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The map label for this gene is 23098354

Identifier: 23098354

GI number: 23098354

Start: 949296

End: 949823

Strand: Direct

Name: 23098354

Synonym: OB0899

Alternate gene names: NA

Gene position: 949296-949823 (Clockwise)

Preceding gene: 23098353

Following gene: 23098355

Centisome position: 26.15

GC content: 33.52

Gene sequence:

>528_bases
ATGGTTTCTCCAAATGCAGGATCTAAAGTTTCTATACAAAGCTACAAACATAATGGACAACTACATCGAACTTGGGAGAA
TAGTGTGATCTTAAAAGGTACGGAGAGTGTGGTTATTGGAGCGAATGATCGTACAAAAGTGATTGAAAGCGATGGTCGTT
CTTGGATTACAAGAGAGCCGGCTATATGTTATTTTCATTCCAAGTATTGGTTTAACATTATCGGAATGCTACGTAATGAT
GGGATTTACTACTACTGTAATATCAGTTCGCCATTTGTTTACGATGGTGAAGCTTTAAAATATATTGATTATGATTTAGA
TGTAAAAGTTTTTCCGGATATGACATTTCAATTATTAGATGAAGATGAATATGAAGAACATCGAAATTTAATGAATTATC
CTCAAGTAATTGATCGTATTTTACATCAACAATTAGAAATTTTAATTCGATGGATCCGACAAGGAAAAGGACCATTTTCC
CCCGACTTTGTCGATAATTGGTATGAAATGTACTTAACGTATCATTGA

Upstream 100 bases:

>100_bases
ATGTCTATTCTTGTTCGTTTAACTTTATATTTCTAGATAGAACACTTATAATAGTAATAATTAAAGAACGATCGGGTGAT
AAGAAAAGGAGAGGAGTACA

Downstream 100 bases:

>100_bases
TTAAAGCTATTTTATTGCAATCACCACATAGAAAGAGGTATCCTTGTTACCGTGAGTTGTAACAAGGTTTTTTAATTGCA
TAGGGAAGTAAAAAAGTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MVSPNAGSKVSIQSYKHNGQLHRTWENSVILKGTESVVIGANDRTKVIESDGRSWITREPAICYFHSKYWFNIIGMLRND
GIYYYCNISSPFVYDGEALKYIDYDLDVKVFPDMTFQLLDEDEYEEHRNLMNYPQVIDRILHQQLEILIRWIRQGKGPFS
PDFVDNWYEMYLTYH

Sequences:

>Translated_175_residues
MVSPNAGSKVSIQSYKHNGQLHRTWENSVILKGTESVVIGANDRTKVIESDGRSWITREPAICYFHSKYWFNIIGMLRND
GIYYYCNISSPFVYDGEALKYIDYDLDVKVFPDMTFQLLDEDEYEEHRNLMNYPQVIDRILHQQLEILIRWIRQGKGPFS
PDFVDNWYEMYLTYH
>Mature_175_residues
MVSPNAGSKVSIQSYKHNGQLHRTWENSVILKGTESVVIGANDRTKVIESDGRSWITREPAICYFHSKYWFNIIGMLRND
GIYYYCNISSPFVYDGEALKYIDYDLDVKVFPDMTFQLLDEDEYEEHRNLMNYPQVIDRILHQQLEILIRWIRQGKGPFS
PDFVDNWYEMYLTYH

Specific function: Unknown

COG id: COG3557

COG function: function code J; Uncharacterized domain/protein associated with RNAses G and E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0374 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y899_OCEIH (Q8CV58)

Other databases:

- EMBL:   BA000028
- RefSeq:   NP_691820.1
- ProteinModelPortal:   Q8CV58
- GeneID:   1016546
- GenomeReviews:   BA000028_GR
- KEGG:   oih:OB0899
- NMPDR:   fig|221109.1.peg.905
- HOGENOM:   HBG288296
- OMA:   RTWVTRE
- ProtClustDB:   PRK13662
- BioCyc:   OIHE221109:OB0899-MONOMER
- HAMAP:   MF_01568
- InterPro:   IPR007295
- InterPro:   IPR016882
- PIRSF:   PIRSF028345

Pfam domain/function: PF04167 DUF402

EC number: NA

Molecular weight: Translated: 20780; Mature: 20780

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSPNAGSKVSIQSYKHNGQLHRTWENSVILKGTESVVIGANDRTKVIESDGRSWITREP
CCCCCCCCEEEEEEECCCCEEEEEECCCEEEECCCEEEEECCCCCEEEECCCCEEEECCC
AICYFHSKYWFNIIGMLRNDGIYYYCNISSPFVYDGEALKYIDYDLDVKVFPDMTFQLLD
EEEEEECHHHHHHHHHEECCCEEEEEECCCCEEECCCEEEEEECCCCEEECCCCEEEECC
EDEYEEHRNLMNYPQVIDRILHQQLEILIRWIRQGKGPFSPDFVDNWYEMYLTYH
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEEEEEC
>Mature Secondary Structure
MVSPNAGSKVSIQSYKHNGQLHRTWENSVILKGTESVVIGANDRTKVIESDGRSWITREP
CCCCCCCCEEEEEEECCCCEEEEEECCCEEEECCCEEEEECCCCCEEEECCCCEEEECCC
AICYFHSKYWFNIIGMLRNDGIYYYCNISSPFVYDGEALKYIDYDLDVKVFPDMTFQLLD
EEEEEECHHHHHHHHHEECCCEEEEEECCCCEEECCCEEEEEECCCCEEECCCCEEEECC
EDEYEEHRNLMNYPQVIDRILHQQLEILIRWIRQGKGPFSPDFVDNWYEMYLTYH
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376