Definition Yersinia pestis KIM 10 chromosome, complete genome.
Accession NC_004088
Length 4,600,755

Click here to switch to the map view.

The map label for this gene is yclQ [H]

Identifier: 22127913

GI number: 22127913

Start: 4484454

End: 4485443

Strand: Direct

Name: yclQ [H]

Synonym: y4043

Alternate gene names: 22127913

Gene position: 4484454-4485443 (Clockwise)

Preceding gene: 22127912

Following gene: 22127914

Centisome position: 97.47

GC content: 47.47

Gene sequence:

>990_bases
ATGCTGATTTCTGCATTCCACTTCTCAGGAGAGAAAATGCGATTACGTTTAGCTTTATTTTCGTCATTACTGGCGGCAAC
CTTTGCGATAACAGGCTGTGATCAATCGTCAGAAACCCCTGACAATGCAGCAACAATCAGTATTGAACATGCACAGGGAA
CAACGCTGGTTCCGCTAAACCCACAAAAAGTCGTCATACTGAACCCATCAGTGCTGGATAACGCTGACGCCCTACACATC
AAGGTAGCCGGTGTTCCACAGACCAGCACACATCTACCAGCCTTTTTATCTAAGTACAGCGGCCCTGAGTATATGAATAC
CGGGACACTGTTTGAACCCGATTATGAAGCACTCAGTCAGGCTAAACCTGACCTGATCATCGCGGGTGGGCGTGCTCAAG
ATGCTTATAACAAACTCAGTGCTATCGCTCCAACTATCGCGCTTGATGTTGATACTCAGCACTTTACCCAGAGCCTTACC
CAGCGTACTGAGCAACTGGCCTCAATATTTGGCAAAGAAGAAGAAGCCAAAACACTGCTTGGTAATTTCTCATCACAGGT
AAACGCGATAAAGCAGAAATCGGCTAACGCTGGCTCGGCAATGGTATTGATGATCAGCGGTGGAAAAATGTCGGCTTACA
CCCCCGGTTCCCGTTTTGGTTTTATTTTTGACGAACTGGGATTCACACCTGCGGCCACCTTTGCTGAATCAGGCCGCCAC
GGAAATGTGGTGACATCAGAATTCATTCTTAATGCTAATCCTGACTGGCTGTTCGTCCTTGACCGCGACAATGCGATTGG
CCGGACTGAAGGGCAATCCGCACAACAGGTCCTCGATAACCCGCTGATCCATAAAACTAAAGCATGGCAAAACGATCGCA
TTGTTTATCTCGATTCTGCCTCACTCTATATTGCCGGGGGTGTGCAAAGTTATACACAACTGATGAATAAGGTGAGCGCA
ATACTGGATAAGCCAGTATCAGAGCAGTAA

Upstream 100 bases:

>100_bases
CGCTGCCAATTCAGTAAAAGGGCAAATTACGTTATCTGTTCATCACAAGCATTGATAGGTATCATCTTGGGATTGGTAAT
AAAAATCATTAGCATTACTG

Downstream 100 bases:

>100_bases
CTTTCATCCATGAAAAATTTAAGCTTTGTCGCAGGCCTGGTGATCCTACTGGGCCTGATGATATGCAGCCTATTCATCGG
GGCCGGGCATGTTACGTTCG

Product: solute-binding iron ABC transport protein

Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MLISAFHFSGEKMRLRLALFSSLLAATFAITGCDQSSETPDNAATISIEHAQGTTLVPLNPQKVVILNPSVLDNADALHI
KVAGVPQTSTHLPAFLSKYSGPEYMNTGTLFEPDYEALSQAKPDLIIAGGRAQDAYNKLSAIAPTIALDVDTQHFTQSLT
QRTEQLASIFGKEEEAKTLLGNFSSQVNAIKQKSANAGSAMVLMISGGKMSAYTPGSRFGFIFDELGFTPAATFAESGRH
GNVVTSEFILNANPDWLFVLDRDNAIGRTEGQSAQQVLDNPLIHKTKAWQNDRIVYLDSASLYIAGGVQSYTQLMNKVSA
ILDKPVSEQ

