Click here to switch to the map view.

The map label for this gene is ecsC [H]

Identifier: 23098374

GI number: 23098374

Start: 971426

End: 972145

Strand: Reverse

Name: ecsC [H]

Synonym: OB0919

Alternate gene names: 23098374

Gene position: 972145-971426 (Counterclockwise)

Preceding gene: 23098375

Following gene: 23098361

Centisome position: 26.78

GC content: 35.56

Gene sequence:

>720_bases
TTGGTTGCTTATGAGGACATCGTTTCCCAAGAATTAGCACAATGGCGTAAAAAGATGTATGCGAAACCTAGCTTATTTAA
TCAGCTTTCTAAAAAAGCACAAACAAAAATAAACAATTGGATTCCTGAGAAGATACACAGTATCATAACCGATAGTATTA
AAAATATGGTGAAGGCAACTTTGGTTGGTTCTCATATGACTACGCGAAAACCAGAAGTACAGGAATTGAATTTGTATCAG
CAAGATCAACTTGTAAAAGAAAAGTTATCTACTTATAGAAAAACTGCATCTGCGGAAGGCGCAGGGACCGGTGCAGGTGG
AATATTACTGGGATTTGCTGATTTCCCATTGTTACTTTCAATTAAATTAAAGTTTCTATTTGAAGCTGCTACGATATATG
GCTTTAATACGAAGGAATATGAAGAACGATTATTCATTTTACATATCTTTCAATTAGCCTTCTCTAATGAAAAAACACGG
AAACAGACCTTGCGCATTATCGAAAATTGGGAACAGGAAAAGCAGCATTTATTAGATATGGATTGGCGGGCTTTTCAGCA
AGAGTATCGTGATTATATTGATTTAGTTAAATTATTTCAATTAGTCCCAGGTTTTGGAGCAATTGTTGGTGCCTACGCTA
ATTACAATTTACTGGACCAGTTAGGGGAAACAGCGATGAATGCTTACCGCCTCAGGATTTTGAATATACCAAAAAATTAA

Upstream 100 bases:

>100_bases
CTTGATTTATTCAGGGGGATAAACCTCCAGATTAAGTCAAAATTTCCGCATGACTAATAGATCTAACGTTATTTAAAATT
GTAAGTGAGGAGGTCATTTT

Downstream 100 bases:

>100_bases
AGCTCCCAATTCGGGAGCTTTAATATATGGGTCGGCGTCGTGTCCTTTTTCAATTATTAAAATGTGTCTGAATTATTTCT
AAACGTATAATTTTTCACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MVAYEDIVSQELAQWRKKMYAKPSLFNQLSKKAQTKINNWIPEKIHSIITDSIKNMVKATLVGSHMTTRKPEVQELNLYQ
QDQLVKEKLSTYRKTASAEGAGTGAGGILLGFADFPLLLSIKLKFLFEAATIYGFNTKEYEERLFILHIFQLAFSNEKTR
KQTLRIIENWEQEKQHLLDMDWRAFQQEYRDYIDLVKLFQLVPGFGAIVGAYANYNLLDQLGETAMNAYRLRILNIPKN

Sequences:

>Translated_239_residues
MVAYEDIVSQELAQWRKKMYAKPSLFNQLSKKAQTKINNWIPEKIHSIITDSIKNMVKATLVGSHMTTRKPEVQELNLYQ
QDQLVKEKLSTYRKTASAEGAGTGAGGILLGFADFPLLLSIKLKFLFEAATIYGFNTKEYEERLFILHIFQLAFSNEKTR
KQTLRIIENWEQEKQHLLDMDWRAFQQEYRDYIDLVKLFQLVPGFGAIVGAYANYNLLDQLGETAMNAYRLRILNIPKN
>Mature_239_residues
MVAYEDIVSQELAQWRKKMYAKPSLFNQLSKKAQTKINNWIPEKIHSIITDSIKNMVKATLVGSHMTTRKPEVQELNLYQ
QDQLVKEKLSTYRKTASAEGAGTGAGGILLGFADFPLLLSIKLKFLFEAATIYGFNTKEYEERLFILHIFQLAFSNEKTR
KQTLRIIENWEQEKQHLLDMDWRAFQQEYRDYIDLVKLFQLVPGFGAIVGAYANYNLLDQLGETAMNAYRLRILNIPKN

Specific function: Unknown, does not resemble components of ABC transporters [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27691; Mature: 27691

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAYEDIVSQELAQWRKKMYAKPSLFNQLSKKAQTKINNWIPEKIHSIITDSIKNMVKAT
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LVGSHMTTRKPEVQELNLYQQDQLVKEKLSTYRKTASAEGAGTGAGGILLGFADFPLLLS
HHHCHHCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEHHHHHHHHHH
IKLKFLFEAATIYGFNTKEYEERLFILHIFQLAFSNEKTRKQTLRIIENWEQEKQHLLDM
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
DWRAFQQEYRDYIDLVKLFQLVPGFGAIVGAYANYNLLDQLGETAMNAYRLRILNIPKN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEECCCC
>Mature Secondary Structure
MVAYEDIVSQELAQWRKKMYAKPSLFNQLSKKAQTKINNWIPEKIHSIITDSIKNMVKAT
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LVGSHMTTRKPEVQELNLYQQDQLVKEKLSTYRKTASAEGAGTGAGGILLGFADFPLLLS
HHHCHHCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEHHHHHHHHHH
IKLKFLFEAATIYGFNTKEYEERLFILHIFQLAFSNEKTRKQTLRIIENWEQEKQHLLDM
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
DWRAFQQEYRDYIDLVKLFQLVPGFGAIVGAYANYNLLDQLGETAMNAYRLRILNIPKN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8581172; 9579061; 9384377 [H]