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The map label for this gene is yeaB [H]

Identifier: 23098578

GI number: 23098578

Start: 1173895

End: 1174767

Strand: Reverse

Name: yeaB [H]

Synonym: OB1123

Alternate gene names: 23098578

Gene position: 1174767-1173895 (Counterclockwise)

Preceding gene: 23098582

Following gene: 23098573

Centisome position: 32.36

GC content: 36.77

Gene sequence:

>873_bases
ATGGATCGTTCAGATCATTTAAAACAAGGTGAAAAAGGTGCATGGCTAAGCATCATTGCTTACCTGATACTCGCTTCATC
AAAACTATATATTGCTTCCATCGGTAGTTCAGATGGATTACGAGCAGATGGGTTAAATAATCTAACAGATATTGTCACTT
CTGTTGCTGTGCTGATCGGCCTTAAAATTGCTCGGAAACCGCCCGATGATATTCATCGTTATGGTCACTATCGTGCAGAA
ACCATTGCATCTTTATTTGCAGCATTCATTATGATGTTTATCGGTCTCCAAGTCATCTTCGAAGCTGGACAAAAACTAAT
CAATTCATCTTACACGCAGCCTGATATGTTAACAGCTTGGACCGCCATTTTTGCAGCAGGTATTATGTTATGTGTGTATC
GATTTAACTTACGGTTATCGAGGAAAATTGAGAGCGGATCTTTATATGCAGCTGCTATGGATAACAAAGCAGATGCTTTA
GTTAGTATCGGGGTTTTTATCGGTATTATCGGGGCTCAATTCGGTTTATTTTGGTTAGATCCATTAACTGCTGGAGTTGT
GGGTATTATTATTTGTAAGACTGCTTGGGATATTTTTAAAGATTCTACGATTACATTAACTGATGGATTCGACGATGAAA
AATTAACAGAAATAAAAGAAACAATAGATAAAGATCCTTCTGTTTTACGTGTCGATGATATTAAAGGAAGAATCCATGGA
AATCAAGAGTTACTCGACATAACCATCCATGTAGACCCTAATTTAACAGTTGCTCAAGGTCATGAAATTACCGATCGAAT
TGAAGAATATTTATATGATAAGCATCGAATTTCTCACGCGCTTATTCATATTGAACCATTCGAAGAACAATAA

Upstream 100 bases:

>100_bases
GCTATATGCTTGTTTGTTTCTCTAGACCCACCAGCAGAAGGTTTGGTAGACTATATAAGCTATAAATAAGTATTTTTATT
ACATGCTGGAGGATAAGAGA

Downstream 100 bases:

>100_bases
ATTAAATCATTAGGTCCCCCTATAAGAGTTTTCAACTTAAACCTTAGGGGGATTTTATATATGATGTATCTCAAACAAGG
CTAATATCGCTTAGATAAAA

Product: cation efflux system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MDRSDHLKQGEKGAWLSIIAYLILASSKLYIASIGSSDGLRADGLNNLTDIVTSVAVLIGLKIARKPPDDIHRYGHYRAE
TIASLFAAFIMMFIGLQVIFEAGQKLINSSYTQPDMLTAWTAIFAAGIMLCVYRFNLRLSRKIESGSLYAAAMDNKADAL
VSIGVFIGIIGAQFGLFWLDPLTAGVVGIIICKTAWDIFKDSTITLTDGFDDEKLTEIKETIDKDPSVLRVDDIKGRIHG
NQELLDITIHVDPNLTVAQGHEITDRIEEYLYDKHRISHALIHIEPFEEQ

Sequences:

>Translated_290_residues
MDRSDHLKQGEKGAWLSIIAYLILASSKLYIASIGSSDGLRADGLNNLTDIVTSVAVLIGLKIARKPPDDIHRYGHYRAE
TIASLFAAFIMMFIGLQVIFEAGQKLINSSYTQPDMLTAWTAIFAAGIMLCVYRFNLRLSRKIESGSLYAAAMDNKADAL
VSIGVFIGIIGAQFGLFWLDPLTAGVVGIIICKTAWDIFKDSTITLTDGFDDEKLTEIKETIDKDPSVLRVDDIKGRIHG
NQELLDITIHVDPNLTVAQGHEITDRIEEYLYDKHRISHALIHIEPFEEQ
>Mature_290_residues
MDRSDHLKQGEKGAWLSIIAYLILASSKLYIASIGSSDGLRADGLNNLTDIVTSVAVLIGLKIARKPPDDIHRYGHYRAE
TIASLFAAFIMMFIGLQVIFEAGQKLINSSYTQPDMLTAWTAIFAAGIMLCVYRFNLRLSRKIESGSLYAAAMDNKADAL
VSIGVFIGIIGAQFGLFWLDPLTAGVVGIIICKTAWDIFKDSTITLTDGFDDEKLTEIKETIDKDPSVLRVDDIKGRIHG
NQELLDITIHVDPNLTVAQGHEITDRIEEYLYDKHRISHALIHIEPFEEQ

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=243, Percent_Identity=22.6337448559671, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786966, Length=258, Percent_Identity=26.3565891472868, Blast_Score=69, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI193210990, Length=307, Percent_Identity=20.5211726384365, Blast_Score=68, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 32197; Mature: 32197

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRSDHLKQGEKGAWLSIIAYLILASSKLYIASIGSSDGLRADGLNNLTDIVTSVAVLIG
CCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
LKIARKPPDDIHRYGHYRAETIASLFAAFIMMFIGLQVIFEAGQKLINSSYTQPDMLTAW
HHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
TAIFAAGIMLCVYRFNLRLSRKIESGSLYAAAMDNKADALVSIGVFIGIIGAQFGLFWLD
HHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
PLTAGVVGIIICKTAWDIFKDSTITLTDGFDDEKLTEIKETIDKDPSVLRVDDIKGRIHG
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
NQELLDITIHVDPNLTVAQGHEITDRIEEYLYDKHRISHALIHIEPFEEQ
CCEEEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHEEEEEEECCCCC
>Mature Secondary Structure
MDRSDHLKQGEKGAWLSIIAYLILASSKLYIASIGSSDGLRADGLNNLTDIVTSVAVLIG
CCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
LKIARKPPDDIHRYGHYRAETIASLFAAFIMMFIGLQVIFEAGQKLINSSYTQPDMLTAW
HHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
TAIFAAGIMLCVYRFNLRLSRKIESGSLYAAAMDNKADALVSIGVFIGIIGAQFGLFWLD
HHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
PLTAGVVGIIICKTAWDIFKDSTITLTDGFDDEKLTEIKETIDKDPSVLRVDDIKGRIHG
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
NQELLDITIHVDPNLTVAQGHEITDRIEEYLYDKHRISHALIHIEPFEEQ
CCEEEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969499; 9384377; 8951816 [H]