Click here to switch to the map view.

The map label for this gene is yfeT [C]

Identifier: 23098267

GI number: 23098267

Start: 865361

End: 866092

Strand: Direct

Name: yfeT [C]

Synonym: OB0812

Alternate gene names: 23098267

Gene position: 865361-866092 (Clockwise)

Preceding gene: 23098265

Following gene: 23098268

Centisome position: 23.84

GC content: 31.69

Gene sequence:

>732_bases
ATGATGTTTTCCAATAAAAAAATTAGTGAGTTTTCCGATTTAGAGTTCGCTTTATATAATTTTATTGTCACACATCCAGA
AAAGGTGATTTATATGCGTATTCGGGATTTGGCAAATGAAACGCATGTTTCACCAACTAGTATTTTAAGGTTTTGTAGAA
AACTAGGATTCGATGGATTTACTGAATTTAAAGTTCAATTAAAAATCTATATAAATCAAACGGAAAAATTAAGTTTTATT
CATTCAACTACCACATTAACCGAATACTTAGAACGTACAATGCAACATGACTATGATCAGCGAATTCGCATGATTTCTCA
ATCTATTGCTGCTGCAGAAACAATTATTTTCATTGGAATAGGAACATCGGGTATTTTAGCGGAATATGGTTCTAGGTATT
TTTCAGCCTTAAAAAAGTTTTCACTGTATATAAAAGACCCCTTTTTTCCCATGTACACTTCTCCACTGAAAAATAGCATT
GCTATAGTATTATCAGTATCTGGGGAAACGGAAACCATCATCAATCTTACTAATCGAGCAAAGGAAGAGGGAACAAAAGT
AATTAGTATAACGAATTATCCCGACTGTACGTTGGCAAAACTATCTGATTACAATCTTTCTTATTTTGTTTCCACAGAGT
ATAGAGAATCATTTAATTTGACTACGCAAATACCTGTCATTCATTTATTAGAAAGCCTAGCTAAAGAAACGTATAAATAT
ATTCATACGTAA

Upstream 100 bases:

>100_bases
TTCCGTTCATAAAATGAAAACATCCCTTCTAATAATTTAAAATTATCAAAATATGATTTATAATAAACTTACATACTAAA
GAGAAATGGCGAGTGAATGA

Downstream 100 bases:

>100_bases
ATCTACAAATAGTTAAGCGCTTATATTTAACTTATATGAGATAACCAACTGTTGTAAATGTATATACGATGTTTTGTTTT
TTGTTCCATCAAGTTGGGAG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MMFSNKKISEFSDLEFALYNFIVTHPEKVIYMRIRDLANETHVSPTSILRFCRKLGFDGFTEFKVQLKIYINQTEKLSFI
HSTTTLTEYLERTMQHDYDQRIRMISQSIAAAETIIFIGIGTSGILAEYGSRYFSALKKFSLYIKDPFFPMYTSPLKNSI
AIVLSVSGETETIINLTNRAKEEGTKVISITNYPDCTLAKLSDYNLSYFVSTEYRESFNLTTQIPVIHLLESLAKETYKY
IHT

Sequences:

>Translated_243_residues
MMFSNKKISEFSDLEFALYNFIVTHPEKVIYMRIRDLANETHVSPTSILRFCRKLGFDGFTEFKVQLKIYINQTEKLSFI
HSTTTLTEYLERTMQHDYDQRIRMISQSIAAAETIIFIGIGTSGILAEYGSRYFSALKKFSLYIKDPFFPMYTSPLKNSI
AIVLSVSGETETIINLTNRAKEEGTKVISITNYPDCTLAKLSDYNLSYFVSTEYRESFNLTTQIPVIHLLESLAKETYKY
IHT
>Mature_243_residues
MMFSNKKISEFSDLEFALYNFIVTHPEKVIYMRIRDLANETHVSPTSILRFCRKLGFDGFTEFKVQLKIYINQTEKLSFI
HSTTTLTEYLERTMQHDYDQRIRMISQSIAAAETIIFIGIGTSGILAEYGSRYFSALKKFSLYIKDPFFPMYTSPLKNSI
AIVLSVSGETETIINLTNRAKEEGTKVISITNYPDCTLAKLSDYNLSYFVSTEYRESFNLTTQIPVIHLLESLAKETYKY
IHT

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 28076; Mature: 28076

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: PS00356 HTH_LACI_1 ; PS51071 HTH_RPIR ; PS00107 PROTEIN_KINASE_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFSNKKISEFSDLEFALYNFIVTHPEKVIYMRIRDLANETHVSPTSILRFCRKLGFDGF
CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
TEFKVQLKIYINQTEKLSFIHSTTTLTEYLERTMQHDYDQRIRMISQSIAAAETIIFIGI
EEEEEEEEEEECCCHHEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEEEE
GTSGILAEYGSRYFSALKKFSLYIKDPFFPMYTSPLKNSIAIVLSVSGETETIINLTNRA
CCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEEHHHHH
KEEGTKVISITNYPDCTLAKLSDYNLSYFVSTEYRESFNLTTQIPVIHLLESLAKETYKY
HHCCCEEEEEECCCCCEEEEECCCCEEEEEEECHHHHCCCEECCHHHHHHHHHHHHHHHH
IHT
HCC
>Mature Secondary Structure
MMFSNKKISEFSDLEFALYNFIVTHPEKVIYMRIRDLANETHVSPTSILRFCRKLGFDGF
CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
TEFKVQLKIYINQTEKLSFIHSTTTLTEYLERTMQHDYDQRIRMISQSIAAAETIIFIGI
EEEEEEEEEEECCCHHEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEEEE
GTSGILAEYGSRYFSALKKFSLYIKDPFFPMYTSPLKNSIAIVLSVSGETETIINLTNRA
CCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEEHHHHH
KEEGTKVISITNYPDCTLAKLSDYNLSYFVSTEYRESFNLTTQIPVIHLLESLAKETYKY
HHCCCEEEEEECCCCCEEEEECCCCEEEEEEECHHHHCCCEECCHHHHHHHHHHHHHHHH
IHT
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8177218; 11792842 [H]