTCCATATACCGTAAAAGATAATCAAGCTATTTTTTTAGATGAGATGGAATAA

Upstream 100 bases:

>100_bases
CTGATTGTTTGGAGCAGAAGTAAACTACGCGGTTGGGTACAGGTAGTGGTATCGTTACTTGCTTACCTCTGTTTAATTAG
TGGAGGATTTATTATCCTGT

Downstream 100 bases:

>100_bases
AAAAACCCTTGTAGCAATATATATTGTTGCAAGGGTTTTTTATATTTATATCGATGATGTACCTGTATGGAAAAAATATA
TTAAAAATATTGGCAAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MSYLVDLQDNDKESYIMKNRTYLLIPIIFLTFILTGCLYPQSEKSENQIPYEEQLQTVQQSVNSYKEGENGLVPIRTKDN
DTPEFEKYLIDFSKLRENGYLSEPPGNSFEKGGVYQYTLLNPEEDPTVKLIDLRITEEIRRVNVQLDFYRQENYYPAFGE
KLTDKYYTIDYNKLDLEEAPTVTSPYSQEELPIIMDLDGNLFVDYSYDLNKALQEYNHEYSEGEDIRYLLTDHSPFVPAY
SVPYTVKDNQAIFLDEME

Sequences:

>Translated_258_residues
MSYLVDLQDNDKESYIMKNRTYLLIPIIFLTFILTGCLYPQSEKSENQIPYEEQLQTVQQSVNSYKEGENGLVPIRTKDN
DTPEFEKYLIDFSKLRENGYLSEPPGNSFEKGGVYQYTLLNPEEDPTVKLIDLRITEEIRRVNVQLDFYRQENYYPAFGE
KLTDKYYTIDYNKLDLEEAPTVTSPYSQEELPIIMDLDGNLFVDYSYDLNKALQEYNHEYSEGEDIRYLLTDHSPFVPAY
SVPYTVKDNQAIFLDEME
>Mature_257_residues
SYLVDLQDNDKESYIMKNRTYLLIPIIFLTFILTGCLYPQSEKSENQIPYEEQLQTVQQSVNSYKEGENGLVPIRTKDND
TPEFEKYLIDFSKLRENGYLSEPPGNSFEKGGVYQYTLLNPEEDPTVKLIDLRITEEIRRVNVQLDFYRQENYYPAFGEK
LTDKYYTIDYNKLDLEEAPTVTSPYSQEELPIIMDLDGNLFVDYSYDLNKALQEYNHEYSEGEDIRYLLTDHSPFVPAYS
VPYTVKDNQAIFLDEME

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30331; Mature: 30200

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYLVDLQDNDKESYIMKNRTYLLIPIIFLTFILTGCLYPQSEKSENQIPYEEQLQTVQQ
CCEEEECCCCCCCEEEEECCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
SVNSYKEGENGLVPIRTKDNDTPEFEKYLIDFSKLRENGYLSEPPGNSFEKGGVYQYTLL
HHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEE
NPEEDPTVKLIDLRITEEIRRVNVQLDFYRQENYYPAFGEKLTDKYYTIDYNKLDLEEAP
CCCCCCCEEEEEEEEHHHHHEEEEEEEEEECCCCCCCHHHHHCCCEEEEECCEECCCCCC
TVTSPYSQEELPIIMDLDGNLFVDYSYDLNKALQEYNHEYSEGEDIRYLLTDHSPFVPAY
CCCCCCCCCCCCEEEECCCCEEEEECCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCC
SVPYTVKDNQAIFLDEME
CCCEEECCCCEEEEEECC
>Mature Secondary Structure 
SYLVDLQDNDKESYIMKNRTYLLIPIIFLTFILTGCLYPQSEKSENQIPYEEQLQTVQQ
CEEEECCCCCCCEEEEECCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
SVNSYKEGENGLVPIRTKDNDTPEFEKYLIDFSKLRENGYLSEPPGNSFEKGGVYQYTLL
HHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEE
NPEEDPTVKLIDLRITEEIRRVNVQLDFYRQENYYPAFGEKLTDKYYTIDYNKLDLEEAP
CCCCCCCEEEEEEEEHHHHHEEEEEEEEEECCCCCCCHHHHHCCCEEEEECCEECCCCCC
TVTSPYSQEELPIIMDLDGNLFVDYSYDLNKALQEYNHEYSEGEDIRYLLTDHSPFVPAY
CCCCCCCCCCCCEEEECCCCEEEEECCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCC
SVPYTVKDNQAIFLDEME
CCCEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377; 1729246 [H]