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The map label for this gene is ydfS [H]

Identifier: 23098832

GI number: 23098832

Start: 1426422

End: 1427279

Strand: Reverse

Name: ydfS [H]

Synonym: OB1377

Alternate gene names: 23098832

Gene position: 1427279-1426422 (Counterclockwise)

Preceding gene: 23098833

Following gene: 23098823

Centisome position: 39.31

GC content: 34.85

Gene sequence:

>858_bases
ATGCCAGAATGGACAATTGTAATATTTCGATCCCTCACCTTGATTATTATTCTTTTCCTTTTAGTAAAGTGGCTTGGTAC
AAAACAGATATCACAATTTAATATTTTTGAGACCATTACAGGCATTGTGCTAGGAGGAATCGCTGCCGTCCATACCATGG
ATCCAAGTACTAATTTTTATTATGCACTGCTTGCTATGTTTATCTGGTTTATCGTGCCTTATGGAATGGAAAAGCTCTCC
TTAAAAAGTAAACGAGTTCGAGATTTTACAGAGGGAAAAAGCACTGTATTTATACAAGATGGAAAAATAATGGAAGATAA
TTTGAAAAAAGAAGGGTACTCTACTGATGAATTGATGGAAAAACTAAGAGATAATAATGTTTTCTTAGCATCCGATGTAG
AATTTGCTGTACTAGAGCCTTCTGGTACATTCAATATACTTCCTAAAAAAGAAAACCGACCTTTAACAGCGAAAGATTTA
GGAATAGCAGTAGCGCCTGATAAAGAACCGCAAACAGTCATTATGGATGGCAATATCATGTTAGAACCATTAGCAAATGC
TGCTTTAAATCCAGAATGGCTTCATACAGAACTTGAAAAGCAAAATATCACACTAGAAAATGTATTCCTAGGACAAGTAG
ACCATCAAGGTCAATTGTACGTGGATCTTTACGACGATCATCTAGCAGTGGCGACTCCAAATCAATCTGCTTTACTATTA
GCAAAGATAAAAAAATCACAAGCAGATTTAGAACTTTTTGCCTTAGCAACAGATAATCCCACTTCAAAAGCTATTTATCA
AGCTTGTAGTGAAAAAATGAACAAAGTCAAGCGTATTCTAGAACCTCATTTAAATTAA

Upstream 100 bases:

>100_bases
AAGCAAATATACTTTTAGAAGAAGTAAAAAATGATATGAACAATCAAGTAATAAAATTGACAAAAGAGGAACCACAATAT
AAATCATAGGAGGATGTCAT

Downstream 100 bases:

>100_bases
GAAAGACTACTATAAGTGTTAATTGATAATCAAGATTAGAATTAAATTCCGCTCGTCCATGGACTGGTCAGTATCGGGTT
GCTCATATGCCGGTATCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MPEWTIVIFRSLTLIIILFLLVKWLGTKQISQFNIFETITGIVLGGIAAVHTMDPSTNFYYALLAMFIWFIVPYGMEKLS
LKSKRVRDFTEGKSTVFIQDGKIMEDNLKKEGYSTDELMEKLRDNNVFLASDVEFAVLEPSGTFNILPKKENRPLTAKDL
GIAVAPDKEPQTVIMDGNIMLEPLANAALNPEWLHTELEKQNITLENVFLGQVDHQGQLYVDLYDDHLAVATPNQSALLL
AKIKKSQADLELFALATDNPTSKAIYQACSEKMNKVKRILEPHLN

Sequences:

>Translated_285_residues
MPEWTIVIFRSLTLIIILFLLVKWLGTKQISQFNIFETITGIVLGGIAAVHTMDPSTNFYYALLAMFIWFIVPYGMEKLS
LKSKRVRDFTEGKSTVFIQDGKIMEDNLKKEGYSTDELMEKLRDNNVFLASDVEFAVLEPSGTFNILPKKENRPLTAKDL
GIAVAPDKEPQTVIMDGNIMLEPLANAALNPEWLHTELEKQNITLENVFLGQVDHQGQLYVDLYDDHLAVATPNQSALLL
AKIKKSQADLELFALATDNPTSKAIYQACSEKMNKVKRILEPHLN
>Mature_284_residues
PEWTIVIFRSLTLIIILFLLVKWLGTKQISQFNIFETITGIVLGGIAAVHTMDPSTNFYYALLAMFIWFIVPYGMEKLSL
KSKRVRDFTEGKSTVFIQDGKIMEDNLKKEGYSTDELMEKLRDNNVFLASDVEFAVLEPSGTFNILPKKENRPLTAKDLG
IAVAPDKEPQTVIMDGNIMLEPLANAALNPEWLHTELEKQNITLENVFLGQVDHQGQLYVDLYDDHLAVATPNQSALLLA
KIKKSQADLELFALATDNPTSKAIYQACSEKMNKVKRILEPHLN

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 32162; Mature: 32031

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEWTIVIFRSLTLIIILFLLVKWLGTKQISQFNIFETITGIVLGGIAAVHTMDPSTNFY
CCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCHH
YALLAMFIWFIVPYGMEKLSLKSKRVRDFTEGKSTVFIQDGKIMEDNLKKEGYSTDELME
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCEEEHHHHHCCCCCHHHHHH
KLRDNNVFLASDVEFAVLEPSGTFNILPKKENRPLTAKDLGIAVAPDKEPQTVIMDGNIM
HHCCCCEEEECCCEEEEECCCCCEEEEECCCCCCCCHHHCCEEECCCCCCCEEEEECCEE
LEPLANAALNPEWLHTELEKQNITLENVFLGQVDHQGQLYVDLYDDHLAVATPNQSALLL
EECHHCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCEEEEEEECCEEEEECCCCCEEEE
AKIKKSQADLELFALATDNPTSKAIYQACSEKMNKVKRILEPHLN
EEHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PEWTIVIFRSLTLIIILFLLVKWLGTKQISQFNIFETITGIVLGGIAAVHTMDPSTNFY
CCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCHH
YALLAMFIWFIVPYGMEKLSLKSKRVRDFTEGKSTVFIQDGKIMEDNLKKEGYSTDELME
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCEEEHHHHHCCCCCHHHHHH
KLRDNNVFLASDVEFAVLEPSGTFNILPKKENRPLTAKDLGIAVAPDKEPQTVIMDGNIM
HHCCCCEEEECCCEEEEECCCCCEEEEECCCCCCCCHHHCCEEECCCCCCCEEEEECCEE
LEPLANAALNPEWLHTELEKQNITLENVFLGQVDHQGQLYVDLYDDHLAVATPNQSALLL
EECHHCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCEEEEEEECCEEEEECCCCCEEEE
AKIKKSQADLELFALATDNPTSKAIYQACSEKMNKVKRILEPHLN
EEHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]