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The map label for this gene is ydbP [H]

Identifier: 23098048

GI number: 23098048

Start: 620621

End: 620941

Strand: Direct

Name: ydbP [H]

Synonym: OB0593

Alternate gene names: 23098048

Gene position: 620621-620941 (Clockwise)

Preceding gene: 23098047

Following gene: 23098049

Centisome position: 17.09

GC content: 33.64

Gene sequence:

>321_bases
ATGGAAGCAATTAAAAGTGTCGAATCGTTTAACGAAATTATTGCTAGTGAGCAACCGGTAATTATTAAATTTTATGCTGA
TTGGTGTCCAGACTGCAAACGTATGGATATGTTTATCGATGGAGTAATCGAAGAATTTAACCATTACGATTGGTATGAAG
TAAATAGTGACGAAGTTGAGGGACTAGCAGAAAAATATGAAGTAATGGGTATTCCGAGTATGCTGATCTTTAAAAATGGT
GAAAAAATTGCACATCAACATAGTGCATATACTAAATCACCTGAATCTGTGTCGGAGTTTTTACATCAACAATTAGATTA
A

Upstream 100 bases:

>100_bases
GGATTAATCATTAGTGTTATTACATTCGGATTAGGTCTCTTTGTAGCGTATATATTAGGTCGAGTTGAGTATAAACAATA
ACAGATGGGAGCGTTGAGTA

Downstream 100 bases:

>100_bases
AATTACATTAAAAAAGCGACCATTCTTCTAGAATGGTCGCTTTTTTGATAATTCCTAGTTTATAATTAAGGAGAAAATGG
CCTTAATTTATATTTATATT

Product: thioredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MEAIKSVESFNEIIASEQPVIIKFYADWCPDCKRMDMFIDGVIEEFNHYDWYEVNSDEVEGLAEKYEVMGIPSMLIFKNG
EKIAHQHSAYTKSPESVSEFLHQQLD

Sequences:

>Translated_106_residues
MEAIKSVESFNEIIASEQPVIIKFYADWCPDCKRMDMFIDGVIEEFNHYDWYEVNSDEVEGLAEKYEVMGIPSMLIFKNG
EKIAHQHSAYTKSPESVSEFLHQQLD
>Mature_106_residues
MEAIKSVESFNEIIASEQPVIIKFYADWCPDCKRMDMFIDGVIEEFNHYDWYEVNSDEVEGLAEKYEVMGIPSMLIFKNG
EKIAHQHSAYTKSPESVSEFLHQQLD

Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI87082331, Length=100, Percent_Identity=32, Blast_Score=64, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6323072, Length=81, Percent_Identity=35.8024691358025, Blast_Score=70, Evalue=7e-14,

Paralogues:

None

Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 12342; Mature: 12342

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAIKSVESFNEIIASEQPVIIKFYADWCPDCKRMDMFIDGVIEEFNHYDWYEVNSDEVE
CHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEECCHHHHH
GLAEKYEVMGIPSMLIFKNGEKIAHQHSAYTKSPESVSEFLHQQLD
HHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MEAIKSVESFNEIIASEQPVIIKFYADWCPDCKRMDMFIDGVIEEFNHYDWYEVNSDEVE
CHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEECCHHHHH
GLAEKYEVMGIPSMLIFKNGEKIAHQHSAYTKSPESVSEFLHQQLD
HHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]