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The map label for this gene is ytrB [H]

Identifier: 23097883

GI number: 23097883

Start: 455109

End: 455987

Strand: Reverse

Name: ytrB [H]

Synonym: OB0428

Alternate gene names: 23097883

Gene position: 455987-455109 (Counterclockwise)

Preceding gene: 23097884

Following gene: 23097882

Centisome position: 12.56

GC content: 36.18

Gene sequence:

>879_bases
ATGAGTTATGAAATAAAAGTAAATGATTTAACTGTGTGGTATAAAGATTTTAAAGCGCTCGATCAAGTCAGTTTCACACT
AAACGGAGGAAAGATTCATGGGTTGCTCGGAAGAAATGGGGCAGGAAAAACAACACTACTATCCATCCTTTCTAACTTTC
GCAAAGCAAAGGAAGGTACGATAACCATTGATGGGGAAGATCCATTTGACCACCCACGTATCATGCAAGGTACCTCTTTT
ATCTATGATAAAGATCTAACCTATGAATACGATAAAGTAGGTGACATGTTAAAAGAACTCGCCGATTTCCGTCCAAACTT
TGACGCAACCTACGCTAGTGAATTAGTAAAAAAGTTTAAGCTTCCATTAAAAAAGAAAGTTCATCAATTATCGAAGGGAA
AGCAATCAGCACTGCAAGTAACCATTGGTTTAGCATCTCGTACTCCATTAACGATTTTCGATGAAGCATATTTAGGAATG
GATGCTCCAACAAGAGAATTATTTTATAAAGAATTGTTAGCTGATCAAGAAAGACACCCTAGAACAATGATTGTATCCAC
ACATCTAGTATCTGAGATGGATTACCTTTTTGACGAAGTTACCATCATTCATCAAGGGAAGATTCTCTTAAAAGACACGA
ACGAAAATGTTATTTCGAAAGGCTTTTCGATTACAGGAAATAAAGACAATGTAGAGGCATTTACAACTGGACTTGAGGTT
TTAAATAGTCAAATTTTAGGTGGAACCAAATCAGTAATGGTATACGGAGAATTATCTGAACAGAAAAGAAGGCAAGCAAG
AGATTTAGACTTGGATATTGGCCCACTTTCCCTACATGATTTATTTGTACATTTAACAAAGGAGGAAGATGAAGCATGA

Upstream 100 bases:

>100_bases
ATAACTATGTTATCGGTCTCGTTCAAGAAGCGGAGAAGTTAAAAGTAACAGAGCAAGAAATTATTGATTTAATAAAACAG
GCAAAAAGGAGGATTCAGCC

Downstream 100 bases:

>100_bases
ATACAAAAAAACTTGGACTAAGCATATTCAGAGAGCAATTCAAGTGGTCCTTATGGTACGCATTTACGATCCTTCTCATC
TATGTGGCCGTATTATTATA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MSYEIKVNDLTVWYKDFKALDQVSFTLNGGKIHGLLGRNGAGKTTLLSILSNFRKAKEGTITIDGEDPFDHPRIMQGTSF
IYDKDLTYEYDKVGDMLKELADFRPNFDATYASELVKKFKLPLKKKVHQLSKGKQSALQVTIGLASRTPLTIFDEAYLGM
DAPTRELFYKELLADQERHPRTMIVSTHLVSEMDYLFDEVTIIHQGKILLKDTNENVISKGFSITGNKDNVEAFTTGLEV
LNSQILGGTKSVMVYGELSEQKRRQARDLDLDIGPLSLHDLFVHLTKEEDEA

Sequences:

>Translated_292_residues
MSYEIKVNDLTVWYKDFKALDQVSFTLNGGKIHGLLGRNGAGKTTLLSILSNFRKAKEGTITIDGEDPFDHPRIMQGTSF
IYDKDLTYEYDKVGDMLKELADFRPNFDATYASELVKKFKLPLKKKVHQLSKGKQSALQVTIGLASRTPLTIFDEAYLGM
DAPTRELFYKELLADQERHPRTMIVSTHLVSEMDYLFDEVTIIHQGKILLKDTNENVISKGFSITGNKDNVEAFTTGLEV
LNSQILGGTKSVMVYGELSEQKRRQARDLDLDIGPLSLHDLFVHLTKEEDEA
>Mature_291_residues
SYEIKVNDLTVWYKDFKALDQVSFTLNGGKIHGLLGRNGAGKTTLLSILSNFRKAKEGTITIDGEDPFDHPRIMQGTSFI
YDKDLTYEYDKVGDMLKELADFRPNFDATYASELVKKFKLPLKKKVHQLSKGKQSALQVTIGLASRTPLTIFDEAYLGMD
APTRELFYKELLADQERHPRTMIVSTHLVSEMDYLFDEVTIIHQGKILLKDTNENVISKGFSITGNKDNVEAFTTGLEVL
NSQILGGTKSVMVYGELSEQKRRQARDLDLDIGPLSLHDLFVHLTKEEDEA

Specific function: Part of the ABC transporter complex YtrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI21536376, Length=240, Percent_Identity=29.1666666666667, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI45446740, Length=233, Percent_Identity=31.3304721030043, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI47078218, Length=233, Percent_Identity=31.3304721030043, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI105990541, Length=218, Percent_Identity=28.8990825688073, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI9955968, Length=217, Percent_Identity=23.5023041474654, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI9955966, Length=217, Percent_Identity=23.5023041474654, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI45243524, Length=217, Percent_Identity=23.5023041474654, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI116734710, Length=201, Percent_Identity=29.3532338308458, Blast_Score=68, Evalue=8e-12,
Organism=Escherichia coli, GI48994943, Length=225, Percent_Identity=27.5555555555556, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI87081791, Length=213, Percent_Identity=29.5774647887324, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1787712, Length=216, Percent_Identity=24.537037037037, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790739, Length=234, Percent_Identity=23.0769230769231, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1786563, Length=206, Percent_Identity=26.2135922330097, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI48995001, Length=227, Percent_Identity=27.3127753303965, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790525, Length=209, Percent_Identity=30.622009569378, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787547, Length=227, Percent_Identity=23.7885462555066, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1786398, Length=241, Percent_Identity=25.3112033195021, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787370, Length=200, Percent_Identity=24.5, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI87081709, Length=214, Percent_Identity=26.1682242990654, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1789593, Length=224, Percent_Identity=25.8928571428571, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1789991, Length=226, Percent_Identity=25.2212389380531, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=212, Percent_Identity=29.2452830188679, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI71983516, Length=209, Percent_Identity=29.6650717703349, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI71983523, Length=209, Percent_Identity=29.6650717703349, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI71983510, Length=209, Percent_Identity=29.6650717703349, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17510237, Length=213, Percent_Identity=24.4131455399061, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17565586, Length=195, Percent_Identity=24.6153846153846, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24666092, Length=210, Percent_Identity=28.0952380952381, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI116007184, Length=211, Percent_Identity=25.5924170616114, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI221500365, Length=211, Percent_Identity=25.5924170616114, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28574150, Length=193, Percent_Identity=29.5336787564767, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI116007328, Length=193, Percent_Identity=29.5336787564767, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 32988; Mature: 32857

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYEIKVNDLTVWYKDFKALDQVSFTLNGGKIHGLLGRNGAGKTTLLSILSNFRKAKEGT
CCEEEEECCEEEEHHHHHHHHHEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCE
ITIDGEDPFDHPRIMQGTSFIYDKDLTYEYDKVGDMLKELADFRPNFDATYASELVKKFK
EEECCCCCCCCCCEECCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
LPLKKKVHQLSKGKQSALQVTIGLASRTPLTIFDEAYLGMDAPTRELFYKELLADQERHP
CCHHHHHHHHHCCCCCEEEEEEEECCCCCEEEECHHHCCCCCCHHHHHHHHHHHCCCCCC
RTMIVSTHLVSEMDYLFDEVTIIHQGKILLKDTNENVISKGFSITGNKDNVEAFTTGLEV
CEEEEHHHHHHHHHHHHHHEEEEECCEEEEEECCCHHHHCCCEECCCCCCHHHHHHHHHH
LNSQILGGTKSVMVYGELSEQKRRQARDLDLDIGPLSLHDLFVHLTKEEDEA
HHHHHCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCHHHHEEEEECCCCCC
>Mature Secondary Structure 
SYEIKVNDLTVWYKDFKALDQVSFTLNGGKIHGLLGRNGAGKTTLLSILSNFRKAKEGT
CEEEEECCEEEEHHHHHHHHHEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCE
ITIDGEDPFDHPRIMQGTSFIYDKDLTYEYDKVGDMLKELADFRPNFDATYASELVKKFK
EEECCCCCCCCCCEECCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
LPLKKKVHQLSKGKQSALQVTIGLASRTPLTIFDEAYLGMDAPTRELFYKELLADQERHP
CCHHHHHHHHHCCCCCEEEEEEEECCCCCEEEECHHHCCCCCCHHHHHHHHHHHCCCCCC
RTMIVSTHLVSEMDYLFDEVTIIHQGKILLKDTNENVISKGFSITGNKDNVEAFTTGLEV
CEEEEHHHHHHHHHHHHHHEEEEECCEEEEEECCCHHHHCCCEECCCCCCHHHHHHHHHH
LNSQILGGTKSVMVYGELSEQKRRQARDLDLDIGPLSLHDLFVHLTKEEDEA
HHHHHCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCHHHHEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]