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The map label for this gene is farR [C]

Identifier: 23097884

GI number: 23097884

Start: 455984

End: 456358

Strand: Reverse

Name: farR [C]

Synonym: OB0429

Alternate gene names: 23097884

Gene position: 456358-455984 (Counterclockwise)

Preceding gene: 23097890

Following gene: 23097883

Centisome position: 12.57

GC content: 33.33

Gene sequence:

>375_bases
TTGAACCAGTTTGATAGTGATAAACCAATATTTATTCAAGTTCGAGAAATGATTGAAGATCAAATTGTGAATGACCAGTT
GAAAGAAGGAGATCAAGCTCCTTCAACCAATCAACTTGTCCAGTTTTACAAAATAAATCATGCGACTGTTTCGAAAGGAA
TCAATCAGCTAGTAGAAGAAGACATCTTATTTAAAAAACGAGGTGTAGGTATGTTTGTTATGGAAGGAGCCAAAGAAAAA
TTGATTCAAAAAAGGAAAGAATCTTTTATGGATAACTATGTTATCGGTCTCGTTCAAGAAGCGGAGAAGTTAAAAGTAAC
AGAGCAAGAAATTATTGATTTAATAAAACAGGCAAAAAGGAGGATTCAGCCATGA

Upstream 100 bases:

>100_bases
AATTCCGCTTGCCTATTGACTTTAATCATTTTTAGACTTATAGTTATACACATGAGTATATAACCGTATAACCATAACAG
TGTAATAGGTGGTGAAAACA

Downstream 100 bases:

>100_bases
GTTATGAAATAAAAGTAAATGATTTAACTGTGTGGTATAAAGATTTTAAAGCGCTCGATCAAGTCAGTTTCACACTAAAC
GGAGGAAAGATTCATGGGTT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; Regulatory Protein GntR HTH; Transcription Regulator; Transcriptional Regulator GntR Family Protein; Transcriptional Regulator Gntr Family

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MNQFDSDKPIFIQVREMIEDQIVNDQLKEGDQAPSTNQLVQFYKINHATVSKGINQLVEEDILFKKRGVGMFVMEGAKEK
LIQKRKESFMDNYVIGLVQEAEKLKVTEQEIIDLIKQAKRRIQP

Sequences:

>Translated_124_residues
MNQFDSDKPIFIQVREMIEDQIVNDQLKEGDQAPSTNQLVQFYKINHATVSKGINQLVEEDILFKKRGVGMFVMEGAKEK
LIQKRKESFMDNYVIGLVQEAEKLKVTEQEIIDLIKQAKRRIQP
>Mature_124_residues
MNQFDSDKPIFIQVREMIEDQIVNDQLKEGDQAPSTNQLVQFYKINHATVSKGINQLVEEDILFKKRGVGMFVMEGAKEK
LIQKRKESFMDNYVIGLVQEAEKLKVTEQEIIDLIKQAKRRIQP

Specific function: Possible Transcriptional Regulator Of The Succinyl-CoA- Synthetase Operon. Binds Specifically To The Farr Promoter And Exhibits Weak Binding To The Citrate Synthase And Lipoamide Dehydrogenase Promoters. Binding At The Farr Promoter Is Abolished By Long-

COG id: COG1725

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14425; Mature: 14425

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQFDSDKPIFIQVREMIEDQIVNDQLKEGDQAPSTNQLVQFYKINHATVSKGINQLVEE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DILFKKRGVGMFVMEGAKEKLIQKRKESFMDNYVIGLVQEAEKLKVTEQEIIDLIKQAKR
HHHHHHCCCCCEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
RIQP
HCCC
>Mature Secondary Structure
MNQFDSDKPIFIQVREMIEDQIVNDQLKEGDQAPSTNQLVQFYKINHATVSKGINQLVEE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DILFKKRGVGMFVMEGAKEKLIQKRKESFMDNYVIGLVQEAEKLKVTEQEIIDLIKQAKR
HHHHHHCCCCCEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
RIQP
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA