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The map label for this gene is gerIA [H]

Identifier: 23098551

GI number: 23098551

Start: 1147777

End: 1149279

Strand: Reverse

Name: gerIA [H]

Synonym: OB1096

Alternate gene names: 23098551

Gene position: 1149279-1147777 (Counterclockwise)

Preceding gene: 23098552

Following gene: 23098550

Centisome position: 31.66

GC content: 33.6

Gene sequence:

>1503_bases
ATGAAAAGAAGATTTCGATCCAAAAACAACAATCTTTTTCCACTAACGATAGAAGAATTAAAGAAATTATTAGATAAACA
ATATGCACATTCTTCTGACCTAAGCTTTACTGTTTATGAGCATGAAGAGCAGCAAATTGCCGTTTTTTATATACAATTTT
CAGTAGATGACATAAAACTGCAAAATTTTCTGTTAGAAACACTTCTAGAAACAAAAGAAAAACTTACAAATCGATTAGCA
TTAAAGCGAATACCTCTAAGCGATGGAAGAGAATACGACGATTTTGAAATCATTCTAGATTATTTGATTCAAGGACATGT
ATTTATATATTTTGAATCTGAAAATAATATTCTTGGCTATTCCATCCCAAATAAAATAATTCGAAACCTTGAAACTACTG
AAACAGAATCACTCGTATTAGGTCCAAAGGTCGCATTTACAGAATCTCTTACGACAAATATTAATATTATACGTTACGGT
TTAAAATCAAAAGATTTAGTGATGGAGAAGCATGTCATCGGAAGAAGAGATCCTCGTGAGGTTCGACTTATTTATATCCG
TTCGATTGCCAATGATACAGATATCAACACGTTTAGACAACGAATTAAAGCGTTAGATGTAGATTTCATAGATGATACAT
CTGTACTCACGCAATATTTAGAGGATAATTCTACAACTGTATTTCCACAATTTTTAATTACTGAATTACCAGATCGGTTA
ATCTACAACTTATCTCGTGGAAAAATTGGTGTATTATCCGAAAATAGTCCAAATGCGATTATTGCACCATCTACATTTTT
TAGTTTTTTTGAGTCAACAGAAGATATATATATGCGTTGGAACAGCGCCTCCTTCATACGCATATTAAGATTTATATCAT
TTTTTATATCTACACTGCTTACACCTATATATGTTGCTGCAGTTACATTTCACTATGAAATTGTGCCAACACCAGTGTTA
ATTACCTTAGGAGAATCACGTGCTGCCGTGCCTTTCCCCCCTATATTCGAAGCTTTATTCTTGGAATTAATGATTGAGCT
ATTGAGAGAAGCCGGTGCCCGTCTCCCAACAAAAGTCGGTCAAACTATTGGTATCGTAGGTGGTGTTGTAATTGGAACAG
CAGCGGTTGATGCAGGGATTACAAGTAATGTCTTAGTTATTATTGTTGCATTAAGTGCTCTTGCTTCTTTTACTACACCA
AATTACATTATGGGGACTACTGCACGTCTTATCCGATTTCCGATGATTGTATGTGCGGGGTTACTTGGATTGATTGGAAT
CGTTTTTTGTACAAGTTACCTACTCATTCACTTAATAAAACTTACATCATTAGGAAGACCTTATTTTTCTCCAGTTTATC
CATTTCAATGGAGAGATTTTAATAAATCTTTATTCCGAAGCAAGCCAGATACCCAACAAAAGAGATTTCTTTCTTACCAA
CCTAAAGATAAGTATCGTTTTAGCATTTTAAAAAAAGGATTTAAAAGAGATATTGACGAGTAG

Upstream 100 bases:

>100_bases
TTTACTTTCCAATCATTAAAAAGGATACACACTCTAATGTATAGATAAATCTTTTTTTGTACACTCTAACAGTCATAGTC
TAGGTTGGGGGAGTTATGCA

Downstream 100 bases:

>100_bases
GTGGATATCATGGAAATTAACTTAAAGGTTAAACCAAACTTAAAAATAAAGACATTTTACTTGTTCTATATAATTTCCTT
TATCCAAATTGGTATAGGTT

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MKRRFRSKNNNLFPLTIEELKKLLDKQYAHSSDLSFTVYEHEEQQIAVFYIQFSVDDIKLQNFLLETLLETKEKLTNRLA
LKRIPLSDGREYDDFEIILDYLIQGHVFIYFESENNILGYSIPNKIIRNLETTETESLVLGPKVAFTESLTTNINIIRYG
LKSKDLVMEKHVIGRRDPREVRLIYIRSIANDTDINTFRQRIKALDVDFIDDTSVLTQYLEDNSTTVFPQFLITELPDRL
IYNLSRGKIGVLSENSPNAIIAPSTFFSFFESTEDIYMRWNSASFIRILRFISFFISTLLTPIYVAAVTFHYEIVPTPVL
ITLGESRAAVPFPPIFEALFLELMIELLREAGARLPTKVGQTIGIVGGVVIGTAAVDAGITSNVLVIIVALSALASFTTP
NYIMGTTARLIRFPMIVCAGLLGLIGIVFCTSYLLIHLIKLTSLGRPYFSPVYPFQWRDFNKSLFRSKPDTQQKRFLSYQ
PKDKYRFSILKKGFKRDIDE

