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The map label for this gene is yhbQ [C]

Identifier: 23097498

GI number: 23097498

Start: 43584

End: 43844

Strand: Direct

Name: yhbQ [C]

Synonym: OB0043

Alternate gene names: 23097498

Gene position: 43584-43844 (Clockwise)

Preceding gene: 23097497

Following gene: 23097499

Centisome position: 1.2

GC content: 35.63

Gene sequence:

>261_bases
ATGGATGAACAGCATTATGTTTATATATTACGTTGCCGTGATCAATCTTTATATACGGGATATACGAATAATCTAGAGCA
TCGTCTACAAATGCATGAAACGGGGAAGGGTGCTAAGTATACACGTGGTCGAGGACCATTTGAAGTATTGTATGTAAAGA
AATTTATCAATAAATCAGAAGCAATGCAAGAAGAATATCGCATAAAACAGTTACCTCGTTTTGAGAAGCTAAAACTAATC
GAATTCCAAGAACAGGAGTGA

Upstream 100 bases:

>100_bases
GAAGGAATTCGAGATGGAAAAGCAGACATAAAGATTTTACCGCCTCTATACATCTATGAAAGTGATGGAACCTATACGAA
ACAGGCGGAGGAAATTATTT

Downstream 100 bases:

>100_bases
TCACAGGTGAATATACAAAAAAGCTTTGAGAATGAAGATGCTGCTTTGTATGTAGTACCAACACCGATTGGAAATCTTGA
AGACATAACTTATCGTGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MDEQHYVYILRCRDQSLYTGYTNNLEHRLQMHETGKGAKYTRGRGPFEVLYVKKFINKSEAMQEEYRIKQLPRFEKLKLI
EFQEQE

Sequences:

>Translated_86_residues
MDEQHYVYILRCRDQSLYTGYTNNLEHRLQMHETGKGAKYTRGRGPFEVLYVKKFINKSEAMQEEYRIKQLPRFEKLKLI
EFQEQE
>Mature_86_residues
MDEQHYVYILRCRDQSLYTGYTNNLEHRLQMHETGKGAKYTRGRGPFEVLYVKKFINKSEAMQEEYRIKQLPRFEKLKLI
EFQEQE

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family

Homologues:

Organism=Escherichia coli, GI1789545, Length=75, Percent_Identity=40, Blast_Score=70, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y043_OCEIH (Q8EU46)

Other databases:

- EMBL:   BA000028
- RefSeq:   NP_690964.1
- ProteinModelPortal:   Q8EU46
- SMR:   Q8EU46
- GeneID:   1015089
- GenomeReviews:   BA000028_GR
- KEGG:   oih:OB0043
- NMPDR:   fig|221109.1.peg.43
- HOGENOM:   HBG678874
- OMA:   KCKDESL
- BioCyc:   OIHE221109:OB0043-MONOMER
- GO:   GO:0005622
- InterPro:   IPR000305

Pfam domain/function: PF01541 GIY-YIG; SSF82771 UvrC_N

EC number: NA

Molecular weight: Translated: 10521; Mature: 10521

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEQHYVYILRCRDQSLYTGYTNNLEHRLQMHETGKGAKYTRGRGPFEVLYVKKFINKSE
CCCCCEEEEEEECCCCEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCHHH
AMQEEYRIKQLPRFEKLKLIEFQEQE
HHHHHHHHHHCCCCCCEEEEEECCCC
>Mature Secondary Structure
MDEQHYVYILRCRDQSLYTGYTNNLEHRLQMHETGKGAKYTRGRGPFEVLYVKKFINKSE
CCCCCEEEEEEECCCCEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCHHH
AMQEEYRIKQLPRFEKLKLIEFQEQE
HHHHHHHHHHCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376