| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 257168074
Identifier: 257168074
GI number: 257168074
Start: 310454
End: 310975
Strand: Direct
Name: 257168074
Synonym: y0291
Alternate gene names: NA
Gene position: 310454-310975 (Clockwise)
Preceding gene: 22124207
Following gene: 161484910
Centisome position: 6.75
GC content: 53.45
Gene sequence:
>522_bases ATGACGCTATCGGTATCGGCATGGGCAATTTCAGAACAGGCAAAGTCAGAACAGGCCACGACCGTACCAAATAATGATAT CGTCTGTCATGTGGCTCACCTCAACGCCCGTTTTGACGATAAAGAGGGGCTATTCGAAGGTGCATCACAAAGCGGTACTT TGCTGATATTACGTAATATTAGCGCTCGAGCCTGCCAGGTTAATGCAATGCCAGTGATCAGTTTCGAAGGCGCAGTTGGC CAGCAGTTGGCCGTCTTTCGCAAAGTACCGCGTGGGATGCGGCAGGAGCCGGTACTCTCACCCGTCACTGTTGCGGCGGG AGCTGAAGTCGCGGTGCAATTGCGTTGGGTGGCCAGTGACGCGTTCGATGGGAATAACTGTGTAACACCTGAGAAAGTGG TGGTGACCCTGCTAGGGGGGACATTGCGTTTACCTTTCGGCCGACAGATGTGTGCGGCATCTGGTGATACTGAATTCTTC AGTCAGGCACCAGTAGGCCCAGCGACCAATGAGGTGCAATGA
Upstream 100 bases:
>100_bases CTGACTTAATTCATTCACATCTTGATGAGGTTTTTTGATGCAAAGAGGCTGCTGTTTTCTCCGTAGTACAACTACCGCTG GAGTGGCTTTGATCGTTGCC
Downstream 100 bases:
>100_bases GTATCGGGAGGGGGCAATATTACGCCAGGATCGCAATCACAGTGGATAGGAGAAGAAGGGGAACCTTCTCCTATCTGTGC ACTAATCCCCGTCAGACAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MTLSVSAWAISEQAKSEQATTVPNNDIVCHVAHLNARFDDKEGLFEGASQSGTLLILRNISARACQVNAMPVISFEGAVG QQLAVFRKVPRGMRQEPVLSPVTVAAGAEVAVQLRWVASDAFDGNNCVTPEKVVVTLLGGTLRLPFGRQMCAASGDTEFF SQAPVGPATNEVQ
Sequences:
>Translated_173_residues MTLSVSAWAISEQAKSEQATTVPNNDIVCHVAHLNARFDDKEGLFEGASQSGTLLILRNISARACQVNAMPVISFEGAVG QQLAVFRKVPRGMRQEPVLSPVTVAAGAEVAVQLRWVASDAFDGNNCVTPEKVVVTLLGGTLRLPFGRQMCAASGDTEFF SQAPVGPATNEVQ >Mature_172_residues TLSVSAWAISEQAKSEQATTVPNNDIVCHVAHLNARFDDKEGLFEGASQSGTLLILRNISARACQVNAMPVISFEGAVGQ QLAVFRKVPRGMRQEPVLSPVTVAAGAEVAVQLRWVASDAFDGNNCVTPEKVVVTLLGGTLRLPFGRQMCAASGDTEFFS QAPVGPATNEVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18356; Mature: 18225
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSVSAWAISEQAKSEQATTVPNNDIVCHVAHLNARFDDKEGLFEGASQSGTLLILRNI CEEEEEHEEHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHCCCCCCCCEEEEECC SARACQVNAMPVISFEGAVGQQLAVFRKVPRGMRQEPVLSPVTVAAGAEVAVQLRWVASD CCCEEEECCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEEEEEECC AFDGNNCVTPEKVVVTLLGGTLRLPFGRQMCAASGDTEFFSQAPVGPATNEVQ CCCCCCCCCHHHEEEEEECCEEECCCCCHHHCCCCCCHHHHCCCCCCCCCCCC >Mature Secondary Structure TLSVSAWAISEQAKSEQATTVPNNDIVCHVAHLNARFDDKEGLFEGASQSGTLLILRNI EEEEEHEEHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHCCCCCCCCEEEEECC SARACQVNAMPVISFEGAVGQQLAVFRKVPRGMRQEPVLSPVTVAAGAEVAVQLRWVASD CCCEEEECCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEEEEEECC AFDGNNCVTPEKVVVTLLGGTLRLPFGRQMCAASGDTEFFSQAPVGPATNEVQ CCCCCCCCCHHHEEEEEECCEEECCCCCHHHCCCCCCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA