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The map label for this gene is rep [C]

Identifier: 23097626

GI number: 23097626

Start: 180884

End: 181723

Strand: Reverse

Name: rep [C]

Synonym: OB0171

Alternate gene names: 23097626

Gene position: 181723-180884 (Counterclockwise)

Preceding gene: 23097639

Following gene: 23097624

Centisome position: 5.01

GC content: 33.1

Gene sequence:

>840_bases
ATGGCCGAAAAGAAAAAAAGAGATAATAAAGTACAAGTCTGCCAATCAAATGATTTAATAGAAGCAATTTATGAAGAAGG
CCTAACGGCAACGGAACACAAAATTATTCGATATGCCGTAGCAAAGATTAATAAATCACCAGATCAATTCCCGAATGTAT
CATTTACAGTTCTTGAGTTTATTAATGCTGCCGGTTTATCCGGCAACAGCTATCATGGTAAAGTTAAAAAAATAGTCGGG
GAGCTAAAACGAAAACAAATTCGAATAAAGCCAAGGGAGCACGATTGGGGGTTCCCATGGTTTAAAGAAATCATTTATAA
AAACGGCATGGTGCATATTACGTTTAATGATTTAATCAAGTCTTACTTAATCTACCTTTCGGAACAGGAGAAATATACGA
AATATGCATTTGCCACAATCGGTCACATGCAAAGTCCATATACAATTCGATTATTTGAGCTGCTGCAACAGTATGCCATG
ATTGGTCATAGAAAAATCAAATTAGAAAAACTAAAAGAACTCTTAGGGGTCAAAGGTAAATATAAAGAATACGGTCATTT
TAAATCAAGAATACTACAAAGCGTAAAAAAAGAACTTGATAATATTAACGTTCTTACCTTTACGTTTGAAGAAATAAAAA
TGGTTAGAAGAGTGGACGAAATATATTTTGATATTAAAATAAATGATGATTTAAACACGGCAGGAAATGTAAAAGAAGAT
GAGCTAAAGACGTTCTCGGAAAAACAGGCTAATAAAAAAGAGAATCAGGAAGAGAAAATGACAAATAAGACAATCGACAT
TACACTTCGGATATCTTTAAAGGACGAGACTGATAAGTAA

Upstream 100 bases:

>100_bases
GAGCATCCAAACCATGACACTTGATAACAACTATTAATGCACTATTTTTAATCTGAAATAATAAAGACAATACTAATACT
GTAAGAATTGGAAGGATTAT

Downstream 100 bases:

>100_bases
CGTGAAGGTGTTATAATAATCTTAGGAAGGAATTATTATGCTAGAACGAAGAATCATCAGAGACGTGATTTGCGCTAATT
TTAATAGGAATGCAGTAACA

Product: replication protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MAEKKKRDNKVQVCQSNDLIEAIYEEGLTATEHKIIRYAVAKINKSPDQFPNVSFTVLEFINAAGLSGNSYHGKVKKIVG
ELKRKQIRIKPREHDWGFPWFKEIIYKNGMVHITFNDLIKSYLIYLSEQEKYTKYAFATIGHMQSPYTIRLFELLQQYAM
IGHRKIKLEKLKELLGVKGKYKEYGHFKSRILQSVKKELDNINVLTFTFEEIKMVRRVDEIYFDIKINDDLNTAGNVKED
ELKTFSEKQANKKENQEEKMTNKTIDITLRISLKDETDK

Sequences:

>Translated_279_residues
MAEKKKRDNKVQVCQSNDLIEAIYEEGLTATEHKIIRYAVAKINKSPDQFPNVSFTVLEFINAAGLSGNSYHGKVKKIVG
ELKRKQIRIKPREHDWGFPWFKEIIYKNGMVHITFNDLIKSYLIYLSEQEKYTKYAFATIGHMQSPYTIRLFELLQQYAM
IGHRKIKLEKLKELLGVKGKYKEYGHFKSRILQSVKKELDNINVLTFTFEEIKMVRRVDEIYFDIKINDDLNTAGNVKED
ELKTFSEKQANKKENQEEKMTNKTIDITLRISLKDETDK
>Mature_278_residues
AEKKKRDNKVQVCQSNDLIEAIYEEGLTATEHKIIRYAVAKINKSPDQFPNVSFTVLEFINAAGLSGNSYHGKVKKIVGE
LKRKQIRIKPREHDWGFPWFKEIIYKNGMVHITFNDLIKSYLIYLSEQEKYTKYAFATIGHMQSPYTIRLFELLQQYAMI
GHRKIKLEKLKELLGVKGKYKEYGHFKSRILQSVKKELDNINVLTFTFEEIKMVRRVDEIYFDIKINDDLNTAGNVKEDE
LKTFSEKQANKKENQEEKMTNKTIDITLRISLKDETDK

Specific function: Replication helicase [C]

COG id: COG5527

COG function: function code L; Protein involved in initiation of plasmid replication

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the initiator repB protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000525
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01051 Rep_3 [H]

EC number: NA

Molecular weight: Translated: 32770; Mature: 32639

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKKKRDNKVQVCQSNDLIEAIYEEGLTATEHKIIRYAVAKINKSPDQFPNVSFTVLEF
CCCCCCCCCCEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
INAAGLSGNSYHGKVKKIVGELKRKQIRIKPREHDWGFPWFKEIIYKNGMVHITFNDLIK
HHHCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHCCEEEEEHHHHHH
SYLIYLSEQEKYTKYAFATIGHMQSPYTIRLFELLQQYAMIGHRKIKLEKLKELLGVKGK
HHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCC
YKEYGHFKSRILQSVKKELDNINVLTFTFEEIKMVRRVDEIYFDIKINDDLNTAGNVKED
HHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHEEEEEEECCCCCCCCCCCHH
ELKTFSEKQANKKENQEEKMTNKTIDITLRISLKDETDK
HHHHHHHHHHHHHCCHHHHHCCCEEEEEEEEEECCCCCC
>Mature Secondary Structure 
AEKKKRDNKVQVCQSNDLIEAIYEEGLTATEHKIIRYAVAKINKSPDQFPNVSFTVLEF
CCCCCCCCCEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
INAAGLSGNSYHGKVKKIVGELKRKQIRIKPREHDWGFPWFKEIIYKNGMVHITFNDLIK
HHHCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHCCEEEEEHHHHHH
SYLIYLSEQEKYTKYAFATIGHMQSPYTIRLFELLQQYAMIGHRKIKLEKLKELLGVKGK
HHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCC
YKEYGHFKSRILQSVKKELDNINVLTFTFEEIKMVRRVDEIYFDIKINDDLNTAGNVKED
HHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHEEEEEEECCCCCCCCCCCHH
ELKTFSEKQANKKENQEEKMTNKTIDITLRISLKDETDK
HHHHHHHHHHHHHCCHHHHHCCCEEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycogen synthetase [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2110142 [H]