Click here to switch to the map view.

The map label for this gene is yneN [H]

Identifier: 23098307

GI number: 23098307

Start: 903716

End: 904207

Strand: Direct

Name: yneN [H]

Synonym: OB0852

Alternate gene names: 23098307

Gene position: 903716-904207 (Clockwise)

Preceding gene: 23098304

Following gene: 23098308

Centisome position: 24.89

GC content: 36.79

Gene sequence:

>492_bases
ATGAAAATTTTAAAATATGTATTGATCATAAGTATAAGCATGTTTTTACCAATCATGACTGCTTATGCTGAAGGGACTGA
AGTTGGGGAACGTGCACCCGATTTTGAATTGAAAACAATTGATGGTCAACAACTCCGACTTTCAGATTTTAAGGGAGAAC
GCGTGCTAATAAATTTTTGGACGACGTGGTGTCCCCCTTGTAGACAAGAAATGCCTGATATGCAAAGGTTTTATCAAGAT
TTGCAGCCTAATATCTTAGCTGTTAATCTAACCGATACGGAAATGAATAAGGAACAGGTAGTGCGTTTTTCGCAAGAATT
GGAGTTGACATTTCCAATCTTATTAGATGAAAAAGGTGAAGTATCGAAAGCTTACCGTATTAGTCCAATTCCAACCACAT
ATATGATTGATTCGGAAGGTATTATCAGGCATAAATCTTATGGTGCGCTAACTTACGAGCAGATGGTAGCAGAGTATAAT
AAAATGGAATAG

Upstream 100 bases:

>100_bases
TTGTGCACAAAAGTCAGGTTCTTATTAAGACGAAATTTTCTTGTATGCAAATTTAAAGAACAGGAAAACTATGATTAAAG
CTTGTGATGGAGGGGAATAA

Downstream 100 bases:

>100_bases
CAGTGAAAAAAGGAAGAAAAATCAACGGAATAAAACATTTCGGTTGATTTTTCTTTTTTATATTATTTTTTGTTTTAGGG
TGTGAAAATTGACGAATACA

Product: cytochrome c biogenesis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MKILKYVLIISISMFLPIMTAYAEGTEVGERAPDFELKTIDGQQLRLSDFKGERVLINFWTTWCPPCRQEMPDMQRFYQD
LQPNILAVNLTDTEMNKEQVVRFSQELELTFPILLDEKGEVSKAYRISPIPTTYMIDSEGIIRHKSYGALTYEQMVAEYN
KME

Sequences:

>Translated_163_residues
MKILKYVLIISISMFLPIMTAYAEGTEVGERAPDFELKTIDGQQLRLSDFKGERVLINFWTTWCPPCRQEMPDMQRFYQD
LQPNILAVNLTDTEMNKEQVVRFSQELELTFPILLDEKGEVSKAYRISPIPTTYMIDSEGIIRHKSYGALTYEQMVAEYN
KME
>Mature_163_residues
MKILKYVLIISISMFLPIMTAYAEGTEVGERAPDFELKTIDGQQLRLSDFKGERVLINFWTTWCPPCRQEMPDMQRFYQD
LQPNILAVNLTDTEMNKEQVVRFSQELELTFPILLDEKGEVSKAYRISPIPTTYMIDSEGIIRHKSYGALTYEQMVAEYN
KME

Specific function: Involved In Disulfide Bond Formation. Catalyzes A Late, Reductive Step In The Assembly Of Periplasmic C-Type Cytochromes, Probably The Reduction Of Disulfide Bonds Of The Apocytochrome C To Allow Covalent Linkage With The Heme. Possible Subunit Of A Heme

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788523, Length=166, Percent_Identity=27.710843373494, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: NA

Molecular weight: Translated: 19018; Mature: 19018

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILKYVLIISISMFLPIMTAYAEGTEVGERAPDFELKTIDGQQLRLSDFKGERVLINFW
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCEEEEEEE
TTWCPPCRQEMPDMQRFYQDLQPNILAVNLTDTEMNKEQVVRFSQELELTFPILLDEKGE
CCCCCHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCEEEEEEEECCCCC
VSKAYRISPIPTTYMIDSEGIIRHKSYGALTYEQMVAEYNKME
CCCEEECCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKILKYVLIISISMFLPIMTAYAEGTEVGERAPDFELKTIDGQQLRLSDFKGERVLINFW
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCEEEEEEE
TTWCPPCRQEMPDMQRFYQDLQPNILAVNLTDTEMNKEQVVRFSQELELTFPILLDEKGE
CCCCCHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCEEEEEEEECCCCC
VSKAYRISPIPTTYMIDSEGIIRHKSYGALTYEQMVAEYNKME
CCCEEECCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]