Click here to switch to the map view.

The map label for this gene is ygaZ [C]

Identifier: 23098574

GI number: 23098574

Start: 1172050

End: 1172775

Strand: Direct

Name: ygaZ [C]

Synonym: OB1119

Alternate gene names: 23098574

Gene position: 1172050-1172775 (Clockwise)

Preceding gene: 23098571

Following gene: 23098575

Centisome position: 32.28

GC content: 35.54

Gene sequence:

>726_bases
ATGCAGATTTCATCAACAACAAAAGAAGAATCGTCTTTAACAATTATGAAAAGGGGGTTTAAAGCCGGTTTTCCAATTAT
GCTTGGGTATTTACCAATTGCTATTACATATGGAGTGCTAGCTAACCAAATAGGTTTGTCTCTATTTGAATTAACTTGGA
TGAGTGCAGCGGTTTTTGCTGGTGCCAGTCAGTTTATGGCAGTAAATATGATTGCAGTAGGAACAGGTATTATCGAAATA
ATTATTGCAACGTTTGTTTTGAATTTCAGACATTTTATTATGAACTTATCAATGATGAACGTATTAAAAGCAATTCCATT
ACATAAAAAATTACCGCTATCCCTTGGCGTAACGGATGAAACATTTGCAGTTTCTTCCATGTATCCGGAAGAAGGTAAAA
AAGCACAAGGCATTTGGTTTTACGGAACTATTATCGGATTTGCGTATATTTCCTGGGTAATAGGTTCATTGTTTGGTGGA
TTATTAGGGGAAATAATTCCTCCTGCTTTAAGTCAAAGCATGGGAATTGCGCTTTATGCAATGTTTATTGGGTTATTGAT
TCCATCTGTAAAAAAGGATTTCAAAGTAGTTTACATTGCGGTAGTAGCAATGTTTATTCATTGGGGATGTCTTCAATTAG
GGATTAGTACCGGATGGGCAATTGTGTATGGAACTATTTTTGGTGGAATGATTGGCATTCCTTTATTGAAGGAGGAAGAT
GTATGA

Upstream 100 bases:

>100_bases
ACAACCACCGAGCTAGTATTGTCAATAACCAATTTCTTCTTTTTAAATATTGGTAATTTAGTTATAATTAAATCAAAATT
TAATTTGGAGAGAAAACATA

Downstream 100 bases:

>100_bases
TTATTGTAATGATAATGGGGATGTTTATTGTTACAATGCTTCCTCGATTAATACCTGTTTTTATAGTTGAGAAAATACAG
TTTCGTCCTTGGGTTAATCG

Product: branched-chain amino acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MQISSTTKEESSLTIMKRGFKAGFPIMLGYLPIAITYGVLANQIGLSLFELTWMSAAVFAGASQFMAVNMIAVGTGIIEI
IIATFVLNFRHFIMNLSMMNVLKAIPLHKKLPLSLGVTDETFAVSSMYPEEGKKAQGIWFYGTIIGFAYISWVIGSLFGG
LLGEIIPPALSQSMGIALYAMFIGLLIPSVKKDFKVVYIAVVAMFIHWGCLQLGISTGWAIVYGTIFGGMIGIPLLKEED
V

Sequences:

>Translated_241_residues
MQISSTTKEESSLTIMKRGFKAGFPIMLGYLPIAITYGVLANQIGLSLFELTWMSAAVFAGASQFMAVNMIAVGTGIIEI
IIATFVLNFRHFIMNLSMMNVLKAIPLHKKLPLSLGVTDETFAVSSMYPEEGKKAQGIWFYGTIIGFAYISWVIGSLFGG
LLGEIIPPALSQSMGIALYAMFIGLLIPSVKKDFKVVYIAVVAMFIHWGCLQLGISTGWAIVYGTIFGGMIGIPLLKEED
V
>Mature_241_residues
MQISSTTKEESSLTIMKRGFKAGFPIMLGYLPIAITYGVLANQIGLSLFELTWMSAAVFAGASQFMAVNMIAVGTGIIEI
IIATFVLNFRHFIMNLSMMNVLKAIPLHKKLPLSLGVTDETFAVSSMYPEEGKKAQGIWFYGTIIGFAYISWVIGSLFGG
LLGEIIPPALSQSMGIALYAMFIGLLIPSVKKDFKVVYIAVVAMFIHWGCLQLGISTGWAIVYGTIFGGMIGIPLLKEED
V

Specific function: Unknown

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlC family [H]

Homologues:

Organism=Escherichia coli, GI1789038, Length=209, Percent_Identity=26.3157894736842, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004471
- InterPro:   IPR011606 [H]

Pfam domain/function: PF03591 AzlC [H]

EC number: NA

Molecular weight: Translated: 26183; Mature: 26183

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQISSTTKEESSLTIMKRGFKAGFPIMLGYLPIAITYGVLANQIGLSLFELTWMSAAVFA
CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GASQFMAVNMIAVGTGIIEIIIATFVLNFRHFIMNLSMMNVLKAIPLHKKLPLSLGVTDE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCC
TFAVSSMYPEEGKKAQGIWFYGTIIGFAYISWVIGSLFGGLLGEIIPPALSQSMGIALYA
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
MFIGLLIPSVKKDFKVVYIAVVAMFIHWGCLQLGISTGWAIVYGTIFGGMIGIPLLKEED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC
V
C
>Mature Secondary Structure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C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]