| Definition | Pseudomonas fluorescens Pf-5 chromosome, complete genome. |
|---|---|
| Accession | NC_004129 |
| Length | 7,074,893 |
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The map label for this gene is sbcC
Identifier: 70730097
GI number:
Start: 3011647
End: 3015291
Strand: Reverse
Name: sbcC
Synonym: PFL_2729
Alternate gene names: NA
Gene position: NA
Preceding gene: 70730098
Following gene: 70730096
Centisome position: NA
GC content: NA
Gene sequence:
>3645_bases ATGAAGATCCTGGCCATCCGCCTGAAGAACCTGGCCTCCCTGGCCGGCCCCTTCGAGATCGACTTCACCGCCGAGCCCCT GGCCAGCGCCGGGCTGTTCGCCATTACCGGGCCCACCGGCGCCGGCAAGAGCACCCTGCTGGATGCCCTGTGCCTGGCGC TGTTCGGCGCGGTGCCGCGGCTGAACAATATCGGCCGCGAGACCAAGGTCCCCGAGGTCGACAGCGAGATCCTCACCAGC GACCCGCGCACCCTGCTGCGCCGCGGCACCGGCAGCGGCTATGCCGAGGTGGATTTTGTCGGCATCGACGGCCGTCGCTA CCGCGCCCGCTGGGAAACCAACCGCGCCCGCGACAAAGCCACCGGCAAGCTGCAAGGCAGCCGGCAGAACCTCACCGACC TTGACAGCGAACAGCTGCTGAGCAACCAGAGCAAGAGCGAATACAAGCAACTGATCGAGGCCCGCCTGGGGCTCAACTTC GAACAGTTCACCCGGGCGGTGATGCTGGCCCAGAGCGAGTTCAGCGCCTTTCTCAAGGCCGACGACAAGGAACGCAGCGA GCTGCTGGAAAAGCTCACCAACACTGCGGTCTACAGCCAGTTGGGGCGCCGCGCCTACAGCAAGAGCAAGGAGGCCGAAG ACGCCCACAAGGAGCTCAAGGCCCAGGCCAGCGGCATCAGCCCGCTGGAGCCCGAGGCCCGGGCCGAGCTTGAACAGCAG TTGAGCCAGGCCCAGCAACAGCTCAAGGAGCAACAGGCCCAGCTCAGGCAGTTGGAAGCCCAGCACGTCTGGCTCAAGGA ACTGCGCCAATGGCAGGAAGCCCGGCAGAGCGCCGCCGAACAACTGCAAGCAGCCGAACAGGACGCCCAGGCCCTGGCCC CGGAGCGCCTGCGCCTGCAACGCCTGGAGCAACTGGCGCCGCAGCGGCACCAGTTCCTGCGCCAGGCAGAGCTGGGCGCC AGCCTGCTGCCGTTGCGCCAGCAGATCCAGCAGCAGGTCGAACAGCAAGGCGCCCTGCAACAACAGCAGGAACGCCTGCA ACAGCAACTGCAGGACGCCGGCACGCCCCTGTCCCAGGCCCAGGAACAGCACAGCACCAGCGCCCCGTTGCTGCGCGAAG CCTTTGCCGAACAGGCCAACCTGGAGCGCCTGGGGCAGAGCCTGGCCCAGGCCGAGGCCCAACGCAGCCGCGCCGAGCAG GCCAGCACCGAGGGCCAGCAAGGCATCCAGCAACTGCTGGAAAAACAGCGCCTGGTGGGCGAACGCCTGGAGCGGATCGC CGGGCAACTGGCCCACAGCGTCGCCCTCGCCCCCTTGAGCGACGCCTGGAACGCCTACCGCGAACGCCTGCAACAGCTGA TGCTGATCGGCAATCGCCTGCACCAGGGCCAGGCCGAACTGCCGGCCCTGGAACAGCGCGCCAGCAGCGCCGCCCAGCAA CTGAGCGAGCAACGCACGCAGCTCGAACTGCTCTACAGCGAAGCCGGGGCCGAGCCCCAGGCGGTGGCCGAGCAGATCCA GTTGCTCGGCACCCTGCTCCAGGACAACCGCAAGCAGCAGCGCGCCGTCGAAGAGCTGGCCCGGCTCTGGGCCCAGCAAC GCGAACTGGACCAGCGCGGCCAGGCCCTGCAGGACAGGCAGCAGGCGGTGGCCGCCCAGCGCGAGGAGCTGAACAAGGTC GGCCTGCAGGCCAAGGCCGAGCTGGTGGTGGCCGAGCAGACCCTGAGCGTCACCCAGGCCCTGCTGGAGCGCCAGCGGCT GGCCCGCAGCGCCAGCGTCGAGGAATTGCGCGCCCAATTGCAGAGCGACCAGCCGTGCCCGGTGTGCGGCAGCGTCGAGC ACCCCTACCACCAGCCTGAAGCCTTGCTGCAGAGCCTCGGGCGCCACGACGAGAACGAGGAAGCCAGCGCCCGCAAGACG GTGGACAGCCTCAAGGAACAGCTCAACGAACTGCGGGCCCAGGTCCAGGGGCTGATCGCCCAGCAGAAGGAATTCCTCCA GCAGCAGGAACAGCTGGCGAGCCAGATGCAGGCCCTGGCCCCAAGCCTGCAAGCCCACCCCTTGAGCGCCAGCCTCCTGG ACCAGGACCCGCCCAAGCGCGACGCCTGGCTGCAACAGCAACTCGACCAGCTGCAGCAGAGCATCACCCAGGACGAAAAC CGCCAGGGCGCCCTGCTGACCCTGCAAAAAGATGCCGCGCGCCTGCAAAACCAGCTGCAGGCGGCAATCGACGCCAGCCA GCAGGCCGCCCAGCACCTGGACAAGCAACAACAGCAACTGAGCGCCGACCGCCAGCGCCTGGACGAGGAACTGGCCAGCT TCAGCCACTTGCTGCCGGCGGAGGTCCTCGACGGCCTGCGCCGCGACCCGGCCAGCACTTTCATGCAGCTCGACCAGCAG GTGCTGCAACGCATCGAGCAACTGCGCGAGCAGCAGGAAGAGGCCGAAGAACAGCAACAGCGCCAGCTGACCCTGGAAAA GGAACAGGACCGCCAGTTGACCCGCCAGCAACAACTGGCCGAGGCCCAACAGCAGTTCGACACCCTGCACCAGCAGCAAC AGGCCTGCCAGCACAGGCTCGCCGAACTGCTGGGCCAGCAGCCCAGCGCCGAGCACTGGCAGCAGCATCTGGAGCAAACC GTGGACCAGGCTCGCAGCGCCCAGGCCCTGGCCCAGCAACAGCAGCAGGCGCTGCACCAGCAAGCGATCGAGTTGGGTGC CGAGCTCAAGGCCCGGGAAGAACGCCTGCAAGCCCTGGAAAGCGAACAACAGCAGCTGGCCGCCAGCATCGAGCAGTGGC GCGCCGGGCACCCGGAACTGGATGACGCCGGCCTGCAACAGCTGCTGGAGCTGGACGAAGAACAGGTGCAGCAACTGCGC CAGCGCCTGCAAGACAACGACAAGGCCATCGAGCAGGCCAAGGTCCTGCTGCAGGAACGCCAGCAGCGCCTGGAACAGCA TCAGGCCCAGCACAACGGCAACCTGGAGACCGAACAACTGGCCCAGGCCCTGGAACAGCTGCAGCAACAGGCCCAGGCCA GCGAACAACAGGTGGCGGACCTGCGTGCACGGCAAAGCGAGGACCAGCGCCGCCAGGCCGCCAACCAGGCCCTCAACCAA CGCCTTGAACAGGCCTACGCCCAGTGGCAGCGCTGGGCCCGGCTCAGCGCCCTGATCGGCTCGGCCGAAGGCGACAAGTT CCGCAAGATCGCCCAGGCCTACAACCTCGACCTGCTGGTGCACCACGCCAATGCCCAACTGCGCCAACTGGTGCGCCGCT ACCGCCTCAAGCGCGGTGGCAGCATGCTCGGCCTGCTGGTGCTGGACACCGAAATGGGCGACGAACTGCGCTCGGTGCAC TCGCTGTCCGGCGGCGAAACCTTCCTGGTGTCCCTGGCCCTGGCCCTGGGGCTGGCCTCCATGGCTTCCAGCACCCTGAA GATCGAATCGCTGTTCATCGACGAAGGCTTCGGCAGCCTCGACCCCGAGTCCCTGCAACTGGCCATGGATGCCCTCGACG GCCTGCAGGCCCAGGGCCGCAAGGTGGCGGTGATCTCCCACGTACAGGAAATGCACGAACGGATTCCGGTACAGATCAAG GTCAGCCGCCAGGGCAATGGCCTGAGCACCCTGGAGGTGAAATGA
