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The map label for this gene is int [H]

Identifier: 23097608

GI number: 23097608

Start: 160716

End: 161894

Strand: Reverse

Name: int [H]

Synonym: OB0153

Alternate gene names: 23097608

Gene position: 161894-160716 (Counterclockwise)

Preceding gene: 23097609

Following gene: 23097528

Centisome position: 4.46

GC content: 42.49

Gene sequence:

>1179_bases
ATGGCAAACATTAAAAAGTACACAAAGAAAGACGGTACCACCGCTTATATGTTTAATGCTTATCTCGGCAAGGATCCCCT
CACGGGCAAAAAGAAACGAACCACACGCCGAGGTTTCAAGACAAAAAAAGATGCAAATATTGCGTTATCTAAAATATTGG
TTGAAGTCGACGAACTCGGGATCCGCCAAAATGATCAGCTGACCTTCCAGGAAGTTTTTGAAGAATGGTTTAAGCAACAT
CGTAGAGAAGTAAAGCCAACTACGGTGTATGCGATGGAGAGTAAATTCAACCGCAGGATCCTCCCGGTCTTCGGTCCTTA
CAAAATGAAAGACATAACCCGATCGCATTGCCAAAAAGCTATCAACGGTTGGGCCAAGGAGCTTAAAACCTTCAAGGATT
ATAAGATACAAGCAAACCAGGTCTTCCGATATGCTATGAAAATGGACATGATTAAGCGTAACCCGATGGACTATGTCACG
TTACCCAAACTAAAACATGAGATGGAATATGTTGCAGAGCTGGAAGAAAAGAAGCATTACTATACCCGTGAAGAACTCAG
AACCTTTTTAGAGGCGATTCAGAAGGATGACATGGCTTATACCATGTTACGGCTACTCTCCTTCACAGGAGCACGCAAGG
GAGAACTGTATGCCCTGCATTGGTCGGACGTAGACTTCCATCAAAAATCGATCAGCTTGAAAAAGACATTAATTTACACC
GGTGGGGAAAAGCAGCTTCAGACATCGAAAACAAAGGCCTCTCGGCGTATCGTTAGCGTTGACGATGAAACTCTGGCAAT
CTTAAAGAAATGGCGTAGCAAGCAAATACAACGCTATCTGACGTTAGAACTTGCTGCCCCTTTTCAGTCTGATGATAAGC
AGCCCATCTTTACGGTTTATAATCAGTTAAAACATGAAATGGATTATTGTCGACTGGCTTACTTAAATGATAAACTAGAG
CGAATTTATCAAAAGAATCCGGAGCTACCACAAATAAAAGTTCACGAATTCCGGCATACACATGCCAGTTTGTTGTTTGC
AGCCGGGGCTTCTATCAAAGATGTACAATCCCGACTCGGCCACACCGATATTCAAACCACTATGGATATTTACACGCATG
TGACCGATGAAGCGAAAGAGAAAACAGCTGAGATGTTCCAGAAGTACATGACTTTTTAG

Upstream 100 bases:

>100_bases
GAAGAACGCAAAAAAATTAGAAGTATGCTTGAATTGATTTTAGAATAAGTTCTTCTCTTTCCTGTATATAGCCTGCCAGC
GTATTGGAAAGGAAACTATT

Downstream 100 bases:

>100_bases
GCTCGGGGTATTCAAGGGGTATTCAATTCCAAATTAGAACATAAAAAACCCTCTCTGCTCCATAAGAGCAAAGAGGGCAA
AACCTTGATATAACAAGTAT

Product: integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MANIKKYTKKDGTTAYMFNAYLGKDPLTGKKKRTTRRGFKTKKDANIALSKILVEVDELGIRQNDQLTFQEVFEEWFKQH
RREVKPTTVYAMESKFNRRILPVFGPYKMKDITRSHCQKAINGWAKELKTFKDYKIQANQVFRYAMKMDMIKRNPMDYVT
LPKLKHEMEYVAELEEKKHYYTREELRTFLEAIQKDDMAYTMLRLLSFTGARKGELYALHWSDVDFHQKSISLKKTLIYT
GGEKQLQTSKTKASRRIVSVDDETLAILKKWRSKQIQRYLTLELAAPFQSDDKQPIFTVYNQLKHEMDYCRLAYLNDKLE
RIYQKNPELPQIKVHEFRHTHASLLFAAGASIKDVQSRLGHTDIQTTMDIYTHVTDEAKEKTAEMFQKYMTF

