| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is capA [H]
Identifier: 23098046
GI number: 23098046
Start: 618533
End: 619702
Strand: Direct
Name: capA [H]
Synonym: OB0591
Alternate gene names: 23098046
Gene position: 618533-619702 (Clockwise)
Preceding gene: 23098043
Following gene: 23098047
Centisome position: 17.04
GC content: 34.79
Gene sequence:
>1170_bases TTGAAAAGATTATATCGCTTTTTTCCTGTGTCTATAATCACTATTTTTTTCTTATTATTTATGAGTTTTATTGATATTGA AACTGTTGAAAAAAGTTATAATGTTCATGCTGGGCATGCATCATTGTTACAGAAAAAAACGGCTCCAACTATAGAACAAG AGATCAAGGTATCTGCTGTTGGAGATGTTTTAATTCATAGTCCAGTTTATGAAGATGCAAGAGAGCGTGATGGTTTTGAT TTTAATCCAATGTTCAAGCAAGTTAAAACCTATCTTGATTCCTCTACGGTTACGATAGCCAATCAGGAAACGATGATAGG TGGAGAAGAAATGGGATTATCTTCTTATCCGTCATTTAATAGCCCATTTGAGGTTGGAGATGCACTCAAAGAAAATGGGG TTGACATTGTAACGATTGCCAATAATCATACACTAGATCGCGGTGAACAAGCTATAACCAATGCAATTGGCCATTGGCAG TCAATAGATATGTTGTATGAAGGTGCTTATCAGAACAAGGAGGATCAAGAGAAAATAAGAGTACTGGAAACCGAAGAAGG CATTTCTATTGCATCATTAGCTTATACATATGGTACAAATGGAATACCAGTTCCTCAAGGGAAAGAATACTTAGTCGACT TAATAGACCGTAAAAAAATGAAAGAAGAAATTATAAAGGCAAAAAAATTAGCAGATATAGTTGTTCTTTCGCTTCATTTT GGTAATGAGTATGAGCACTATCCTAACCAATCACAGAAAGACTTAGCAAAGTTTGCTGCAGATTTAGGAGTAGACGTTAT TATTGGACATCATCCACATGTACTGCAGCCAATCGACTGGGTGAAAGGGGAAGATGGTTATCAGACTCTAGTTGCGTATT CACTAGGTAATTTTCTTTCTAATCAACAAAAGTATAATCAACGTGTTGGCGGGATATTTGGATTCTCCATAACCAAGAGG GTAAAAGGGGAAGAAGAAAATATAGAAGTTCATTCTCCGACGTTTGTACCTACATATGTGTACTTTGAAAATAATTACAC TAACTTTAGGGTGATCCCCATGTATCAACTTAGGGATGATCAATTAGAAAATGCTCAACAAAAATATGAAGAAACGAAAC AACATATAAATCAATATATAAACGAAGTGGAATTTCTAGAAAAAGAATAA
Upstream 100 bases:
>100_bases TTGTTTTTTTAATCATTAAAAATATAACTGAATTTTGCCGAATGTTATAAATTTTAATCGATAAAATGGTATGATATAGA CTAGTGAAGGAGTGCTGCGT
Downstream 100 bases:
>100_bases ATGGAGATCTTTATTGTATCGTTTCCGTTCATTTTGGTATGATTGATTTGTTCAATTGTTGTTTAAAGAGGAGAAATATT GTTATGGAATGGAAAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MKRLYRFFPVSIITIFFLLFMSFIDIETVEKSYNVHAGHASLLQKKTAPTIEQEIKVSAVGDVLIHSPVYEDARERDGFD FNPMFKQVKTYLDSSTVTIANQETMIGGEEMGLSSYPSFNSPFEVGDALKENGVDIVTIANNHTLDRGEQAITNAIGHWQ SIDMLYEGAYQNKEDQEKIRVLETEEGISIASLAYTYGTNGIPVPQGKEYLVDLIDRKKMKEEIIKAKKLADIVVLSLHF GNEYEHYPNQSQKDLAKFAADLGVDVIIGHHPHVLQPIDWVKGEDGYQTLVAYSLGNFLSNQQKYNQRVGGIFGFSITKR VKGEEENIEVHSPTFVPTYVYFENNYTNFRVIPMYQLRDDQLENAQQKYEETKQHINQYINEVEFLEKE
Sequences:
>Translated_389_residues MKRLYRFFPVSIITIFFLLFMSFIDIETVEKSYNVHAGHASLLQKKTAPTIEQEIKVSAVGDVLIHSPVYEDARERDGFD FNPMFKQVKTYLDSSTVTIANQETMIGGEEMGLSSYPSFNSPFEVGDALKENGVDIVTIANNHTLDRGEQAITNAIGHWQ SIDMLYEGAYQNKEDQEKIRVLETEEGISIASLAYTYGTNGIPVPQGKEYLVDLIDRKKMKEEIIKAKKLADIVVLSLHF GNEYEHYPNQSQKDLAKFAADLGVDVIIGHHPHVLQPIDWVKGEDGYQTLVAYSLGNFLSNQQKYNQRVGGIFGFSITKR VKGEEENIEVHSPTFVPTYVYFENNYTNFRVIPMYQLRDDQLENAQQKYEETKQHINQYINEVEFLEKE >Mature_389_residues MKRLYRFFPVSIITIFFLLFMSFIDIETVEKSYNVHAGHASLLQKKTAPTIEQEIKVSAVGDVLIHSPVYEDARERDGFD FNPMFKQVKTYLDSSTVTIANQETMIGGEEMGLSSYPSFNSPFEVGDALKENGVDIVTIANNHTLDRGEQAITNAIGHWQ SIDMLYEGAYQNKEDQEKIRVLETEEGISIASLAYTYGTNGIPVPQGKEYLVDLIDRKKMKEEIIKAKKLADIVVLSLHF GNEYEHYPNQSQKDLAKFAADLGVDVIIGHHPHVLQPIDWVKGEDGYQTLVAYSLGNFLSNQQKYNQRVGGIFGFSITKR VKGEEENIEVHSPTFVPTYVYFENNYTNFRVIPMYQLRDDQLENAQQKYEETKQHINQYINEVEFLEKE
Specific function: Seems to be required for maximum PGA (gamma-polyglutamic acid) production [H]
COG id: COG2843
COG function: function code M; Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CapA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019079 [H]
Pfam domain/function: PF09587 PGA_cap [H]
EC number: NA
Molecular weight: Translated: 44511; Mature: 44511
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLYRFFPVSIITIFFLLFMSFIDIETVEKSYNVHAGHASLLQKKTAPTIEQEIKVSAV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHH GDVLIHSPVYEDARERDGFDFNPMFKQVKTYLDSSTVTIANQETMIGGEEMGLSSYPSFN HHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEECCCEECCCHHCCCCCCCCCC SPFEVGDALKENGVDIVTIANNHTLDRGEQAITNAIGHWQSIDMLYEGAYQNKEDQEKIR CCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHE VLETEEGISIASLAYTYGTNGIPVPQGKEYLVDLIDRKKMKEEIIKAKKLADIVVLSLHF EEECCCCCEEEHEEHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEC GNEYEHYPNQSQKDLAKFAADLGVDVIIGHHPHVLQPIDWVKGEDGYQTLVAYSLGNFLS CCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHH NQQKYNQRVGGIFGFSITKRVKGEEENIEVHSPTFVPTYVYFENNYTNFRVIPMYQLRDD HHHHHHHHHCCEECHHHHHHHCCCCCCEEEECCCEEEEEEEEECCCCCEEEEEEECCCCH QLENAQQKYEETKQHINQYINEVEFLEKE HHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRLYRFFPVSIITIFFLLFMSFIDIETVEKSYNVHAGHASLLQKKTAPTIEQEIKVSAV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHH GDVLIHSPVYEDARERDGFDFNPMFKQVKTYLDSSTVTIANQETMIGGEEMGLSSYPSFN HHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEECCCEECCCHHCCCCCCCCCC SPFEVGDALKENGVDIVTIANNHTLDRGEQAITNAIGHWQSIDMLYEGAYQNKEDQEKIR CCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHE VLETEEGISIASLAYTYGTNGIPVPQGKEYLVDLIDRKKMKEEIIKAKKLADIVVLSLHF EEECCCCCEEEHEEHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEC GNEYEHYPNQSQKDLAKFAADLGVDVIIGHHPHVLQPIDWVKGEDGYQTLVAYSLGNFLS CCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHH NQQKYNQRVGGIFGFSITKRVKGEEENIEVHSPTFVPTYVYFENNYTNFRVIPMYQLRDD HHHHHHHHHCCEECHHHHHHHCCCCCCEEEECCCEEEEEEEEECCCCCEEEEEEECCCCH QLENAQQKYEETKQHINQYINEVEFLEKE HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 10486244; 11751809; 9384377 [H]