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The map label for this gene is pspA [C]

Identifier: 23098395

GI number: 23098395

Start: 986905

End: 987576

Strand: Direct

Name: pspA [C]

Synonym: OB0940

Alternate gene names: 23098395

Gene position: 986905-987576 (Clockwise)

Preceding gene: 23098394

Following gene: 23098396

Centisome position: 27.18

GC content: 37.65

Gene sequence:

>672_bases
ATGTTTAAGTTTTTTAATCGAGTGAAGACAGTGGTAAGTTCAGAATTGAATTCTGCGCTTGATAAAGCAGAAGATCCGGT
AAAAATGTTGGATCAATTCATGCGTGATATGGCAGAGGATATCCGCGAAGTAGAAACAGCTGTTGCAAAGCAAATTTCCA
ATGAAAAAATGCTAAAACGTAAAGCTGATGATGCGAAAGCAATGATGGAAAAACGTCAGAAACAAGCAGAGCAAGCAATT
GAAGCGGGAAATGATGACCTAGCTCGACGCGCCCTGCAAGATAAGAAAGAGCATGAAGCCACTGCAACTAGCTTGAATGA
GTCTTGGACAACAGCGAAAAATGATGCTGAAGTTCTTAAATCAAAATTAGATGAAATGAAAAAGGAATACCAAGAAATGA
AATTGAAGAAGGATTCCTTAAAAGCACGTGCTGAATCTGCTAAAACAAGAACAAAAATTAATCGTACGATGTCATCTATC
GGAAATGATAGCTCTAAACAAGGTTTTGAGCGAATGGAAGAGAAAGTAATGCGATATGAAGCAGAAGCAGAGACAAGTGA
AGCGATGTCTTATGAAAGCCGATCCTTAGATGATGAGTTTGAGGAATTAAATAAACAGAATGGTGTTGACGATGAGTTAG
CAGCATTAAAGGCTAAAATGAATAAAGAGTAA

Upstream 100 bases:

>100_bases
TGGTTCATTATAAATTAATGAAACCTAAACGAGAGTTATCCCGTATTACATGATGTCAGAAAAAAATACTAATTGATTAT
AATTTGAAGGAGAGAATTAT

Downstream 100 bases:

>100_bases
GTTGTCTAGATAAGGGCAGTGCTTTAATTAGCTGCCCTTTCTTAAAGGTGGAGGGGGATTGATTTGTGTAAAAGATGGAT
GTTATGTATAGGGATGTTAC

Product: phage shock protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MFKFFNRVKTVVSSELNSALDKAEDPVKMLDQFMRDMAEDIREVETAVAKQISNEKMLKRKADDAKAMMEKRQKQAEQAI
EAGNDDLARRALQDKKEHEATATSLNESWTTAKNDAEVLKSKLDEMKKEYQEMKLKKDSLKARAESAKTRTKINRTMSSI
GNDSSKQGFERMEEKVMRYEAEAETSEAMSYESRSLDDEFEELNKQNGVDDELAALKAKMNKE

Sequences:

>Translated_223_residues
MFKFFNRVKTVVSSELNSALDKAEDPVKMLDQFMRDMAEDIREVETAVAKQISNEKMLKRKADDAKAMMEKRQKQAEQAI
EAGNDDLARRALQDKKEHEATATSLNESWTTAKNDAEVLKSKLDEMKKEYQEMKLKKDSLKARAESAKTRTKINRTMSSI
GNDSSKQGFERMEEKVMRYEAEAETSEAMSYESRSLDDEFEELNKQNGVDDELAALKAKMNKE
>Mature_223_residues
MFKFFNRVKTVVSSELNSALDKAEDPVKMLDQFMRDMAEDIREVETAVAKQISNEKMLKRKADDAKAMMEKRQKQAEQAI
EAGNDDLARRALQDKKEHEATATSLNESWTTAKNDAEVLKSKLDEMKKEYQEMKLKKDSLKARAESAKTRTKINRTMSSI
GNDSSKQGFERMEEKVMRYEAEAETSEAMSYESRSLDDEFEELNKQNGVDDELAALKAKMNKE

Specific function: The Phage Shock Protein (Psp) Operon (Pspabce) May Play A Significant Role In The Competition For Survival Under Nutrient- Or Energy-Limited Conditions. Pspa Has A Role As A Negative Regulator, Is Required For Efficient Translocation And Has An Unknown Fu

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

Organism=Escherichia coli, GI2367118, Length=221, Percent_Identity=29.8642533936652, Blast_Score=91, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 25600; Mature: 25600

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKFFNRVKTVVSSELNSALDKAEDPVKMLDQFMRDMAEDIREVETAVAKQISNEKMLKR
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KADDAKAMMEKRQKQAEQAIEAGNDDLARRALQDKKEHEATATSLNESWTTAKNDAEVLK
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
SKLDEMKKEYQEMKLKKDSLKARAESAKTRTKINRTMSSIGNDSSKQGFERMEEKVMRYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AEAETSEAMSYESRSLDDEFEELNKQNGVDDELAALKAKMNKE
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MFKFFNRVKTVVSSELNSALDKAEDPVKMLDQFMRDMAEDIREVETAVAKQISNEKMLKR
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KADDAKAMMEKRQKQAEQAIEAGNDDLARRALQDKKEHEATATSLNESWTTAKNDAEVLK
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
SKLDEMKKEYQEMKLKKDSLKARAESAKTRTKINRTMSSIGNDSSKQGFERMEEKVMRYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AEAETSEAMSYESRSLDDEFEELNKQNGVDDELAALKAKMNKE
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]