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The map label for this gene is flgC [H]

Identifier: 23099008

GI number: 23099008

Start: 1596272

End: 1596727

Strand: Direct

Name: flgC [H]

Synonym: OB1553

Alternate gene names: 23099008

Gene position: 1596272-1596727 (Clockwise)

Preceding gene: 23099007

Following gene: 23099009

Centisome position: 43.97

GC content: 36.84

Gene sequence:

>456_bases
ATGTCCATATTTAATTCTATGAACACAAGTGCGAGTGGATTAACTGCACAGCGATTAAGGATGGATATTGTATCTTCTAA
CGTTGCCAATGCACAATCTACTAGAGCAACGATAAATGAGGATGGAGAATTTGAACCATATCGAAGAAAGATGGTTACTT
TACAATCCGAACAAAATCAGTTTAAAAATGTCTTGAAACATGCAACGTCATCTTCGTCTACATCAACATCAGGTGTAAAA
GCAACATCTATTACGGAGGATAATACTCCATTTAATTTAGTGTATAATCCGCAACATCCGGATGCGAATGAACAAGGGTA
TGTAGAGATGCCAAATGTGGATCCGTTAAAAGAAATGGTTGACTTAATGAGTGCGACCAGATCCTATGAGGCAAATATAA
CAGCCTTTAATGCTAGTAAAGGTATGTTGATGAAGGCATTAGAAATTGGTAAGTAG

Upstream 100 bases:

>100_bases
GCGGAACTTGCCAAAAATCAAATTTACTATAACGGATTGATAGATCGAATAAATGGTAAGTTTGGCAGTTTGCAAACTGT
AATAAGAGGAGGTAACTAGA

Downstream 100 bases:

>100_bases
ATAAGGAGAGAATGAAATGACGATATCAATAATGGGGAATAATGTTACTCCGATTCAACCCAATGAATCAGTCAATCAAG
TAAAACGTTCACCTAGTGAA

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MSIFNSMNTSASGLTAQRLRMDIVSSNVANAQSTRATINEDGEFEPYRRKMVTLQSEQNQFKNVLKHATSSSSTSTSGVK
ATSITEDNTPFNLVYNPQHPDANEQGYVEMPNVDPLKEMVDLMSATRSYEANITAFNASKGMLMKALEIGK

Sequences:

>Translated_151_residues
MSIFNSMNTSASGLTAQRLRMDIVSSNVANAQSTRATINEDGEFEPYRRKMVTLQSEQNQFKNVLKHATSSSSTSTSGVK
ATSITEDNTPFNLVYNPQHPDANEQGYVEMPNVDPLKEMVDLMSATRSYEANITAFNASKGMLMKALEIGK
>Mature_150_residues
SIFNSMNTSASGLTAQRLRMDIVSSNVANAQSTRATINEDGEFEPYRRKMVTLQSEQNQFKNVLKHATSSSSTSTSGVKA
TSITEDNTPFNLVYNPQHPDANEQGYVEMPNVDPLKEMVDLMSATRSYEANITAFNASKGMLMKALEIGK

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=151, Percent_Identity=39.0728476821192, Blast_Score=110, Evalue=4e-26,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 16621; Mature: 16490

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIFNSMNTSASGLTAQRLRMDIVSSNVANAQSTRATINEDGEFEPYRRKMVTLQSEQNQ
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
FKNVLKHATSSSSTSTSGVKATSITEDNTPFNLVYNPQHPDANEQGYVEMPNVDPLKEMV
HHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCEEECCCCCHHHHHH
DLMSATRSYEANITAFNASKGMLMKALEIGK
HHHHHHCCCCCEEEEEECCCCHHHHHHHCCC
>Mature Secondary Structure 
SIFNSMNTSASGLTAQRLRMDIVSSNVANAQSTRATINEDGEFEPYRRKMVTLQSEQNQ
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
FKNVLKHATSSSSTSTSGVKATSITEDNTPFNLVYNPQHPDANEQGYVEMPNVDPLKEMV
HHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCEEECCCCCHHHHHH
DLMSATRSYEANITAFNASKGMLMKALEIGK
HHHHHHCCCCCEEEEEECCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1905667; 9384377 [H]