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The map label for this gene is ythA [H]

Identifier: 23098505

GI number: 23098505

Start: 1091610

End: 1092950

Strand: Reverse

Name: ythA [H]

Synonym: OB1050

Alternate gene names: 23098505

Gene position: 1092950-1091610 (Counterclockwise)

Preceding gene: 23098506

Following gene: 23098504

Centisome position: 30.1

GC content: 39.82

Gene sequence:

>1341_bases
ATGTTATTCGATGATCCGGTATATGCTAGTCGCTTACTGACTTTACTCACGCTTTCTTTCCATATTATCTATGCCACAAT
TGGTGTCGGTGTCCCACTAATGATTATGATTGCTCAATGGATAGGAATTAAGAAAAATGACATGCATTACTTATTAATGG
CCCGGCGTTGGGCAAAAGGGTTTATAGTAACAGTAGCTGTCGGTGTAGTTACTGGTACTGCTATTGGTTTGCAGCTTTCC
CTACTTTGGCCAAGTTTTATGGAGTTAGCTGGTAATATTATCGCACTTCCTCTGTTTATGGAAGTATTTGCATTCTTTTT
CGAAGCTATTTTTCTTGGTATCTACTTATACACTTGGGACCGCTTCGATAATCAAAAAAAACATTTCTTATTACTCATAC
CAGTTGCTGTAGGTGGCGGTATGTCAGCTTACTTTATTACGGTAGTTAACTCGTTTATGAATTCTCCAGCCGGCTTTGAC
ATTGTAAATGGCGAGCTTGTTAATGCTAATCCACTTGCTGCCATGTTCACGGTATCCATGCCTACAAAAGTAGCGCACGT
GTTATCAACTGGTTATATGACGATTGCTTTTGTTTTAGCGGCAATTGCAGCCTTTCGTCTATTACAAGGGTCAAATCGGG
AATATCATAAGAAATCACTTAACATGCTAATGAAAGTAGGTTTTGTCTTTGCTCTAGCAACTGCGTTAATTGGAGACCTT
TCTGGTAAATATTTAGCAGAATATCAACCAGAAAAATTAGCAGCTGCGGAGTGGCATTTTGAAACATCTTCAGAGGCGCC
ATTAGTAATGTGGGGAGTTCTTGATGACAACAATGAACCGCAATACGCATTGGAAATCCCTTACGCACTAAGTATATTAG
CACATAGTTGGCCAACCGCAGAAGTTATTGGCCTAAATGAATTCCCTGAAGACGAGCAACCTCCACTTATCATTCATTAT
TTCTTTGACACGATGGTGACTATCGGGGTATTTATGCTTGGTCTATCATTTATTTATTGGCTTGGTATCCGTAAACGCTG
GAACTTCGTCGAATCAAAATGGTACCGTTGGCTCATCGTTCTAGGAGGCCCATTATCATTCCTAGCTATCGAAGCTGGCT
GGTGGATGGCTGAAGTTGGTAGACAGCCTTGGATTTTACGAGGGATTATGACGATTGACGAAGCAGCAACAACCAGTGAT
TATGTTGGAATAATGTTCTACTTATTCGTACTACTTTATCTTATCTTAGGAGTAGGAACTGTAGTTGTATTAAGAAAAAT
GTTCCAAAGAAGTCCGATAGAAAAAGACATCGAGAATTATCAAGGTGGTGACCAAAAATGA

Upstream 100 bases:

>100_bases
ATAGAAGATAAAAATTACTATTTTTCGATTGTTTCCGATTAATTTTAACCATCACCGGGTAAATTAATACAATATGGTTG
TCTTATAAGGAGGTCAACAA

Downstream 100 bases:

>100_bases
TATTAGAAATCATCGGTATTTCTGTGCTTTGGTTATTCCTGTTTGGCTATGTCATCGTTGGTTCCATTGATTACGGTGCA
GGATTCTTTAATGCATACAG

Product: cytochrome d ubiquinol oxidase subunit I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MLFDDPVYASRLLTLLTLSFHIIYATIGVGVPLMIMIAQWIGIKKNDMHYLLMARRWAKGFIVTVAVGVVTGTAIGLQLS
LLWPSFMELAGNIIALPLFMEVFAFFFEAIFLGIYLYTWDRFDNQKKHFLLLIPVAVGGGMSAYFITVVNSFMNSPAGFD
IVNGELVNANPLAAMFTVSMPTKVAHVLSTGYMTIAFVLAAIAAFRLLQGSNREYHKKSLNMLMKVGFVFALATALIGDL
SGKYLAEYQPEKLAAAEWHFETSSEAPLVMWGVLDDNNEPQYALEIPYALSILAHSWPTAEVIGLNEFPEDEQPPLIIHY
FFDTMVTIGVFMLGLSFIYWLGIRKRWNFVESKWYRWLIVLGGPLSFLAIEAGWWMAEVGRQPWILRGIMTIDEAATTSD
YVGIMFYLFVLLYLILGVGTVVVLRKMFQRSPIEKDIENYQGGDQK

Sequences:

