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The map label for this gene is yiaM [C]

Identifier: 23097697

GI number: 23097697

Start: 272656

End: 273177

Strand: Reverse

Name: yiaM [C]

Synonym: OB0242

Alternate gene names: 23097697

Gene position: 273177-272656 (Counterclockwise)

Preceding gene: 23097698

Following gene: 23097696

Centisome position: 7.52

GC content: 35.82

Gene sequence:

>522_bases
ATGAAACTAAATAAATTATTAAATAATTTGGAAGAATATTCGGCCGTGATTTCCCTTCTCATTGCTTCTTTACTAGTCTT
CCTTCAAGTTGTTCTCAGGTATGTATTTAATATTTCTTTAGTCTGGTCAGAAGAGGTTTCAAGATATATCATCATTTGGT
TTGTTTTAGTGGGGAGCAGTATAGCAGTAAGAGAGAAAGCGCATGCGACAGTGGATGCGGTGGTAACCTATCTACCTTAT
ATACTAAAGAGAATATGTTCCATCTTTGCAAGTTTTATAGGGATGACTTTCAGCGTTATTCTTATCTGGTCTGGATCCGT
TACGGTCTCCAATGTTATCGAATTTGGAAATGTAACACCGGCTGTAGGTATTCCAATGTCCATACCATATTTAGCACTTC
CTGTAGGCGGGTTGTTAATGTTCATTCGTTTTCTACAATTACTTATACAAGATGTTACCAATATGAGAAAGAATGATCCT
AATAAAAAACCTCCAATTATAGAAGGGGGAATCAAAGAATGA

Upstream 100 bases:

>100_bases
TGAGAAATTATTGGATGCCATCAATCAATAATCATCATATTAAAGAGCGGTCTAGGCCGTTCTCTCTTTTTTCTTAAATA
GATTCTAAAGGAGTATTTTT

Downstream 100 bases:

>100_bases
TTATTGTTATTTTCATCCTTCTTTTGATTATTGGTGCACCGATTGCTGTAGCAATAGGTTTGTCCAGTTTTGTTGCCATG
ATGCAAGAAGGAGTTTCAAT

Product: C4-dicarboxylate transport system permease small protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MKLNKLLNNLEEYSAVISLLIASLLVFLQVVLRYVFNISLVWSEEVSRYIIIWFVLVGSSIAVREKAHATVDAVVTYLPY
ILKRICSIFASFIGMTFSVILIWSGSVTVSNVIEFGNVTPAVGIPMSIPYLALPVGGLLMFIRFLQLLIQDVTNMRKNDP
NKKPPIIEGGIKE

Sequences:

>Translated_173_residues
MKLNKLLNNLEEYSAVISLLIASLLVFLQVVLRYVFNISLVWSEEVSRYIIIWFVLVGSSIAVREKAHATVDAVVTYLPY
ILKRICSIFASFIGMTFSVILIWSGSVTVSNVIEFGNVTPAVGIPMSIPYLALPVGGLLMFIRFLQLLIQDVTNMRKNDP
NKKPPIIEGGIKE
>Mature_173_residues
MKLNKLLNNLEEYSAVISLLIASLLVFLQVVLRYVFNISLVWSEEVSRYIIIWFVLVGSSIAVREKAHATVDAVVTYLPY
ILKRICSIFASFIGMTFSVILIWSGSVTVSNVIEFGNVTPAVGIPMSIPYLALPVGGLLMFIRFLQLLIQDVTNMRKNDP
NKKPPIIEGGIKE

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter small permease family [H]

Homologues:

Organism=Escherichia coli, GI1790002, Length=153, Percent_Identity=28.7581699346405, Blast_Score=61, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007387 [H]

Pfam domain/function: PF04290 DctQ [H]

EC number: NA

Molecular weight: Translated: 19319; Mature: 19319

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNKLLNNLEEYSAVISLLIASLLVFLQVVLRYVFNISLVWSEEVSRYIIIWFVLVGSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IAVREKAHATVDAVVTYLPYILKRICSIFASFIGMTFSVILIWSGSVTVSNVIEFGNVTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
AVGIPMSIPYLALPVGGLLMFIRFLQLLIQDVTNMRKNDPNKKPPIIEGGIKE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLNKLLNNLEEYSAVISLLIASLLVFLQVVLRYVFNISLVWSEEVSRYIIIWFVLVGSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IAVREKAHATVDAVVTYLPYILKRICSIFASFIGMTFSVILIWSGSVTVSNVIEFGNVTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
AVGIPMSIPYLALPVGGLLMFIRFLQLLIQDVTNMRKNDPNKKPPIIEGGIKE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]