Sequences:

>Translated_500_residues
MKRRFRSKNNNLFPLTIEELKKLLDKQYAHSSDLSFTVYEHEEQQIAVFYIQFSVDDIKLQNFLLETLLETKEKLTNRLA
LKRIPLSDGREYDDFEIILDYLIQGHVFIYFESENNILGYSIPNKIIRNLETTETESLVLGPKVAFTESLTTNINIIRYG
LKSKDLVMEKHVIGRRDPREVRLIYIRSIANDTDINTFRQRIKALDVDFIDDTSVLTQYLEDNSTTVFPQFLITELPDRL
IYNLSRGKIGVLSENSPNAIIAPSTFFSFFESTEDIYMRWNSASFIRILRFISFFISTLLTPIYVAAVTFHYEIVPTPVL
ITLGESRAAVPFPPIFEALFLELMIELLREAGARLPTKVGQTIGIVGGVVIGTAAVDAGITSNVLVIIVALSALASFTTP
NYIMGTTARLIRFPMIVCAGLLGLIGIVFCTSYLLIHLIKLTSLGRPYFSPVYPFQWRDFNKSLFRSKPDTQQKRFLSYQ
PKDKYRFSILKKGFKRDIDE
>Mature_500_residues
MKRRFRSKNNNLFPLTIEELKKLLDKQYAHSSDLSFTVYEHEEQQIAVFYIQFSVDDIKLQNFLLETLLETKEKLTNRLA
LKRIPLSDGREYDDFEIILDYLIQGHVFIYFESENNILGYSIPNKIIRNLETTETESLVLGPKVAFTESLTTNINIIRYG
LKSKDLVMEKHVIGRRDPREVRLIYIRSIANDTDINTFRQRIKALDVDFIDDTSVLTQYLEDNSTTVFPQFLITELPDRL
IYNLSRGKIGVLSENSPNAIIAPSTFFSFFESTEDIYMRWNSASFIRILRFISFFISTLLTPIYVAAVTFHYEIVPTPVL
ITLGESRAAVPFPPIFEALFLELMIELLREAGARLPTKVGQTIGIVGGVVIGTAAVDAGITSNVLVIIVALSALASFTTP
NYIMGTTARLIRFPMIVCAGLLGLIGIVFCTSYLLIHLIKLTSLGRPYFSPVYPFQWRDFNKSLFRSKPDTQQKRFLSYQ
PKDKYRFSILKKGFKRDIDE

Specific function: Required for inosine germination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 57315; Mature: 57315

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRFRSKNNNLFPLTIEELKKLLDKQYAHSSDLSFTVYEHEEQQIAVFYIQFSVDDIKL
CCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEEECCHHHH
QNFLLETLLETKEKLTNRLALKRIPLSDGREYDDFEIILDYLIQGHVFIYFESENNILGY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEE
SIPNKIIRNLETTETESLVLGPKVAFTESLTTNINIIRYGLKSKDLVMEKHVIGRRDPRE
ECHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHCCCCCCCC
VRLIYIRSIANDTDINTFRQRIKALDVDFIDDTSVLTQYLEDNSTTVFPQFLITELPDRL
EEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEHHHHHHHHCCHHH
IYNLSRGKIGVLSENSPNAIIAPSTFFSFFESTEDIYMRWNSASFIRILRFISFFISTLL
HHCCCCCEEEEEECCCCCEEECHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHH
TPIYVAAVTFHYEIVPTPVLITLGESRAAVPFPPIFEALFLELMIELLREAGARLPTKVG
HHHHHHHHHHEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHC
QTIGIVGGVVIGTAAVDAGITSNVLVIIVALSALASFTTPNYIMGTTARLIRFPMIVCAG
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LLGLIGIVFCTSYLLIHLIKLTSLGRPYFSPVYPFQWRDFNKSLFRSKPDTQQKRFLSYQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHCCCC
PKDKYRFSILKKGFKRDIDE
CCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKRRFRSKNNNLFPLTIEELKKLLDKQYAHSSDLSFTVYEHEEQQIAVFYIQFSVDDIKL
CCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEEECCHHHH
QNFLLETLLETKEKLTNRLALKRIPLSDGREYDDFEIILDYLIQGHVFIYFESENNILGY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEE
SIPNKIIRNLETTETESLVLGPKVAFTESLTTNINIIRYGLKSKDLVMEKHVIGRRDPRE
ECHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHCCCCCCCC
VRLIYIRSIANDTDINTFRQRIKALDVDFIDDTSVLTQYLEDNSTTVFPQFLITELPDRL
EEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEHHHHHHHHCCHHH
IYNLSRGKIGVLSENSPNAIIAPSTFFSFFESTEDIYMRWNSASFIRILRFISFFISTLL
HHCCCCCEEEEEECCCCCEEECHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHH
TPIYVAAVTFHYEIVPTPVLITLGESRAAVPFPPIFEALFLELMIELLREAGARLPTKVG
HHHHHHHHHHEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHC
QTIGIVGGVVIGTAAVDAGITSNVLVIIVALSALASFTTPNYIMGTTARLIRFPMIVCAG
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LLGLIGIVFCTSYLLIHLIKLTSLGRPYFSPVYPFQWRDFNKSLFRSKPDTQQKRFLSYQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHCCCC
PKDKYRFSILKKGFKRDIDE
CCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9852021 [H]