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The map label for this gene is ytcJ [H]

Identifier: 23098796

GI number: 23098796

Start: 1383167

End: 1384762

Strand: Reverse

Name: ytcJ [H]

Synonym: OB1341

Alternate gene names: 23098796

Gene position: 1384762-1383167 (Counterclockwise)

Preceding gene: 23098801

Following gene: 23098795

Centisome position: 38.14

GC content: 38.91

Gene sequence:

>1596_bases
ATGATAAAACTGTATATTAATGGTGTAATACATACATTTCAATCAAGTTATCCCATTGTCGAAGCAGTAGCAGTCGAAAA
TAATTGTTTTATAGACATCGGTACAACAAAAGACATGTTATTAAACTGGAAAGCTAAAAGTTCGGAGATCATAGATTTAC
AAGGATTGACAGTAACTCCTGGGTTAACAGATAGTCACCTACATCTCTCTATGGTAGCAAGCAAATTCGTAGATTTAGAT
GTAACAGGGGTAACTTCCAAACAAGATATGCTTGAGTATATTCGTCGGCATTCCCATACATTAAAGCCTGGAGAATGGCT
TCTTGGAAGTGGATGGGATGAGAATCTATTTACTGATGGAGGTATTCCTACCTTAGATGAACTAGATCAAGTTGCTCCAC
TTAATCCATTGTATATTACTAGAATATGTGAACACGCAGCAGTCGTTAATTCCAAATCTTTAGAAACAATTAATTATTCT
AAGGACATATCTGTTCCTGAAGGTGGTAAAATCGTTGTTGATTCTACTTCCCTCAAACCAACGGGATTAATATTAGAGTC
AGCTTCTATTTTATTCCAAGAACACATTCCAGAAAAATCGTACGAAACCTGGAAAAACGCATTACGAAAAACAATAAAAG
CTACGATACAGCATGGTATAACAAGTGTTCACTCTAACGATCCCTTGTACCTAGGCGGGCTTAAACAAACCTATCAATTA
TTCGATGAACTATTAAATAAAGAACAACTCGGTTTACGAACAAATCTATTAATAAACCATGAATTTCTAGAAGACCTAGA
AGCGATGAATATGTACACAGGGTATGGGAATGATACGTTACAAATTGGAGCAATTAAAATCTTCGCAGATGGTGCTTTTG
GACGGCGAACTGCTCTTTTACGTGAACCGTATCACGACAGTCCTAGCCAATATGGCGAGGCCATGTTCTCACAAGAAACG
CTCTACGACATCGTTAGAAGAGCACGTGAACGTGGCATGCCGGTTGCCGTACATACCATTGGCGATCAAGCGCTCATAAA
TGTATTAGATATATTAGATCAATTTCCTCCTTCTGAATTTCGCGACCGACTGATACACGTTCAAGTGGTAAATGATAACC
TGGTAAAACGGTTAGCAAGTAATCACCGAATCGCAGATATACAGCCTAGATTTCTAGCAAGTGATTACCCTTGGGTAAAA
GATCGACTAGGTGAAGAACGGATGCCAATGGCATATGCGTGGAAGACTTTACTAGATAACGGAGTAATATGTGGTGGTGG
ATCCGATGCTCCAGTGGAACCGATGAACCCATTACTTGGTATACATGCCGCAGTAACAAGAAGAGCTCCCGGAGAAGACC
ATGAAGGTTGGTACAAAGAACAAAAACTTTCCATGTACGAAGCCTTTCGTTTATTTACAGAGCAAGCGGCTTACACGACG
AATGAAGAACATAAAAAAGGAACAATCGAACCTGGAAAGCTAGCAGATATGACCGTATATTCCAATAATCCATTTCAAAT
GAATCATCCGGATGATCTATTCCAAACCTCTATAGAAATGACGATTATTGGAGGAGAAATCAAATACAGCCGATAA

Upstream 100 bases:

>100_bases
CATGTAGGAAATGCAGAGCTTATAGGAACAAGGATAGATGGCTATCGTTGTTTTTTTGTGTATAACTATAATTTTACTTT
CACAAGTAAGGAGCATGGCC

Downstream 100 bases:

>100_bases
AAGGAGTTGTAATTACGAATGAAACATAAACGCATTCATCCATTAATTATTATTGCCCTTTTTCTATCTTCTATAGCAAA
TGGTTTAAATGCTTATCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MIKLYINGVIHTFQSSYPIVEAVAVENNCFIDIGTTKDMLLNWKAKSSEIIDLQGLTVTPGLTDSHLHLSMVASKFVDLD
VTGVTSKQDMLEYIRRHSHTLKPGEWLLGSGWDENLFTDGGIPTLDELDQVAPLNPLYITRICEHAAVVNSKSLETINYS
KDISVPEGGKIVVDSTSLKPTGLILESASILFQEHIPEKSYETWKNALRKTIKATIQHGITSVHSNDPLYLGGLKQTYQL
FDELLNKEQLGLRTNLLINHEFLEDLEAMNMYTGYGNDTLQIGAIKIFADGAFGRRTALLREPYHDSPSQYGEAMFSQET
LYDIVRRARERGMPVAVHTIGDQALINVLDILDQFPPSEFRDRLIHVQVVNDNLVKRLASNHRIADIQPRFLASDYPWVK
DRLGEERMPMAYAWKTLLDNGVICGGGSDAPVEPMNPLLGIHAAVTRRAPGEDHEGWYKEQKLSMYEAFRLFTEQAAYTT
NEEHKKGTIEPGKLADMTVYSNNPFQMNHPDDLFQTSIEMTIIGGEIKYSR

Sequences:

>Translated_531_residues
MIKLYINGVIHTFQSSYPIVEAVAVENNCFIDIGTTKDMLLNWKAKSSEIIDLQGLTVTPGLTDSHLHLSMVASKFVDLD
VTGVTSKQDMLEYIRRHSHTLKPGEWLLGSGWDENLFTDGGIPTLDELDQVAPLNPLYITRICEHAAVVNSKSLETINYS
KDISVPEGGKIVVDSTSLKPTGLILESASILFQEHIPEKSYETWKNALRKTIKATIQHGITSVHSNDPLYLGGLKQTYQL
FDELLNKEQLGLRTNLLINHEFLEDLEAMNMYTGYGNDTLQIGAIKIFADGAFGRRTALLREPYHDSPSQYGEAMFSQET
LYDIVRRARERGMPVAVHTIGDQALINVLDILDQFPPSEFRDRLIHVQVVNDNLVKRLASNHRIADIQPRFLASDYPWVK
DRLGEERMPMAYAWKTLLDNGVICGGGSDAPVEPMNPLLGIHAAVTRRAPGEDHEGWYKEQKLSMYEAFRLFTEQAAYTT
NEEHKKGTIEPGKLADMTVYSNNPFQMNHPDDLFQTSIEMTIIGGEIKYSR
>Mature_531_residues
MIKLYINGVIHTFQSSYPIVEAVAVENNCFIDIGTTKDMLLNWKAKSSEIIDLQGLTVTPGLTDSHLHLSMVASKFVDLD
VTGVTSKQDMLEYIRRHSHTLKPGEWLLGSGWDENLFTDGGIPTLDELDQVAPLNPLYITRICEHAAVVNSKSLETINYS
KDISVPEGGKIVVDSTSLKPTGLILESASILFQEHIPEKSYETWKNALRKTIKATIQHGITSVHSNDPLYLGGLKQTYQL
FDELLNKEQLGLRTNLLINHEFLEDLEAMNMYTGYGNDTLQIGAIKIFADGAFGRRTALLREPYHDSPSQYGEAMFSQET
LYDIVRRARERGMPVAVHTIGDQALINVLDILDQFPPSEFRDRLIHVQVVNDNLVKRLASNHRIADIQPRFLASDYPWVK
DRLGEERMPMAYAWKTLLDNGVICGGGSDAPVEPMNPLLGIHAAVTRRAPGEDHEGWYKEQKLSMYEAFRLFTEQAAYTT
NEEHKKGTIEPGKLADMTVYSNNPFQMNHPDDLFQTSIEMTIIGGEIKYSR

