Click here to switch to the map view.

The map label for this gene is ydhK [H]

Identifier: 23098595

GI number: 23098595

Start: 1191122

End: 1191733

Strand: Reverse

Name: ydhK [H]

Synonym: OB1140

Alternate gene names: 23098595

Gene position: 1191733-1191122 (Counterclockwise)

Preceding gene: 23098603

Following gene: 23098592

Centisome position: 32.83

GC content: 39.71

Gene sequence:

>612_bases
ATGACAAAAAGATTTGGATACTTCGTTGGGGTATTTGTGTTACTGATGGGATTATATGCATGCACTAACGAAAACAATAT
GGATGAAAACGAAGAAAGAAACATGCTTCCGGATAATGAACAAGTGCCTGAAGGAGACCTCGAAGAAGAAAATAAAAGTG
AACATGAACATTCGGATCATGATGAGAGCGGTGAAATCCCTGAAGGTTTAATAGAAGCAGAGGATCCAACCTATGCTGCG
GGAGATGAAATAACAATCACCGCATCACATATGCCCGGTATGGAAGGAGCTTCCGGAACAATTGTTGGTGCTTACGATAC
TACTGCTTACATGGTTAGTTATCAACCAACAGATGGCGGTGAAATGGTTGAAGATCACAAATGGATAATCCAAGAAGAAA
TTGACAATGCAAATAAAAATCCTTATCAATCTGGAGATGAAGTAACTATTAATGCTGCTCATATGGAAGGTATGGATGGT
GCAACAGCAACCATTGAAGACGGCACCGAAACAACCGTATATATGATTGACTATGTAACCGAATCGGGTGAAGAAGTTAA
AAACCATAAATGGGTTACCGAAGAAGAACTTGAGCCTAATGATAGTGAGTAG

Upstream 100 bases:

>100_bases
TATTCGCTTAGTTATTATCTATTATTTTCCATCCTTTGCGTTTATCATGCATCAATTGCGTGAATAATACTTGTACAACT
GGTGAAAGGAGCTTATAACT

Downstream 100 bases:

>100_bases
TAACCAATCATAAATTTGTCTAAAGGTTAATACTCTCTAGAAATGCGTCCTTTGATGTATATCAAGGCGAATTTCACTAT
AGCGAAACTGAGGGCAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MTKRFGYFVGVFVLLMGLYACTNENNMDENEERNMLPDNEQVPEGDLEEENKSEHEHSDHDESGEIPEGLIEAEDPTYAA
GDEITITASHMPGMEGASGTIVGAYDTTAYMVSYQPTDGGEMVEDHKWIIQEEIDNANKNPYQSGDEVTINAAHMEGMDG
ATATIEDGTETTVYMIDYVTESGEEVKNHKWVTEEELEPNDSE

Sequences:

>Translated_203_residues
MTKRFGYFVGVFVLLMGLYACTNENNMDENEERNMLPDNEQVPEGDLEEENKSEHEHSDHDESGEIPEGLIEAEDPTYAA
GDEITITASHMPGMEGASGTIVGAYDTTAYMVSYQPTDGGEMVEDHKWIIQEEIDNANKNPYQSGDEVTINAAHMEGMDG
ATATIEDGTETTVYMIDYVTESGEEVKNHKWVTEEELEPNDSE
>Mature_202_residues
TKRFGYFVGVFVLLMGLYACTNENNMDENEERNMLPDNEQVPEGDLEEENKSEHEHSDHDESGEIPEGLIEAEDPTYAAG
DEITITASHMPGMEGASGTIVGAYDTTAYMVSYQPTDGGEMVEDHKWIIQEEIDNANKNPYQSGDEVTINAAHMEGMDGA
TATIEDGTETTVYMIDYVTESGEEVKNHKWVTEEELEPNDSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011438 [H]

Pfam domain/function: PF07563 DUF1541 [H]

EC number: NA

Molecular weight: Translated: 22572; Mature: 22441

Theoretical pI: Translated: 3.68; Mature: 3.68

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRFGYFVGVFVLLMGLYACTNENNMDENEERNMLPDNEQVPEGDLEEENKSEHEHSDH
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DESGEIPEGLIEAEDPTYAAGDEITITASHMPGMEGASGTIVGAYDTTAYMVSYQPTDGG
CCCCCCCCCCEECCCCCEECCCEEEEEECCCCCCCCCCCCEEEECCCEEEEEEECCCCCC
EMVEDHKWIIQEEIDNANKNPYQSGDEVTINAAHMEGMDGATATIEDGTETTVYMIDYVT
CHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHCCCCCCCEEEECCCCCEEEEEEEEEC
ESGEEVKNHKWVTEEELEPNDSE
CCCHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TKRFGYFVGVFVLLMGLYACTNENNMDENEERNMLPDNEQVPEGDLEEENKSEHEHSDH
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DESGEIPEGLIEAEDPTYAAGDEITITASHMPGMEGASGTIVGAYDTTAYMVSYQPTDGG
CCCCCCCCCCEECCCCCEECCCEEEEEECCCCCCCCCCCCEEEECCCEEEEEEECCCCCC
EMVEDHKWIIQEEIDNANKNPYQSGDEVTINAAHMEGMDGATATIEDGTETTVYMIDYVT
CHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHCCCCCCCEEEECCCCCEEEEEEEEEC
ESGEEVKNHKWVTEEELEPNDSE
CCCHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]