Click here to switch to the map view.

The map label for this gene is yvrE [H]

Identifier: 23098389

GI number: 23098389

Start: 982789

End: 983238

Strand: Direct

Name: yvrE [H]

Synonym: OB0934

Alternate gene names: 23098389

Gene position: 982789-983238 (Clockwise)

Preceding gene: 23098388

Following gene: 23098390

Centisome position: 27.07

GC content: 42.0

Gene sequence:

>450_bases
TTGAGGAATATATTTTCTAACCAGGGGGTATGTCCTTTAGGCCCTATTGCTCTAGCTGCATGTTTACAAGTCGATGCAAC
ATGTTACAATGCTGTTACCAAAGAGACAACAGAGCTAAAAGAGGGAAGAGTCGTAATTGATTTAAAGGATATTGAGGGAT
CTCCTGATGGAATGACCATCGATGTCAACGACCGGTTGTGGGTAGCGCTTTGGGGAGGATCTCGAGTCATCTGTGTTGAT
CCACGGCTGGGTAAAATCGTTGAATCAATTACCTTACCTGTTTCAAATGTGACAAGTTGTACATTTGGAGGTCCTAAAAT
GCGAACGCTTTATATTACAACAGCGAGTGAAGGGATAGGGAATGATAAGTTTAAATTAGAACCGTTGGCAGGATCATTAT
TCTCATGTCAGGTGGGAGTACAAGGACTAGCTTCTATTCCGTACGTATAA

Upstream 100 bases:

>100_bases
ACATCCTCAATAGTAGATGTTGCACAGTACTTCTACCGCAATAGACATTTCAGAAATAACATTAATATAGCTTAACTTCA
TTATTTTTTTATCTCCAATC

Downstream 100 bases:

>100_bases
TGATGTAGTCAATAGTGGTCTGAGGTGTACCATCGTTCGTACAATCAGGAGGCAAAGTAGCGACCGGCTTATAGGAAATG
CTGTTTTGCTTCTCCATATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MRNIFSNQGVCPLGPIALAACLQVDATCYNAVTKETTELKEGRVVIDLKDIEGSPDGMTIDVNDRLWVALWGGSRVICVD
PRLGKIVESITLPVSNVTSCTFGGPKMRTLYITTASEGIGNDKFKLEPLAGSLFSCQVGVQGLASIPYV

Sequences:

>Translated_149_residues
MRNIFSNQGVCPLGPIALAACLQVDATCYNAVTKETTELKEGRVVIDLKDIEGSPDGMTIDVNDRLWVALWGGSRVICVD
PRLGKIVESITLPVSNVTSCTFGGPKMRTLYITTASEGIGNDKFKLEPLAGSLFSCQVGVQGLASIPYV
>Mature_149_residues
MRNIFSNQGVCPLGPIALAACLQVDATCYNAVTKETTELKEGRVVIDLKDIEGSPDGMTIDVNDRLWVALWGGSRVICVD
PRLGKIVESITLPVSNVTSCTFGGPKMRTLYITTASEGIGNDKFKLEPLAGSLFSCQVGVQGLASIPYV

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SMP-30/CGR1 family [H]

Homologues:

Organism=Homo sapiens, GI23111021, Length=127, Percent_Identity=38.5826771653543, Blast_Score=89, Evalue=2e-18,
Organism=Homo sapiens, GI4759036, Length=127, Percent_Identity=38.5826771653543, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24646912, Length=129, Percent_Identity=35.6589147286822, Blast_Score=71, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24646910, Length=129, Percent_Identity=35.6589147286822, Blast_Score=71, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24641471, Length=63, Percent_Identity=44.4444444444444, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI18860103, Length=63, Percent_Identity=44.4444444444444, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24641469, Length=63, Percent_Identity=44.4444444444444, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45551448, Length=63, Percent_Identity=44.4444444444444, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR013658
- InterPro:   IPR005511 [H]

Pfam domain/function: PF08450 SGL [H]

EC number: NA

Molecular weight: Translated: 15909; Mature: 15909

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNIFSNQGVCPLGPIALAACLQVDATCYNAVTKETTELKEGRVVIDLKDIEGSPDGMTI
CCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCHHHCCCEEEEEEECCCCCCCCEEE
DVNDRLWVALWGGSRVICVDPRLGKIVESITLPVSNVTSCTFGGPKMRTLYITTASEGIG
EECCCEEEEEECCCEEEEECCCHHHHHHHHCCCCCCCCEEECCCCEEEEEEEEECCCCCC
NDKFKLEPLAGSLFSCQVGVQGLASIPYV
CCCEEEEECCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MRNIFSNQGVCPLGPIALAACLQVDATCYNAVTKETTELKEGRVVIDLKDIEGSPDGMTI
CCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCHHHCCCEEEEEEECCCCCCCCEEE
DVNDRLWVALWGGSRVICVDPRLGKIVESITLPVSNVTSCTFGGPKMRTLYITTASEGIG
EECCCEEEEEECCCEEEEECCCHHHHHHHHCCCCCCCCEEECCCCEEEEEEEEECCCCCC
NDKFKLEPLAGSLFSCQVGVQGLASIPYV
CCCEEEEECCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]