| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is yeaD [H]
Identifier: 23098169
GI number: 23098169
Start: 756940
End: 758208
Strand: Direct
Name: yeaD [H]
Synonym: OB0714
Alternate gene names: 23098169
Gene position: 756940-758208 (Clockwise)
Preceding gene: 23098168
Following gene: 23098170
Centisome position: 20.85
GC content: 35.15
Gene sequence:
>1269_bases ATGAAGGGGAAGATAAAAGCTACTTGGAATATCTTATGGCTAGTTTTATTAATGGTTATATTATTTAGCTATGCGATGTT TCAAGGTGGATTTGTAAGTTGGTTTTTATTCTATAGCTTTCTTCCACTTTTTCTCTACCAATTACTTTTATCGTTTTATC CATTTAAAAAATGGGAGATAACTCGAGAAATTCCTCGATCAGTGGTTCAAGCTGGTGATGAGATTTATGTCACGATTCAT ATGAAACGAAATTCAGTATTTCCTTTATTCTATTGTTCTATAAAAGAACAACTACCTGATTCTCTAATGATCAGAGATGT CAAAAAGGAAAAATATCGTTCTTTTTCCAATCCTGAACGATTACAAGGGAATCGGACCTTAAACCGAATTGTATTTCCGT TATTTAGAAAGAAGATATCATTTACTTATGCAATCCAGCAAGTTCCTAGAGGTGAGCATCAGTTACAAGCAGTTACGTTA CGTACAGGTGATATTTTTGGTTTGATAAAAAAACAAGTAACGATACCTGTGGAGAATAAGCTCGTTGTATTCCCATATAT CCATGACTTAAAAATAAAAGATCGAATAACGAGTTATGACCAAGGAGCAGTTGCCTCTACTGTAGTGAATCAATCCAACA CAAATATTGCCACTGGTGTTCGAGAGTATGCTCCTGGAGATCGTGTGTCCTGGATTGATTGGAAACAGACTGCACGAAAA CAAGAAGTAATGACAAAGGAATTTGAACAAGAAAAAAGTACGGAAATGCTAGTGGTACTTGATACGTGTAATAGAACTCA ACTGAATCGTTTAGCGTATGAAGCATCTATTGAAATTAGCTCCTCCATATTAATGGAATTCCAAAAAAAGGATCATCAGG CCAATTTCCTTTCAATCGGAAAAGAGTCACACTTTTTTTCATCTCAATACGGAAGAAGTAATCATTCTCCTGTGAATCGC TATTTCATACATGCTCAACCTAGTGGTACACAACCATTTTCTATTCGCCTGAAGGAAGAATTAAAACGAAATAAAAAATC GGAAATTATTTTTATCATTGTCACCCATTTAGATGATTTTTTAATGCAAGTACTGTTAGAAGGAAAGCTTGGGAGAAAAT ATCTGGCGGTAATATTTATTCAGGCAGAGTCACTTATTACTGAAGAAGAACATCGGATTATTCAGCAAATGAAACTTGCG AATATTCATGTACAATTGCTATCTGACCAGCACCTGCTTGAAAGCCCCATCGAGGTGAACTTTAGATGA
Upstream 100 bases:
>100_bases TACTTACATCTGAGGCAAGGTACGAGGGGATTACTAGTGAAGATGCCATTGCATCTATTATCAAATCCACGCATGTCCCA ATAAGGAAGGATACAGCAGA
Downstream 100 bases:
>100_bases AGCTTAAAGGAGAACAATCAAACCAAATAACAACGATATTGCTGTATATCTGTGGATTCTTCTTATTTTTAGAGTGGCTA TACCCGCTTGGGGATATTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MKGKIKATWNILWLVLLMVILFSYAMFQGGFVSWFLFYSFLPLFLYQLLLSFYPFKKWEITREIPRSVVQAGDEIYVTIH MKRNSVFPLFYCSIKEQLPDSLMIRDVKKEKYRSFSNPERLQGNRTLNRIVFPLFRKKISFTYAIQQVPRGEHQLQAVTL RTGDIFGLIKKQVTIPVENKLVVFPYIHDLKIKDRITSYDQGAVASTVVNQSNTNIATGVREYAPGDRVSWIDWKQTARK QEVMTKEFEQEKSTEMLVVLDTCNRTQLNRLAYEASIEISSSILMEFQKKDHQANFLSIGKESHFFSSQYGRSNHSPVNR YFIHAQPSGTQPFSIRLKEELKRNKKSEIIFIIVTHLDDFLMQVLLEGKLGRKYLAVIFIQAESLITEEEHRIIQQMKLA NIHVQLLSDQHLLESPIEVNFR
Sequences:
