Click here to switch to the map view.

The map label for this gene is ythB [H]

Identifier: 23098504

GI number: 23098504

Start: 1090600

End: 1091613

Strand: Reverse

Name: ythB [H]

Synonym: OB1049

Alternate gene names: 23098504

Gene position: 1091613-1090600 (Counterclockwise)

Preceding gene: 23098505

Following gene: 23098499

Centisome position: 30.07

GC content: 35.8

Gene sequence:

>1014_bases
ATGATATTAGAAATCATCGGTATTTCTGTGCTTTGGTTATTCCTGTTTGGCTATGTCATCGTTGGTTCCATTGATTACGG
TGCAGGATTCTTTAATGCATACAGCATTTTAACCGGGAAGCAACATATTGTTTCTAAAGTTATTCAACGTTATCTTTCAC
CAGTATGGGAAGTCACAAATGTATTTTTTGTATTTTTCTTCGTAGGAATCGTTGGATTCTTTCCAGAAACTGCATTTTAC
TTTGGTACCATACTCTTGGTTCCTGGAAGTTTAGCATTGATTTTACTCGCAATCCGCGGGTCTTATTATGCATTTGAATC
TTATGGAAAGAAAGGGCATAAAGGATATGCATTTATGTATGGAGCGTCTGGAATATTACTCCCAGCCTCCCTCTCTATTG
TATTGACAATATCTGAAGGTGGATTTATCACCCTTAATAATGGAGAGCCACAACTTGAATATCTTGATTTATTTATGAGC
CCACTTACTTGGTCGATTGTGGTATTAAGTATTATCTCTGTTCTCTATATTTCAGCCGTATTTTTGACCTGGTATGCAAA
TGAGACTGGTGATGAAGGAGCAACAAATTTAATGCGCAAATATGCATTAGTTTGGTCCGTTCCACTTATCATTGCAGCTT
CCGGAATTATTGTAGAACTGCGCTTCCATAACGAAGAACACTTTAACAACATTATTGACCTATGGTGGATGTTCGGAATA
TCTTTTCTTCTATGGATTGGTACCGTATGGTTAATTTGGAAGCGTAAGAACTACATCACAGCATTCTGGCTACTAGTTGG
TCAATTTGCTTTTGCCTTTTTCGGATATGGTATTTCTCATTACCCATATCTTTTATATCCATATATTACGATATCTGAAG
GCTTTACAAATGAAGCAATGGCAATAGCTTTAATAATTGCCTTCATACTAGGAATGGCATTATTAATACCATCGCTTTAT
TTACTGCTAAGGTTATTCTTGTTTGATGAAAATTATAAAAAAGGAAAGAAGTGA

Upstream 100 bases:

>100_bases
ATCTTATCTTAGGAGTAGGAACTGTAGTTGTATTAAGAAAAATGTTCCAAAGAAGTCCGATAGAAAAAGACATCGAGAAT
TATCAAGGTGGTGACCAAAA

Downstream 100 bases:

>100_bases
TTAGACATGATTAATGACTTTCTCATTTTTATCGCACCCTTCCTTATTTTGTTTGCCGCAATGGGAATATCATTCTACGT
AGCACTAAAAGATGGATCGT

Product: cytochrome d ubiquinol oxidase subunit II

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MILEIIGISVLWLFLFGYVIVGSIDYGAGFFNAYSILTGKQHIVSKVIQRYLSPVWEVTNVFFVFFFVGIVGFFPETAFY
FGTILLVPGSLALILLAIRGSYYAFESYGKKGHKGYAFMYGASGILLPASLSIVLTISEGGFITLNNGEPQLEYLDLFMS
PLTWSIVVLSIISVLYISAVFLTWYANETGDEGATNLMRKYALVWSVPLIIAASGIIVELRFHNEEHFNNIIDLWWMFGI
SFLLWIGTVWLIWKRKNYITAFWLLVGQFAFAFFGYGISHYPYLLYPYITISEGFTNEAMAIALIIAFILGMALLIPSLY
LLLRLFLFDENYKKGKK

Sequences:

>Translated_337_residues
MILEIIGISVLWLFLFGYVIVGSIDYGAGFFNAYSILTGKQHIVSKVIQRYLSPVWEVTNVFFVFFFVGIVGFFPETAFY
FGTILLVPGSLALILLAIRGSYYAFESYGKKGHKGYAFMYGASGILLPASLSIVLTISEGGFITLNNGEPQLEYLDLFMS
PLTWSIVVLSIISVLYISAVFLTWYANETGDEGATNLMRKYALVWSVPLIIAASGIIVELRFHNEEHFNNIIDLWWMFGI
SFLLWIGTVWLIWKRKNYITAFWLLVGQFAFAFFGYGISHYPYLLYPYITISEGFTNEAMAIALIIAFILGMALLIPSLY
LLLRLFLFDENYKKGKK
>Mature_337_residues
MILEIIGISVLWLFLFGYVIVGSIDYGAGFFNAYSILTGKQHIVSKVIQRYLSPVWEVTNVFFVFFFVGIVGFFPETAFY
FGTILLVPGSLALILLAIRGSYYAFESYGKKGHKGYAFMYGASGILLPASLSIVLTISEGGFITLNNGEPQLEYLDLFMS
PLTWSIVVLSIISVLYISAVFLTWYANETGDEGATNLMRKYALVWSVPLIIAASGIIVELRFHNEEHFNNIIDLWWMFGI
SFLLWIGTVWLIWKRKNYITAFWLLVGQFAFAFFGYGISHYPYLLYPYITISEGFTNEAMAIALIIAFILGMALLIPSLY
LLLRLFLFDENYKKGKK

Specific function: Unknown

COG id: COG1294

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003317 [H]

Pfam domain/function: PF02322 Cyto_ox_2 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 38228; Mature: 38228

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILEIIGISVLWLFLFGYVIVGSIDYGAGFFNAYSILTGKQHIVSKVIQRYLSPVWEVTN
CEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
VFFVFFFVGIVGFFPETAFYFGTILLVPGSLALILLAIRGSYYAFESYGKKGHKGYAFMY
HHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEE
GASGILLPASLSIVLTISEGGFITLNNGEPQLEYLDLFMSPLTWSIVVLSIISVLYISAV
CCCCEEEECCEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLTWYANETGDEGATNLMRKYALVWSVPLIIAASGIIVELRFHNEEHFNNIIDLWWMFGI
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHH
SFLLWIGTVWLIWKRKNYITAFWLLVGQFAFAFFGYGISHYPYLLYPYITISEGFTNEAM
HHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCHHHH
AIALIIAFILGMALLIPSLYLLLRLFLFDENYKKGKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MILEIIGISVLWLFLFGYVIVGSIDYGAGFFNAYSILTGKQHIVSKVIQRYLSPVWEVTN
CEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
VFFVFFFVGIVGFFPETAFYFGTILLVPGSLALILLAIRGSYYAFESYGKKGHKGYAFMY
HHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEE
GASGILLPASLSIVLTISEGGFITLNNGEPQLEYLDLFMSPLTWSIVVLSIISVLYISAV
CCCCEEEECCEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLTWYANETGDEGATNLMRKYALVWSVPLIIAASGIIVELRFHNEEHFNNIIDLWWMFGI
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHH
SFLLWIGTVWLIWKRKNYITAFWLLVGQFAFAFFGYGISHYPYLLYPYITISEGFTNEAM
HHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCHHHH
AIALIIAFILGMALLIPSLYLLLRLFLFDENYKKGKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]