>Translated_446_residues
MLFDDPVYASRLLTLLTLSFHIIYATIGVGVPLMIMIAQWIGIKKNDMHYLLMARRWAKGFIVTVAVGVVTGTAIGLQLS
LLWPSFMELAGNIIALPLFMEVFAFFFEAIFLGIYLYTWDRFDNQKKHFLLLIPVAVGGGMSAYFITVVNSFMNSPAGFD
IVNGELVNANPLAAMFTVSMPTKVAHVLSTGYMTIAFVLAAIAAFRLLQGSNREYHKKSLNMLMKVGFVFALATALIGDL
SGKYLAEYQPEKLAAAEWHFETSSEAPLVMWGVLDDNNEPQYALEIPYALSILAHSWPTAEVIGLNEFPEDEQPPLIIHY
FFDTMVTIGVFMLGLSFIYWLGIRKRWNFVESKWYRWLIVLGGPLSFLAIEAGWWMAEVGRQPWILRGIMTIDEAATTSD
YVGIMFYLFVLLYLILGVGTVVVLRKMFQRSPIEKDIENYQGGDQK
>Mature_446_residues
MLFDDPVYASRLLTLLTLSFHIIYATIGVGVPLMIMIAQWIGIKKNDMHYLLMARRWAKGFIVTVAVGVVTGTAIGLQLS
LLWPSFMELAGNIIALPLFMEVFAFFFEAIFLGIYLYTWDRFDNQKKHFLLLIPVAVGGGMSAYFITVVNSFMNSPAGFD
IVNGELVNANPLAAMFTVSMPTKVAHVLSTGYMTIAFVLAAIAAFRLLQGSNREYHKKSLNMLMKVGFVFALATALIGDL
SGKYLAEYQPEKLAAAEWHFETSSEAPLVMWGVLDDNNEPQYALEIPYALSILAHSWPTAEVIGLNEFPEDEQPPLIIHY
FFDTMVTIGVFMLGLSFIYWLGIRKRWNFVESKWYRWLIVLGGPLSFLAIEAGWWMAEVGRQPWILRGIMTIDEAATTSD
YVGIMFYLFVLLYLILGVGTVVVLRKMFQRSPIEKDIENYQGGDQK

Specific function: Probable cytochrome [H]

COG id: COG1271

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome ubiquinol oxidase subunit 1 family [H]

Homologues:

Organism=Escherichia coli, GI87081779, Length=315, Percent_Identity=30.4761904761905, Blast_Score=141, Evalue=9e-35,
Organism=Escherichia coli, GI1787212, Length=318, Percent_Identity=31.1320754716981, Blast_Score=125, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002585 [H]

Pfam domain/function: PF01654 Bac_Ubq_Cox [H]

EC number: 1.10.3.-

Molecular weight: Translated: 50257; Mature: 50257

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFDDPVYASRLLTLLTLSFHIIYATIGVGVPLMIMIAQWIGIKKNDMHYLLMARRWAKG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
FIVTVAVGVVTGTAIGLQLSLLWPSFMELAGNIIALPLFMEVFAFFFEAIFLGIYLYTWD
HHHHHHHHHHHHHHHHEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFDNQKKHFLLLIPVAVGGGMSAYFITVVNSFMNSPAGFDIVNGELVNANPLAAMFTVSM
CCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEECCEEECCCCCEEEEEECC
PTKVAHVLSTGYMTIAFVLAAIAAFRLLQGSNREYHKKSLNMLMKVGFVFALATALIGDL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
SGKYLAEYQPEKLAAAEWHFETSSEAPLVMWGVLDDNNEPQYALEIPYALSILAHSWPTA
CCCHHHCCCCCHHHHHHCCCCCCCCCCEEEEEEECCCCCCCEEEECCHHHHHHHCCCCCE
EVIGLNEFPEDEQPPLIIHYFFDTMVTIGVFMLGLSFIYWLGIRKRWNFVESKWYRWLIV
EEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE
LGGPLSFLAIEAGWWMAEVGRQPWILRGIMTIDEAATTSDYVGIMFYLFVLLYLILGVGT
ECCCHHEEEEECCCHHHHHCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VVVLRKMFQRSPIEKDIENYQGGDQK
HHHHHHHHHCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MLFDDPVYASRLLTLLTLSFHIIYATIGVGVPLMIMIAQWIGIKKNDMHYLLMARRWAKG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
FIVTVAVGVVTGTAIGLQLSLLWPSFMELAGNIIALPLFMEVFAFFFEAIFLGIYLYTWD
HHHHHHHHHHHHHHHHEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFDNQKKHFLLLIPVAVGGGMSAYFITVVNSFMNSPAGFDIVNGELVNANPLAAMFTVSM
CCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEECCEEECCCCCEEEEEECC
PTKVAHVLSTGYMTIAFVLAAIAAFRLLQGSNREYHKKSLNMLMKVGFVFALATALIGDL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
SGKYLAEYQPEKLAAAEWHFETSSEAPLVMWGVLDDNNEPQYALEIPYALSILAHSWPTA
CCCHHHCCCCCHHHHHHCCCCCCCCCCEEEEEEECCCCCCCEEEECCHHHHHHHCCCCCE
EVIGLNEFPEDEQPPLIIHYFFDTMVTIGVFMLGLSFIYWLGIRKRWNFVESKWYRWLIV
EEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE
LGGPLSFLAIEAGWWMAEVGRQPWILRGIMTIDEAATTSDYVGIMFYLFVLLYLILGVGT
ECCCHHEEEEECCCHHHHHCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VVVLRKMFQRSPIEKDIENYQGGDQK
HHHHHHHHHCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]