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 59756; Mature: 59756

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLYINGVIHTFQSSYPIVEAVAVENNCFIDIGTTKDMLLNWKAKSSEIIDLQGLTVTP
CEEEEEEHHHHHHCCCCCEEEEEEECCCEEEEECCCHHHEEEECCCCCCEEEECCEEECC
GLTDSHLHLSMVASKFVDLDVTGVTSKQDMLEYIRRHSHTLKPGEWLLGSGWDENLFTDG
CCCCCHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCC
GIPTLDELDQVAPLNPLYITRICEHAAVVNSKSLETINYSKDISVPEGGKIVVDSTSLKP
CCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCEEEEECCCCCC
TGLILESASILFQEHIPEKSYETWKNALRKTIKATIQHGITSVHSNDPLYLGGLKQTYQL
CEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHH
FDELLNKEQLGLRTNLLINHEFLEDLEAMNMYTGYGNDTLQIGAIKIFADGAFGRRTALL
HHHHHCHHHCCCEEEEEECHHHHHHHHHHHHEECCCCCEEEEEEEEEEECCCCCHHHHHH
REPYHDSPSQYGEAMFSQETLYDIVRRARERGMPVAVHTIGDQALINVLDILDQFPPSEF
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCHHH
RDRLIHVQVVNDNLVKRLASNHRIADIQPRFLASDYPWVKDRLGEERMPMAYAWKTLLDN
HCCEEEEEEECHHHHHHHHCCCCEEECCCHHHCCCCCHHHHHCCCCCCCHHHHHHHHHCC
GVICGGGSDAPVEPMNPLLGIHAAVTRRAPGEDHEGWYKEQKLSMYEAFRLFTEQAAYTT
CEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
NEEHKKGTIEPGKLADMTVYSNNPFQMNHPDDLFQTSIEMTIIGGEIKYSR
CCHHCCCCCCCCCCEEEEEECCCCEECCCCHHHHHCCEEEEEECCEEEECC
>Mature Secondary Structure
MIKLYINGVIHTFQSSYPIVEAVAVENNCFIDIGTTKDMLLNWKAKSSEIIDLQGLTVTP
CEEEEEEHHHHHHCCCCCEEEEEEECCCEEEEECCCHHHEEEECCCCCCEEEECCEEECC
GLTDSHLHLSMVASKFVDLDVTGVTSKQDMLEYIRRHSHTLKPGEWLLGSGWDENLFTDG
CCCCCHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCC
GIPTLDELDQVAPLNPLYITRICEHAAVVNSKSLETINYSKDISVPEGGKIVVDSTSLKP
CCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCEEEEECCCCCC
TGLILESASILFQEHIPEKSYETWKNALRKTIKATIQHGITSVHSNDPLYLGGLKQTYQL
CEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHH
FDELLNKEQLGLRTNLLINHEFLEDLEAMNMYTGYGNDTLQIGAIKIFADGAFGRRTALL
HHHHHCHHHCCCEEEEEECHHHHHHHHHHHHEECCCCCEEEEEEEEEEECCCCCHHHHHH
REPYHDSPSQYGEAMFSQETLYDIVRRARERGMPVAVHTIGDQALINVLDILDQFPPSEF
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCHHH
RDRLIHVQVVNDNLVKRLASNHRIADIQPRFLASDYPWVKDRLGEERMPMAYAWKTLLDN
HCCEEEEEEECHHHHHHHHCCCCEEECCCHHHCCCCCHHHHHCCCCCCCHHHHHHHHHCC
GVICGGGSDAPVEPMNPLLGIHAAVTRRAPGEDHEGWYKEQKLSMYEAFRLFTEQAAYTT
CEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
NEEHKKGTIEPGKLADMTVYSNNPFQMNHPDDLFQTSIEMTIIGGEIKYSR
CCHHCCCCCCCCCCEEEEEECCCCEECCCCHHHHHCCEEEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]