Upstream 100 bases:
>100_bases GCCGCGCCTGGCGCGACGCTTACGCCAACGAGGTGGACGAAGCCACCCTCAAGGATTTCGCCCTGCTGTTGCAGGACGTC CAGCAAGAAGGTGAACAGCC
Downstream 100 bases:
>100_bases GCACGCTGCAAACGCCGGGGGCGACCCTCTACTCCTTCCGCCGCTGCCCCTACGCCATGCGTGCGCGGCTGGCCCTGCGC TATGCCGGGGTGCCAATGCG
Product: nuclease SbcCD, C subunit
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1214_residues MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPRLNNIGRETKVPEVDSEILTS DPRTLLRRGTGSGYAEVDFVGIDGRRYRARWETNRARDKATGKLQGSRQNLTDLDSEQLLSNQSKSEYKQLIEARLGLNF EQFTRAVMLAQSEFSAFLKADDKERSELLEKLTNTAVYSQLGRRAYSKSKEAEDAHKELKAQASGISPLEPEARAELEQQ LSQAQQQLKEQQAQLRQLEAQHVWLKELRQWQEARQSAAEQLQAAEQDAQALAPERLRLQRLEQLAPQRHQFLRQAELGA SLLPLRQQIQQQVEQQGALQQQQERLQQQLQDAGTPLSQAQEQHSTSAPLLREAFAEQANLERLGQSLAQAEAQRSRAEQ ASTEGQQGIQQLLEKQRLVGERLERIAGQLAHSVALAPLSDAWNAYRERLQQLMLIGNRLHQGQAELPALEQRASSAAQQ LSEQRTQLELLYSEAGAEPQAVAEQIQLLGTLLQDNRKQQRAVEELARLWAQQRELDQRGQALQDRQQAVAAQREELNKV GLQAKAELVVAEQTLSVTQALLERQRLARSASVEELRAQLQSDQPCPVCGSVEHPYHQPEALLQSLGRHDENEEASARKT VDSLKEQLNELRAQVQGLIAQQKEFLQQQEQLASQMQALAPSLQAHPLSASLLDQDPPKRDAWLQQQLDQLQQSITQDEN RQGALLTLQKDAARLQNQLQAAIDASQQAAQHLDKQQQQLSADRQRLDEELASFSHLLPAEVLDGLRRDPASTFMQLDQQ VLQRIEQLREQQEEAEEQQQRQLTLEKEQDRQLTRQQQLAEAQQQFDTLHQQQQACQHRLAELLGQQPSAEHWQQHLEQT VDQARSAQALAQQQQQALHQQAIELGAELKAREERLQALESEQQQLAASIEQWRAGHPELDDAGLQQLLELDEEQVQQLR QRLQDNDKAIEQAKVLLQERQQRLEQHQAQHNGNLETEQLAQALEQLQQQAQASEQQVADLRARQSEDQRRQAANQALNQ RLEQAYAQWQRWARLSALIGSAEGDKFRKIAQAYNLDLLVHHANAQLRQLVRRYRLKRGGSMLGLLVLDTEMGDELRSVH SLSGGETFLVSLALALGLASMASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIK VSRQGNGLSTLEVK
Sequences:
NA
Specific function: NA
COG id: COG0419
COG function: function code L; ATPase involved in DNA repair
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA