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The map label for this gene is yvaQ [H]

Identifier: 23098580

GI number: 23098580

Start: 1175693

End: 1177159

Strand: Direct

Name: yvaQ [H]

Synonym: OB1125

Alternate gene names: 23098580

Gene position: 1175693-1177159 (Clockwise)

Preceding gene: 23098579

Following gene: 23098581

Centisome position: 32.38

GC content: 34.01

Gene sequence:

>1467_bases
ATGAATAATAAGAATTCTTTAGTGAAGAAAAAGTACATGATTATTTTTTACATACTATTATTTTCAATCCTGTTAGGAGT
TGGAGCCGAACTCATTGTCGGAGCACCGATCGCTAATATTTTAGCAATTTTTATAGGGGGATTAGTTGCTCTTGTCACTA
TTTGGCTGATAAATAGAAGTGAACGATATGCACACTTTATACCTTATATCGTCATTATTGCTATATCAGGGGTAGCGCTA
ATTGTTATGATGAGTTCAGAATATGTAACAAATATGTTATTTATGTTTTATCTATTGGCTGTTTCTGCTTTATCACTCTC
TATCCCAGCTTTAATTACTGGTGGTGTAGTTGGATTACTATTACTTAGCTATTTTGTGTTGGAAAAGGGTGAAGCTATAG
GATTTGATTCACGATCTATGGCAATAACAATTGTTTTCTATGCTTTAGTATTTATTGTTTTATTTATACAAGTAAAAATA
GCACAAATGCTGCTGATAAATGCAGAAAAATCGCTAGAAGAAAGCAATAAGCTCTCGCACGATCAAATGGAACAATCTAA
GTTAGTGAAAAACGGTGTTAGTCAAGTACATCAGGAAATGCAAGTAATTGAAAAGGAAAGTCATTGGAACTTCCAATCCA
TGAAGGAAATGCGAGACGCGTTTAAAGAAATGAATGAAGCAACACAAGTTCAGTCACAAGCTGCTACAACGATTTCTGAA
ACAACAGAACTGACAAATCAGCAAATTAAACTCATGATTGACCTATTTACGAAACTTAAGAATGATGGCCAAAACTTGGA
AGCGTTGTCAAAATCCGGATCCGAATCTATCAGTGAATTAAATAAAATGATGAAAGGATTTCAACATTCTTTTAACAATT
TATCAATAAATATGAAACAATTAGAGCGTACTATTAAAGAGAGTACTGAATTTATTACAGAAATCCAAAGTATTGCTTCA
CAAACAAATTTACTAGCATTAAATGCAAGTATTGAAGCAGCACGAGCTGGTGAATCAGGTAAAGGATTTGCAGTTGTGGC
TGAAGAAATACGTAAACTTGCAGAGACATCAAAATCTACAGCGGAAAAAATTGAAGTTAATATGGAAGGAGTACAACAAG
ATGCTATTCACACACAACAAGAAGTGAAGCAAAATGGAGAACAGTTGGAACAAAGTATCGAACGAGTGAACAAAGCAAGT
GACAACTTTGCAATAATATCCAAAGAAATTTTACAGTTTTTAGATTACACAACTGAATTACGTCATCGAGGTCATAATAT
CCAAACGTCTTCCATAGAGATAGATCAATCACTAGACCAACTAGTTTCTATTATAGAAGAAAACACTGCTACTATGGAAC
AGATGGAAGCAACAGTCGAACAACAAGCAATACGGATGGGAGTTTTAACAGAAGCAATTGAGGCGACAAATCAAGCTGCT
GCGTCTTTAGAAAAGAAAAAAGTCTAA

Upstream 100 bases:

>100_bases
TAGTACAAAAGTTACTGTTTATTCCATACTGGATCGATTGGGGAGTGGATTATTTCTGGTTTTAGATTGTTCATTCAAAA
AAAGAAATTGGAGGGAAAAA

Downstream 100 bases:

>100_bases
TATTGGGGGGAGAATGAATGGATGTAAAGAGTAGGAAAAAGATTCAACGAAGCTGGATGATGTATGATTTTGGAAATTCA
GCATTTGCCACAACCATTAT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MNNKNSLVKKKYMIIFYILLFSILLGVGAELIVGAPIANILAIFIGGLVALVTIWLINRSERYAHFIPYIVIIAISGVAL
IVMMSSEYVTNMLFMFYLLAVSALSLSIPALITGGVVGLLLLSYFVLEKGEAIGFDSRSMAITIVFYALVFIVLFIQVKI
AQMLLINAEKSLEESNKLSHDQMEQSKLVKNGVSQVHQEMQVIEKESHWNFQSMKEMRDAFKEMNEATQVQSQAATTISE
TTELTNQQIKLMIDLFTKLKNDGQNLEALSKSGSESISELNKMMKGFQHSFNNLSINMKQLERTIKESTEFITEIQSIAS
QTNLLALNASIEAARAGESGKGFAVVAEEIRKLAETSKSTAEKIEVNMEGVQQDAIHTQQEVKQNGEQLEQSIERVNKAS
DNFAIISKEILQFLDYTTELRHRGHNIQTSSIEIDQSLDQLVSIIEENTATMEQMEATVEQQAIRMGVLTEAIEATNQAA
ASLEKKKV

Sequences:

>Translated_488_residues
MNNKNSLVKKKYMIIFYILLFSILLGVGAELIVGAPIANILAIFIGGLVALVTIWLINRSERYAHFIPYIVIIAISGVAL
IVMMSSEYVTNMLFMFYLLAVSALSLSIPALITGGVVGLLLLSYFVLEKGEAIGFDSRSMAITIVFYALVFIVLFIQVKI
AQMLLINAEKSLEESNKLSHDQMEQSKLVKNGVSQVHQEMQVIEKESHWNFQSMKEMRDAFKEMNEATQVQSQAATTISE
TTELTNQQIKLMIDLFTKLKNDGQNLEALSKSGSESISELNKMMKGFQHSFNNLSINMKQLERTIKESTEFITEIQSIAS
QTNLLALNASIEAARAGESGKGFAVVAEEIRKLAETSKSTAEKIEVNMEGVQQDAIHTQQEVKQNGEQLEQSIERVNKAS
DNFAIISKEILQFLDYTTELRHRGHNIQTSSIEIDQSLDQLVSIIEENTATMEQMEATVEQQAIRMGVLTEAIEATNQAA
ASLEKKKV
>Mature_488_residues
MNNKNSLVKKKYMIIFYILLFSILLGVGAELIVGAPIANILAIFIGGLVALVTIWLINRSERYAHFIPYIVIIAISGVAL
IVMMSSEYVTNMLFMFYLLAVSALSLSIPALITGGVVGLLLLSYFVLEKGEAIGFDSRSMAITIVFYALVFIVLFIQVKI
AQMLLINAEKSLEESNKLSHDQMEQSKLVKNGVSQVHQEMQVIEKESHWNFQSMKEMRDAFKEMNEATQVQSQAATTISE
TTELTNQQIKLMIDLFTKLKNDGQNLEALSKSGSESISELNKMMKGFQHSFNNLSINMKQLERTIKESTEFITEIQSIAS
QTNLLALNASIEAARAGESGKGFAVVAEEIRKLAETSKSTAEKIEVNMEGVQQDAIHTQQEVKQNGEQLEQSIERVNKAS
DNFAIISKEILQFLDYTTELRHRGHNIQTSSIEIDQSLDQLVSIIEENTATMEQMEATVEQQAIRMGVLTEAIEATNQAA
ASLEKKKV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=236, Percent_Identity=29.2372881355932, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1789453, Length=251, Percent_Identity=30.2788844621514, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1788194, Length=180, Percent_Identity=30.5555555555556, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1788195, Length=101, Percent_Identity=39.6039603960396, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI2367378, Length=74, Percent_Identity=47.2972972972973, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 54382; Mature: 54382

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKNSLVKKKYMIIFYILLFSILLGVGAELIVGAPIANILAIFIGGLVALVTIWLINRS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
ERYAHFIPYIVIIAISGVALIVMMSSEYVTNMLFMFYLLAVSALSLSIPALITGGVVGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLSYFVLEKGEAIGFDSRSMAITIVFYALVFIVLFIQVKIAQMLLINAEKSLEESNKLSH
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
DQMEQSKLVKNGVSQVHQEMQVIEKESHWNFQSMKEMRDAFKEMNEATQVQSQAATTISE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTELTNQQIKLMIDLFTKLKNDGQNLEALSKSGSESISELNKMMKGFQHSFNNLSINMKQ
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEHHH
LERTIKESTEFITEIQSIASQTNLLALNASIEAARAGESGKGFAVVAEEIRKLAETSKST
HHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
AEKIEVNMEGVQQDAIHTQQEVKQNGEQLEQSIERVNKASDNFAIISKEILQFLDYTTEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
RHRGHNIQTSSIEIDQSLDQLVSIIEENTATMEQMEATVEQQAIRMGVLTEAIEATNQAA
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLEKKKV
HHHHHCCC
>Mature Secondary Structure
MNNKNSLVKKKYMIIFYILLFSILLGVGAELIVGAPIANILAIFIGGLVALVTIWLINRS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
ERYAHFIPYIVIIAISGVALIVMMSSEYVTNMLFMFYLLAVSALSLSIPALITGGVVGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLSYFVLEKGEAIGFDSRSMAITIVFYALVFIVLFIQVKIAQMLLINAEKSLEESNKLSH
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
DQMEQSKLVKNGVSQVHQEMQVIEKESHWNFQSMKEMRDAFKEMNEATQVQSQAATTISE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTELTNQQIKLMIDLFTKLKNDGQNLEALSKSGSESISELNKMMKGFQHSFNNLSINMKQ
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEHHH
LERTIKESTEFITEIQSIASQTNLLALNASIEAARAGESGKGFAVVAEEIRKLAETSKST
HHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
AEKIEVNMEGVQQDAIHTQQEVKQNGEQLEQSIERVNKASDNFAIISKEILQFLDYTTEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
RHRGHNIQTSSIEIDQSLDQLVSIIEENTATMEQMEATVEQQAIRMGVLTEAIEATNQAA
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLEKKKV
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]