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The map label for this gene is yfkH [H]

Identifier: 23097645

GI number: 23097645

Start: 206591

End: 207439

Strand: Reverse

Name: yfkH [H]

Synonym: OB0190

Alternate gene names: 23097645

Gene position: 207439-206591 (Counterclockwise)

Preceding gene: 23097649

Following gene: 23097639

Centisome position: 5.71

GC content: 34.98

Gene sequence:

>849_bases
ATGAAGATAAAATCCTATGCGCAAACGTTTATCACTAAATTTAAAAATGATGATGTACCATTACTTGCAGCTTCATTAGC
TTATTATTTTTTATTATCTGTTTTCCCGTTACTTGTAGTAGCTTTTGCGATTATCCCTTATTTTAATATAAGTCCACAGG
ATGCCATACAATTTATTTCATCTATCCTTCCTGAACAACTAGCAAGCACGTTTCAAGAAAATATTGTTAGTATTGTGGAG
ACACCTCGTGGGGGCTTACTAACAATTGGTATTTTGGGGACTCTATGGTCCGCTTCCAACGGAATTAACGCATTCATTAA
AGTATCAAATGAATCCTATGAAGTAGAAGAAACTCGCTCCTTTATAAAGACAAGAGCAATTGCCTTTGGACTTACTATTG
CAATGATATTTGCTGTTATTACCGCTATTATACTACCTGTTTTTGGAGATGTCATTCTAACAATGGCCATGTCTATTGTA
GGGATAAATGAATCAACTGAATGGATTCTACAAATTTCACGTTTTGCAATTAGTATCGCCGTAATTACACTATTACTGCT
AACACTTTATCGCTTTGCACCGAATGCGAAACTTCCAGTGAAGCATATTATTCCTGGAACCTTAACAGCTAGCATCCTCT
GGCTTATCATTTCATTCGGATTCTCTATTTATGTATCTAACTTCGGAAATTATTCAAATATGTACGGAAGTCTAGGCGGT
GTCATCATTTTAATGATTTGGTTCTTCTTGACAGGGATGATTCTTCTTATTGGCGGTATCATAAATGTCATGTATCATCA
GAAAAAAGTAGCAGAAGATTCATCGTATTCTCATGCAGCAAATATATAA

Upstream 100 bases:

>100_bases
CTGTCTACAGAAATAAAACGTTTCCTATCTTTAAGTAAGATTAAACTTATTACGGAATGGGTATAGGTTCCATATAGTAC
CAGATATGGAGGTTGACCCG

Downstream 100 bases:

>100_bases
AGAACGGACCAACGCTCGCGTAGAAACGTTACAAAAAAATCCAAACCGACTACCTCTGTCAGTTTGGATTTTTATCATCT
TGATAATATACCTGTTACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MKIKSYAQTFITKFKNDDVPLLAASLAYYFLLSVFPLLVVAFAIIPYFNISPQDAIQFISSILPEQLASTFQENIVSIVE
TPRGGLLTIGILGTLWSASNGINAFIKVSNESYEVEETRSFIKTRAIAFGLTIAMIFAVITAIILPVFGDVILTMAMSIV
GINESTEWILQISRFAISIAVITLLLLTLYRFAPNAKLPVKHIIPGTLTASILWLIISFGFSIYVSNFGNYSNMYGSLGG
VIILMIWFFLTGMILLIGGIINVMYHQKKVAEDSSYSHAANI

Sequences:

>Translated_282_residues
MKIKSYAQTFITKFKNDDVPLLAASLAYYFLLSVFPLLVVAFAIIPYFNISPQDAIQFISSILPEQLASTFQENIVSIVE
TPRGGLLTIGILGTLWSASNGINAFIKVSNESYEVEETRSFIKTRAIAFGLTIAMIFAVITAIILPVFGDVILTMAMSIV
GINESTEWILQISRFAISIAVITLLLLTLYRFAPNAKLPVKHIIPGTLTASILWLIISFGFSIYVSNFGNYSNMYGSLGG
VIILMIWFFLTGMILLIGGIINVMYHQKKVAEDSSYSHAANI
>Mature_282_residues
MKIKSYAQTFITKFKNDDVPLLAASLAYYFLLSVFPLLVVAFAIIPYFNISPQDAIQFISSILPEQLASTFQENIVSIVE
TPRGGLLTIGILGTLWSASNGINAFIKVSNESYEVEETRSFIKTRAIAFGLTIAMIFAVITAIILPVFGDVILTMAMSIV
GINESTEWILQISRFAISIAVITLLLLTLYRFAPNAKLPVKHIIPGTLTASILWLIISFGFSIYVSNFGNYSNMYGSLGG
VIILMIWFFLTGMILLIGGIINVMYHQKKVAEDSSYSHAANI

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 31060; Mature: 31060

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKSYAQTFITKFKNDDVPLLAASLAYYFLLSVFPLLVVAFAIIPYFNISPQDAIQFIS
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
SILPEQLASTFQENIVSIVETPRGGLLTIGILGTLWSASNGINAFIKVSNESYEVEETRS
HHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH
FIKTRAIAFGLTIAMIFAVITAIILPVFGDVILTMAMSIVGINESTEWILQISRFAISIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VITLLLLTLYRFAPNAKLPVKHIIPGTLTASILWLIISFGFSIYVSNFGNYSNMYGSLGG
HHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VIILMIWFFLTGMILLIGGIINVMYHQKKVAEDSSYSHAANI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCC
>Mature Secondary Structure
MKIKSYAQTFITKFKNDDVPLLAASLAYYFLLSVFPLLVVAFAIIPYFNISPQDAIQFIS
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
SILPEQLASTFQENIVSIVETPRGGLLTIGILGTLWSASNGINAFIKVSNESYEVEETRS
HHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH
FIKTRAIAFGLTIAMIFAVITAIILPVFGDVILTMAMSIVGINESTEWILQISRFAISIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VITLLLLTLYRFAPNAKLPVKHIIPGTLTASILWLIISFGFSIYVSNFGNYSNMYGSLGG
HHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VIILMIWFFLTGMILLIGGIINVMYHQKKVAEDSSYSHAANI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]