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The map label for this gene is qcrB [H]

Identifier: 23099230

GI number: 23099230

Start: 1813049

End: 1813723

Strand: Reverse

Name: qcrB [H]

Synonym: OB1775

Alternate gene names: 23099230

Gene position: 1813723-1813049 (Counterclockwise)

Preceding gene: 23099231

Following gene: 23099229

Centisome position: 49.96

GC content: 38.37

Gene sequence:

>675_bases
ATGTTACAAAAGATTTATGATTGGATCGACGATCGCATTGATATTACGCCGATATGGCGCGATATCGCTGATCACGAAGT
GCCGGAACATGTTAATCCTGCACATCATTTTTCCGCATTTGTTTACTGTTTCGGAGGATTAACATTTTTCGTAGTAGTCA
TTCAAATTTTATCTGGTATGTTCTTAACAATGTATTATGTTCCAGATATTGAGAATGCATGGAAATCTGTTTATTACTTG
CAAACAGAAGTTGCACATGGACAAATTGTACGTGGGATGCACCACTGGGGTGCCAGTGTTGTTATCGTAATGCTATTACT
ACATACTTTACGTGTGTTTTTCCAAGGTGCATACAAGAAGCCACGTGAACTTAACTGGATGGTCGGAGTGCTTATATTCT
TTGTAATGTTAGGCTTAGGTTTTACAGGTTACTTATTACCATGGGATAACAAAGCATACTTCGCAACTCAGGTTGGTCTA
GAAATTGCAGAACAAGTACCGTTTATTGGAGAACAATTAAAAACATTGCTAGCTGGAGATGCAACGATTGTAGGAGCGCA
AACATTAACTAGGTTCTTTGCAATCCACGTATTCTTCTTACCAGGTGCATTATTTGCACTATTAGCAGTTCACTTTATTC
TAATCCGTAGACAAGGTATTTCCGGACCACTATAA

Upstream 100 bases:

>100_bases
GTACACCACCATTACAACCATTAGATGTTTATGAACAGGAAGTAAGGGATGGCATGCTATTCCTAGGCGAAGCAAAACCA
TACGGGGAGGCGTAAAAACA

Downstream 100 bases:

>100_bases
AAAGGAGGGCAACCAATGCATAAGGGTAAAGGTATGAAATTCGTTGGAGATTCTCGTATTTCCGCGGAGAGAAAACCAAA
TGTACCGAAAGATTATTCGG

Product: cytochrome b6

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MLQKIYDWIDDRIDITPIWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYL
QTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYKKPRELNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGL
EIAEQVPFIGEQLKTLLAGDATIVGAQTLTRFFAIHVFFLPGALFALLAVHFILIRRQGISGPL

Sequences:

>Translated_224_residues
MLQKIYDWIDDRIDITPIWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYL
QTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYKKPRELNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGL
EIAEQVPFIGEQLKTLLAGDATIVGAQTLTRFFAIHVFFLPGALFALLAVHFILIRRQGISGPL
>Mature_224_residues
MLQKIYDWIDDRIDITPIWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYL
QTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYKKPRELNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGL
EIAEQVPFIGEQLKTLLAGDATIVGAQTLTRFFAIHVFFLPGALFALLAVHFILIRRQGISGPL

Specific function: Component of the menaquinol-cytochrome c reductase complex [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=183, Percent_Identity=31.6939890710383, Blast_Score=106, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6226529, Length=203, Percent_Identity=30.0492610837438, Blast_Score=98, Evalue=9e-22,
Organism=Saccharomyces cerevisiae, GI6226532, Length=203, Percent_Identity=30.0492610837438, Blast_Score=97, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6226531, Length=158, Percent_Identity=29.746835443038, Blast_Score=79, Evalue=8e-16,
Organism=Saccharomyces cerevisiae, GI6226530, Length=123, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.-

Molecular weight: Translated: 25548; Mature: 25548

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS51002 CYTB_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQKIYDWIDDRIDITPIWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFVVVIQILSGM
CHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLTMYYVPDIENAWKSVYYLQTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYKK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PRELNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLEIAEQVPFIGEQLKTLLAGD
CHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC
ATIVGAQTLTRFFAIHVFFLPGALFALLAVHFILIRRQGISGPL
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLQKIYDWIDDRIDITPIWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFVVVIQILSGM
CHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLTMYYVPDIENAWKSVYYLQTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYKK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PRELNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLEIAEQVPFIGEQLKTLLAGD
CHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC
ATIVGAQTLTRFFAIHVFFLPGALFALLAVHFILIRRQGISGPL
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7592464; 8760912; 9384377 [H]