>Translated_422_residues MKGKIKATWNILWLVLLMVILFSYAMFQGGFVSWFLFYSFLPLFLYQLLLSFYPFKKWEITREIPRSVVQAGDEIYVTIH MKRNSVFPLFYCSIKEQLPDSLMIRDVKKEKYRSFSNPERLQGNRTLNRIVFPLFRKKISFTYAIQQVPRGEHQLQAVTL RTGDIFGLIKKQVTIPVENKLVVFPYIHDLKIKDRITSYDQGAVASTVVNQSNTNIATGVREYAPGDRVSWIDWKQTARK QEVMTKEFEQEKSTEMLVVLDTCNRTQLNRLAYEASIEISSSILMEFQKKDHQANFLSIGKESHFFSSQYGRSNHSPVNR YFIHAQPSGTQPFSIRLKEELKRNKKSEIIFIIVTHLDDFLMQVLLEGKLGRKYLAVIFIQAESLITEEEHRIIQQMKLA NIHVQLLSDQHLLESPIEVNFR >Mature_422_residues MKGKIKATWNILWLVLLMVILFSYAMFQGGFVSWFLFYSFLPLFLYQLLLSFYPFKKWEITREIPRSVVQAGDEIYVTIH MKRNSVFPLFYCSIKEQLPDSLMIRDVKKEKYRSFSNPERLQGNRTLNRIVFPLFRKKISFTYAIQQVPRGEHQLQAVTL RTGDIFGLIKKQVTIPVENKLVVFPYIHDLKIKDRITSYDQGAVASTVVNQSNTNIATGVREYAPGDRVSWIDWKQTARK QEVMTKEFEQEKSTEMLVVLDTCNRTQLNRLAYEASIEISSSILMEFQKKDHQANFLSIGKESHFFSSQYGRSNHSPVNR YFIHAQPSGTQPFSIRLKEELKRNKKSEIIFIIVTHLDDFLMQVLLEGKLGRKYLAVIFIQAESLITEEEHRIIQQMKLA NIHVQLLSDQHLLESPIEVNFR
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002881 [H]
Pfam domain/function: PF01882 DUF58 [H]
EC number: NA
Molecular weight: Translated: 49393; Mature: 49393
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGKIKATWNILWLVLLMVILFSYAMFQGGFVSWFLFYSFLPLFLYQLLLSFYPFKKWEI CCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH TREIPRSVVQAGDEIYVTIHMKRNSVFPLFYCSIKEQLPDSLMIRDVKKEKYRSFSNPER HHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEEHHHHCCHHHHHHHHHHHHHHCCCCHHH LQGNRTLNRIVFPLFRKKISFTYAIQQVPRGEHQLQAVTLRTGDIFGLIKKQVTIPVENK HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHEEEEEECCC LVVFPYIHDLKIKDRITSYDQGAVASTVVNQSNTNIATGVREYAPGDRVSWIDWKQTARK EEEEEEEECCEEHHHHCCCCCCCHHHHHHCCCCCCHHHCHHHHCCCCCEEEECHHHHHHH QEVMTKEFEQEKSTEMLVVLDTCNRTQLNRLAYEASIEISSSILMEFQKKDHQANFLSIG HHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC KESHFFSSQYGRSNHSPVNRYFIHAQPSGTQPFSIRLKEELKRNKKSEIIFIIVTHLDDF CCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEEHHHHCCCCCCCEEEEEHHHHHHH LMQVLLEGKLGRKYLAVIFIQAESLITEEEHRIIQQMKLANIHVQLLSDQHLLESPIEVN HHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHCCCCCCC FR CC >Mature Secondary Structure MKGKIKATWNILWLVLLMVILFSYAMFQGGFVSWFLFYSFLPLFLYQLLLSFYPFKKWEI CCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH TREIPRSVVQAGDEIYVTIHMKRNSVFPLFYCSIKEQLPDSLMIRDVKKEKYRSFSNPER HHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEEHHHHCCHHHHHHHHHHHHHHCCCCHHH LQGNRTLNRIVFPLFRKKISFTYAIQQVPRGEHQLQAVTLRTGDIFGLIKKQVTIPVENK HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHEEEEEECCC LVVFPYIHDLKIKDRITSYDQGAVASTVVNQSNTNIATGVREYAPGDRVSWIDWKQTARK EEEEEEEECCEEHHHHCCCCCCCHHHHHHCCCCCCHHHCHHHHCCCCCEEEECHHHHHHH QEVMTKEFEQEKSTEMLVVLDTCNRTQLNRLAYEASIEISSSILMEFQKKDHQANFLSIG HHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC KESHFFSSQYGRSNHSPVNRYFIHAQPSGTQPFSIRLKEELKRNKKSEIIFIIVTHLDDF CCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEEHHHHCCCCCCCEEEEEHHHHHHH LMQVLLEGKLGRKYLAVIFIQAESLITEEEHRIIQQMKLANIHVQLLSDQHLLESPIEVN HHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHCCCCCCC FR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]