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The map label for this gene is qcrC [H]

Identifier: 23099229

GI number: 23099229

Start: 1812260

End: 1813033

Strand: Reverse

Name: qcrC [H]

Synonym: OB1774

Alternate gene names: 23099229

Gene position: 1813033-1812260 (Counterclockwise)

Preceding gene: 23099230

Following gene: 23099228

Centisome position: 49.94

GC content: 41.34

Gene sequence:

>774_bases
ATGCATAAGGGTAAAGGTATGAAATTCGTTGGAGATTCTCGTATTTCCGCGGAGAGAAAACCAAATGTACCGAAAGATTA
TTCGGAGTATCCTGGTAGAACTGAAGCGTTTTGGCCCAACTTTTTATTAAAAGAATGGTTGGCTGGAGCAGTATTCCTAG
TTGGTTTCTTGTGTTTAACACTAGCGCATCCATCTCCTCTAGAAGGAGTGGCTGACCCAACTGACGCTGCGTATATACCT
CTACCAGATTGGTACTTTTTATTCTTGTACGAGTTATTGAAATATGAATTTGCTAGTGGAGATTGGACATTAATGGGTAT
TCTTGTTTTACCTGGTATCGCGTTTGGTGCGTTATTACTTGCTCCATTCCTTGATACAGGACCAGGTAGACGTCCACGTC
AACGACCTATTGCAGTAGGTATGATGCTAGTTGGTCTAGCTTCTGTTATTTGGTTAACGTATACTTCAGCTGCAGTAGTT
GATTGGGAAGGGCGTGCTGAAGCAAATAAGCCTGTTCCAGAATCTGAAGTATCCATAGATACAGAACATCCAGGCTATGC
GGCATACGAAAATAGCTGTTTGTCTTGTCATGGTGGGGAACTTGAAGGTGGTGCAGGACCTACTCTAGTTGGAATTGATT
ATTCTAAAGAAGAAATAATGACAATTGCAACGGATGGTATCGGTTCCATGCCTGCTGACCAGTTCCAAGGATCTGAAGAG
GAATTAGAACAATTAGCTGAATTTATCATCTCAGTAAATGAAGAAACTGAATAA

Upstream 100 bases:

>100_bases
ATTCTTCTTACCAGGTGCATTATTTGCACTATTAGCAGTTCACTTTATTCTAATCCGTAGACAAGGTATTTCCGGACCAC
TATAAAAAGGAGGGCAACCA

Downstream 100 bases:

>100_bases
AGAGTAGAAAACACCTTTGCCTTCCATAGGTAAAGGTGTTTTTCCACATAAAGAGAGGCATCATTATTATGATTCGATAC
ATATTACAAGACAAAAGATT

Product: menaquinol-cytochrome-c reductase cytochrome b:c subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MHKGKGMKFVGDSRISAERKPNVPKDYSEYPGRTEAFWPNFLLKEWLAGAVFLVGFLCLTLAHPSPLEGVADPTDAAYIP
LPDWYFLFLYELLKYEFASGDWTLMGILVLPGIAFGALLLAPFLDTGPGRRPRQRPIAVGMMLVGLASVIWLTYTSAAVV
DWEGRAEANKPVPESEVSIDTEHPGYAAYENSCLSCHGGELEGGAGPTLVGIDYSKEEIMTIATDGIGSMPADQFQGSEE
ELEQLAEFIISVNEETE

Sequences:

>Translated_257_residues
MHKGKGMKFVGDSRISAERKPNVPKDYSEYPGRTEAFWPNFLLKEWLAGAVFLVGFLCLTLAHPSPLEGVADPTDAAYIP
LPDWYFLFLYELLKYEFASGDWTLMGILVLPGIAFGALLLAPFLDTGPGRRPRQRPIAVGMMLVGLASVIWLTYTSAAVV
DWEGRAEANKPVPESEVSIDTEHPGYAAYENSCLSCHGGELEGGAGPTLVGIDYSKEEIMTIATDGIGSMPADQFQGSEE
ELEQLAEFIISVNEETE
>Mature_257_residues
MHKGKGMKFVGDSRISAERKPNVPKDYSEYPGRTEAFWPNFLLKEWLAGAVFLVGFLCLTLAHPSPLEGVADPTDAAYIP
LPDWYFLFLYELLKYEFASGDWTLMGILVLPGIAFGALLLAPFLDTGPGRRPRQRPIAVGMMLVGLASVIWLTYTSAAVV
DWEGRAEANKPVPESEVSIDTEHPGYAAYENSCLSCHGGELEGGAGPTLVGIDYSKEEIMTIATDGIGSMPADQFQGSEE
ELEQLAEFIISVNEETE

Specific function: Component of the menaquinol-cytochrome c reductase complex [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR009056
- InterPro:   IPR012049 [H]

Pfam domain/function: PF00032 Cytochrom_B_C [H]

EC number: 1.10.2.-

Molecular weight: Translated: 28085; Mature: 28085

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: PS51007 CYTC ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKGKGMKFVGDSRISAERKPNVPKDYSEYPGRTEAFWPNFLLKEWLAGAVFLVGFLCLT
CCCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LAHPSPLEGVADPTDAAYIPLPDWYFLFLYELLKYEFASGDWTLMGILVLPGIAFGALLL
HCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
APFLDTGPGRRPRQRPIAVGMMLVGLASVIWLTYTSAAVVDWEGRAEANKPVPESEVSID
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCEEC
TEHPGYAAYENSCLSCHGGELEGGAGPTLVGIDYSKEEIMTIATDGIGSMPADQFQGSEE
CCCCCCHHHCCCEEECCCCCCCCCCCCEEEECCCCHHHEEEEECCCCCCCCHHHHCCCHH
ELEQLAEFIISVNEETE
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MHKGKGMKFVGDSRISAERKPNVPKDYSEYPGRTEAFWPNFLLKEWLAGAVFLVGFLCLT
CCCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LAHPSPLEGVADPTDAAYIPLPDWYFLFLYELLKYEFASGDWTLMGILVLPGIAFGALLL
HCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
APFLDTGPGRRPRQRPIAVGMMLVGLASVIWLTYTSAAVVDWEGRAEANKPVPESEVSID
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCEEC
TEHPGYAAYENSCLSCHGGELEGGAGPTLVGIDYSKEEIMTIATDGIGSMPADQFQGSEE
CCCCCCHHHCCCEEECCCCCCCCCCCCEEEECCCCHHHEEEEECCCCCCCCHHHHCCCHH
ELEQLAEFIISVNEETE
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8647852 [H]