| Definition | Pseudomonas fluorescens Pf-5 chromosome, complete genome. |
|---|---|
| Accession | NC_004129 |
| Length | 7,074,893 |
Click here to switch to the map view.
The map label for this gene is wspR
Identifier: 70728517
GI number:
Start: 1302498
End: 1303499
Strand: Direct
Name: wspR
Synonym: PFL_1135
Alternate gene names: NA
Gene position: NA
Preceding gene: 70728516
Following gene: 70728519
Centisome position: NA
GC content: NA
Gene sequence:
>1002_bases ATGAATGATTTACAGCTCGACGAATTCAAGACCGACGAAAATGCCGCCATGGTGTTGCTGGTGGACGACCAGGCCATGAT CGGCGAAGCGGTGCGGCGTGGGTTGGCGAACGAGGAAAACATCGATTTCCACTTCTGCGCCGATCCGCACCAGGCCATTG CCCAGGCGATCCGCATCAAGCCCACGGTGATTCTCCAGGACTTGGTGATGCCGGGCCTGGACGGCCTGACCCTGGTGCGC GAGTACCGCAACCACCCGGCGACCCAGAACATCCCGATCATCGTTCTCTCCACCAAGGAAGACCCGCTGATCAAGAGCGC GGCCTTTGCCGCCGGGGCCAACGACTACCTGGTCAAGCTGCCGGACAACATCGAGCTGGTGGCGCGCATTCGCTATCACT CCCGTTCCTACATGACCCTGTTGCAGCGTGATGCGGCCTACCGCGCCCTGCGGGTCAGCCAGCAGCAACTGCTGGACACC AACCTGGTGCTGCAACGGCTGATGAACTCCGACGGCCTGACCGGGCTGTCCAACCGCCGGCATTTCGATGAGTACCTGGA GCTGGAGTGGCGGCGGGCGATGCGTGAACAGAGCCAGCTGTCGCTGTTGATGATCGACGTCGACTACTTCAAGACCTACA ACGACACCTTCGGCCACCTGGAGGGCGACGAAGCCCTGCGCAAGGTGGCCACGGCGATTCGCGAGGCCAGCAGCCGGCCT TCCGACCTGCCGGCCCGCTACGGCGGCGAAGAGTTCGTGCTGGTGCTGCCCAATACCTCGCCGGGCGGGGCGCGACTGGT GGCCGAGAAGCTGCGCCAGACGGTGGAAGCCTTGAAAATCCCCCATATCGCGCCGGTGGAGGGCGCGAGCCTGACCATCA GCATCGGTCTTTCCACCGTAACGCCGCAGCCCAACAGCCATTGCCGGCAGTTGATTTCGGCGGCGGACAAGGGGCTGTAC CTGGCCAAGAACAACGGTCGCAACCAGGTCGGGATCGAGTAA
Upstream 100 bases:
>100_bases TCGCCCGCTGGACAAGATCGCTCCACGTTTGCTGGAGATATTTGCCAAATGACTGATAAACGCAGCTGTCCTGGCCAGGT AGCAATTCAGGTGACAACCC
Downstream 100 bases:
>100_bases CCGCCTCAGCTTCCAGGCTGCTCGTCGGTCTCCGGGGCCCGAGTGACGGGCACCAGGGTGTCGCCGAACAGGTAGTAGCT GTGGCTTGCGGTTTGCGAGC
Product: response regulator WspR
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>333_residues MNDLQLDEFKTDENAAMVLLVDDQAMIGEAVRRGLANEENIDFHFCADPHQAIAQAIRIKPTVILQDLVMPGLDGLTLVR EYRNHPATQNIPIIVLSTKEDPLIKSAAFAAGANDYLVKLPDNIELVARIRYHSRSYMTLLQRDAAYRALRVSQQQLLDT NLVLQRLMNSDGLTGLSNRRHFDEYLELEWRRAMREQSQLSLLMIDVDYFKTYNDTFGHLEGDEALRKVATAIREASSRP SDLPARYGGEEFVLVLPNTSPGGARLVAEKLRQTVEALKIPHIAPVEGASLTISIGLSTVTPQPNSHCRQLISAADKGLY LAKNNGRNQVGIE
Sequences:
NA
Specific function: NA
COG id: COG3706
COG function: function code T; Response regulator containing a CheY-like receiver domain and a GGDEF domain
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA