| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is yfiZ [H]
Identifier: 23097715
GI number: 23097715
Start: 293239
End: 294273
Strand: Direct
Name: yfiZ [H]
Synonym: OB0260
Alternate gene names: 23097715
Gene position: 293239-294273 (Clockwise)
Preceding gene: 23097714
Following gene: 23097716
Centisome position: 8.08
GC content: 41.64
Gene sequence:
>1035_bases ATGAGTAATATATCCGTCTCAGAAAACAAGCAGTTACATTTACCGAAAAATTTAATAAAGGTACTTATACTTTCCGTTGT ATTGCTGGGTATAAGTATCTTGGCTTCGCTTGCTTTTGGATCTCGTGTAATTGGATGGAATGAATTAATGGATGGTTTGT TTCATCCGGAAGTACAGACCCACGGGGCAAATGTAGTTCGCCAAAGAGTTGCGAGAACTGTATTTAGTTTAATGTGTGGA GCTGCACTTGGAGTTTCAGGAGCGCTAATGCAATCAGTCACTCGTAATCCAATTGCAGACCCTAGTATATTAGGAGTTAA TACTGGTGCAGCGTTATTCGTTGTATGTGGAATTGCCTTTTTTAATATTGGTAGTGCTAGTCACTATATTTGGTTTGCAT TAGTAGGAGCAATCTTAACTGCCATTTTTGTTTTCGGAATTGGTTCGATGGGGAGTGGCGGTGCCACGCCCCTTAAACTC GTTTTAGCGGGTGCTGCCACAAGTGCAGCGTTATCTTCGCTCGTAATGGCAGTTATGATTCCTCGCTCTAGTGTTATGGA TGAGTTTAGATTTTGGCAGGTAGGAAGTGTCGGTGCAGGAGACTGGAACTCTGTTTCTCTCTTTATTCCTTTTCTTTTGA TGGGGATAATCATAGCGATTGCTACTTCACCAGCTCTAAATGCATTAGCATTAGGTGATGAAGCAGCTACAGGATTAGGT GTACGTACTGGGACACTTAGACTTATTGCGGCTTTTGGCGGTGTAATATTGTGTGGTGCAGCGACAGCATTAGCTGGCCC TATTGGTTTTATCGGTTTGTTAGCGACACATGTCATACGACTATTAATTGGACCCGATTTACGATATGTTATCCCTTTAT CTGCTTTAGCAGGGGCTGTTATTTTAACAATATCCGATGTATTTGGACGTATTGTAGGTAGTCCTGGGGAGCTAGAAGTT GGTGTGGTTACAGCCTTTATTGGGGCTCCTATATTAATCTTAATAACTATGAAAGCGAAAATGCGTGCTTTATGA
Upstream 100 bases:
>100_bases CCACTTGCAGCAGCAGGAACTCCAAGCGCTCTTTCCATTCAATATACTATTGACGAATACTTAACTTTACTCTCCGAAGC TGCAAATAAAGTCGAATAAA
Downstream 100 bases:
>100_bases TGAATAATTCAATGAATCTTATTATGATAGGAAGAATAAAGAGACGTCGTCGGTTTATCCTTGTAACATCTTTACTGGCA ATTACTGCTTTTGTGCTAAG
Product: iron ABC transporter permease
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSNISVSENKQLHLPKNLIKVLILSVVLLGISILASLAFGSRVIGWNELMDGLFHPEVQTHGANVVRQRVARTVFSLMCG AALGVSGALMQSVTRNPIADPSILGVNTGAALFVVCGIAFFNIGSASHYIWFALVGAILTAIFVFGIGSMGSGGATPLKL VLAGAATSAALSSLVMAVMIPRSSVMDEFRFWQVGSVGAGDWNSVSLFIPFLLMGIIIAIATSPALNALALGDEAATGLG VRTGTLRLIAAFGGVILCGAATALAGPIGFIGLLATHVIRLLIGPDLRYVIPLSALAGAVILTISDVFGRIVGSPGELEV GVVTAFIGAPILILITMKAKMRAL
Sequences:
>Translated_344_residues MSNISVSENKQLHLPKNLIKVLILSVVLLGISILASLAFGSRVIGWNELMDGLFHPEVQTHGANVVRQRVARTVFSLMCG AALGVSGALMQSVTRNPIADPSILGVNTGAALFVVCGIAFFNIGSASHYIWFALVGAILTAIFVFGIGSMGSGGATPLKL VLAGAATSAALSSLVMAVMIPRSSVMDEFRFWQVGSVGAGDWNSVSLFIPFLLMGIIIAIATSPALNALALGDEAATGLG VRTGTLRLIAAFGGVILCGAATALAGPIGFIGLLATHVIRLLIGPDLRYVIPLSALAGAVILTISDVFGRIVGSPGELEV GVVTAFIGAPILILITMKAKMRAL >Mature_343_residues SNISVSENKQLHLPKNLIKVLILSVVLLGISILASLAFGSRVIGWNELMDGLFHPEVQTHGANVVRQRVARTVFSLMCGA ALGVSGALMQSVTRNPIADPSILGVNTGAALFVVCGIAFFNIGSASHYIWFALVGAILTAIFVFGIGSMGSGGATPLKLV LAGAATSAALSSLVMAVMIPRSSVMDEFRFWQVGSVGAGDWNSVSLFIPFLLMGIIIAIATSPALNALALGDEAATGLGV RTGTLRLIAAFGGVILCGAATALAGPIGFIGLLATHVIRLLIGPDLRYVIPLSALAGAVILTISDVFGRIVGSPGELEVG VVTAFIGAPILILITMKAKMRAL
Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen (Probable) [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786805, Length=279, Percent_Identity=43.010752688172, Blast_Score=185, Evalue=3e-48, Organism=Escherichia coli, GI1790740, Length=320, Percent_Identity=33.125, Blast_Score=142, Evalue=5e-35, Organism=Escherichia coli, GI1790741, Length=277, Percent_Identity=32.8519855595668, Blast_Score=117, Evalue=8e-28, Organism=Escherichia coli, GI1788004, Length=282, Percent_Identity=34.0425531914894, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1786347, Length=320, Percent_Identity=29.375, Blast_Score=100, Evalue=9e-23, Organism=Escherichia coli, GI1786804, Length=280, Percent_Identity=32.1428571428571, Blast_Score=87, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 35385; Mature: 35254
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNISVSENKQLHLPKNLIKVLILSVVLLGISILASLAFGSRVIGWNELMDGLFHPEVQT CCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHH HGANVVRQRVARTVFSLMCGAALGVSGALMQSVTRNPIADPSILGVNTGAALFVVCGIAF HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHH FNIGSASHYIWFALVGAILTAIFVFGIGSMGSGGATPLKLVLAGAATSAALSSLVMAVMI HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHC PRSSVMDEFRFWQVGSVGAGDWNSVSLFIPFLLMGIIIAIATSPALNALALGDEAATGLG CCHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHCCCC VRTGTLRLIAAFGGVILCGAATALAGPIGFIGLLATHVIRLLIGPDLRYVIPLSALAGAV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHH ILTISDVFGRIVGSPGELEVGVVTAFIGAPILILITMKAKMRAL HHHHHHHHHHHCCCCCCEEHHHHHHHHHCHHHHHEEHHHHHHCC >Mature Secondary Structure SNISVSENKQLHLPKNLIKVLILSVVLLGISILASLAFGSRVIGWNELMDGLFHPEVQT CCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHH HGANVVRQRVARTVFSLMCGAALGVSGALMQSVTRNPIADPSILGVNTGAALFVVCGIAF HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHH FNIGSASHYIWFALVGAILTAIFVFGIGSMGSGGATPLKLVLAGAATSAALSSLVMAVMI HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHC PRSSVMDEFRFWQVGSVGAGDWNSVSLFIPFLLMGIIIAIATSPALNALALGDEAATGLG CCHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHCCCC VRTGTLRLIAAFGGVILCGAATALAGPIGFIGLLATHVIRLLIGPDLRYVIPLSALAGAV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHH ILTISDVFGRIVGSPGELEVGVVTAFIGAPILILITMKAKMRAL HHHHHHHHHHHCCCCCCEEHHHHHHHHHCHHHHHEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]