Sequences:

>Translated_329_residues
MLISAFHFSGEKMRLRLALFSSLLAATFAITGCDQSSETPDNAATISIEHAQGTTLVPLNPQKVVILNPSVLDNADALHI
KVAGVPQTSTHLPAFLSKYSGPEYMNTGTLFEPDYEALSQAKPDLIIAGGRAQDAYNKLSAIAPTIALDVDTQHFTQSLT
QRTEQLASIFGKEEEAKTLLGNFSSQVNAIKQKSANAGSAMVLMISGGKMSAYTPGSRFGFIFDELGFTPAATFAESGRH
GNVVTSEFILNANPDWLFVLDRDNAIGRTEGQSAQQVLDNPLIHKTKAWQNDRIVYLDSASLYIAGGVQSYTQLMNKVSA
ILDKPVSEQ
>Mature_329_residues
MLISAFHFSGEKMRLRLALFSSLLAATFAITGCDQSSETPDNAATISIEHAQGTTLVPLNPQKVVILNPSVLDNADALHI
KVAGVPQTSTHLPAFLSKYSGPEYMNTGTLFEPDYEALSQAKPDLIIAGGRAQDAYNKLSAIAPTIALDVDTQHFTQSLT
QRTEQLASIFGKEEEAKTLLGNFSSQVNAIKQKSANAGSAMVLMISGGKMSAYTPGSRFGFIFDELGFTPAATFAESGRH
GNVVTSEFILNANPDWLFVLDRDNAIGRTEGQSAQQVLDNPLIHKTKAWQNDRIVYLDSASLYIAGGVQSYTQLMNKVSA
ILDKPVSEQ

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4607

COG function: function code P; ABC-type enterochelin transport system, periplasmic component

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786807, Length=227, Percent_Identity=26.8722466960352, Blast_Score=61, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 35476; Mature: 35476

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLISAFHFSGEKMRLRLALFSSLLAATFAITGCDQSSETPDNAATISIEHAQGTTLVPLN
CEEEEEECCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEEECCCCEEEECC
PQKVVILNPSVLDNADALHIKVAGVPQTSTHLPAFLSKYSGPEYMNTGTLFEPDYEALSQ
CCEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEECCCHHHHHC
AKPDLIIAGGRAQDAYNKLSAIAPTIALDVDTQHFTQSLTQRTEQLASIFGKEEEAKTLL
CCCCEEEECCCCHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
GNFSSQVNAIKQKSANAGSAMVLMISGGKMSAYTPGSRFGFIFDELGFTPAATFAESGRH
HHHHHHHHHHHHHCCCCCCEEEEEEECCEEEECCCCCCCCHHHHHCCCCHHHHHHHCCCC
GNVVTSEFILNANPDWLFVLDRDNAIGRTEGQSAQQVLDNPLIHKTKAWQNDRIVYLDSA
CCEEEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEECC
SLYIAGGVQSYTQLMNKVSAILDKPVSEQ
CEEEECCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLISAFHFSGEKMRLRLALFSSLLAATFAITGCDQSSETPDNAATISIEHAQGTTLVPLN
CEEEEEECCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEEECCCCEEEECC
PQKVVILNPSVLDNADALHIKVAGVPQTSTHLPAFLSKYSGPEYMNTGTLFEPDYEALSQ
CCEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEECCCHHHHHC
AKPDLIIAGGRAQDAYNKLSAIAPTIALDVDTQHFTQSLTQRTEQLASIFGKEEEAKTLL
CCCCEEEECCCCHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
GNFSSQVNAIKQKSANAGSAMVLMISGGKMSAYTPGSRFGFIFDELGFTPAATFAESGRH
HHHHHHHHHHHHHCCCCCCEEEEEEECCEEEECCCCCCCCHHHHHCCCCHHHHHHHCCCC
GNVVTSEFILNANPDWLFVLDRDNAIGRTEGQSAQQVLDNPLIHKTKAWQNDRIVYLDSA
CCEEEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEECC
SLYIAGGVQSYTQLMNKVSAILDKPVSEQ
CEEEECCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]

Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377; 10658653 [H]