Sequences:

>Translated_392_residues
MANIKKYTKKDGTTAYMFNAYLGKDPLTGKKKRTTRRGFKTKKDANIALSKILVEVDELGIRQNDQLTFQEVFEEWFKQH
RREVKPTTVYAMESKFNRRILPVFGPYKMKDITRSHCQKAINGWAKELKTFKDYKIQANQVFRYAMKMDMIKRNPMDYVT
LPKLKHEMEYVAELEEKKHYYTREELRTFLEAIQKDDMAYTMLRLLSFTGARKGELYALHWSDVDFHQKSISLKKTLIYT
GGEKQLQTSKTKASRRIVSVDDETLAILKKWRSKQIQRYLTLELAAPFQSDDKQPIFTVYNQLKHEMDYCRLAYLNDKLE
RIYQKNPELPQIKVHEFRHTHASLLFAAGASIKDVQSRLGHTDIQTTMDIYTHVTDEAKEKTAEMFQKYMTF
>Mature_391_residues
ANIKKYTKKDGTTAYMFNAYLGKDPLTGKKKRTTRRGFKTKKDANIALSKILVEVDELGIRQNDQLTFQEVFEEWFKQHR
REVKPTTVYAMESKFNRRILPVFGPYKMKDITRSHCQKAINGWAKELKTFKDYKIQANQVFRYAMKMDMIKRNPMDYVTL
PKLKHEMEYVAELEEKKHYYTREELRTFLEAIQKDDMAYTMLRLLSFTGARKGELYALHWSDVDFHQKSISLKKTLIYTG
GEKQLQTSKTKASRRIVSVDDETLAILKKWRSKQIQRYLTLELAAPFQSDDKQPIFTVYNQLKHEMDYCRLAYLNDKLER
IYQKNPELPQIKVHEFRHTHASLLFAAGASIKDVQSRLGHTDIQTTMDIYTHVTDEAKEKTAEMFQKYMTF

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 46395; Mature: 46264

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANIKKYTKKDGTTAYMFNAYLGKDPLTGKKKRTTRRGFKTKKDANIALSKILVEVDELG
CCCCHHHHCCCCCEEEEEEHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
IRQNDQLTFQEVFEEWFKQHRREVKPTTVYAMESKFNRRILPVFGPYKMKDITRSHCQKA
CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCEEEECCCCHHHHHHHHHHHHHH
INGWAKELKTFKDYKIQANQVFRYAMKMDMIKRNPMDYVTLPKLKHEMEYVAELEEKKHY
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHH
YTREELRTFLEAIQKDDMAYTMLRLLSFTGARKGELYALHWSDVDFHQKSISLKKTLIYT
HHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHEEEEE
GGEKQLQTSKTKASRRIVSVDDETLAILKKWRSKQIQRYLTLELAAPFQSDDKQPIFTVY
CCCHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHH
NQLKHEMDYCRLAYLNDKLERIYQKNPELPQIKVHEFRHTHASLLFAAGASIKDVQSRLG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHCC
HTDIQTTMDIYTHVTDEAKEKTAEMFQKYMTF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ANIKKYTKKDGTTAYMFNAYLGKDPLTGKKKRTTRRGFKTKKDANIALSKILVEVDELG
CCCHHHHCCCCCEEEEEEHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
IRQNDQLTFQEVFEEWFKQHRREVKPTTVYAMESKFNRRILPVFGPYKMKDITRSHCQKA
CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCEEEECCCCHHHHHHHHHHHHHH
INGWAKELKTFKDYKIQANQVFRYAMKMDMIKRNPMDYVTLPKLKHEMEYVAELEEKKHY
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHH
YTREELRTFLEAIQKDDMAYTMLRLLSFTGARKGELYALHWSDVDFHQKSISLKKTLIYT
HHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHEEEEE
GGEKQLQTSKTKASRRIVSVDDETLAILKKWRSKQIQRYLTLELAAPFQSDDKQPIFTVY
CCCHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHH
NQLKHEMDYCRLAYLNDKLERIYQKNPELPQIKVHEFRHTHASLLFAAGASIKDVQSRLG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHCC
HTDIQTTMDIYTHVTDEAKEKTAEMFQKYMTF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]