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The map label for this gene is yrdA [H]

Identifier: 22127899

GI number: 22127899

Start: 4466299

End: 4466880

Strand: Reverse

Name: yrdA [H]

Synonym: y4029

Alternate gene names: 22127899

Gene position: 4466880-4466299 (Counterclockwise)

Preceding gene: 22127900

Following gene: 22127893

Centisome position: 97.09

GC content: 43.64

Gene sequence:

>582_bases
TTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACAATCCGCCCTTATCTTCATCATTCACCGAC
TTTAGGTAAACGAGTCATGATCGATAGATCGAGTGTGATCATTGGCAATGTTATTTTAGGTGATGATGTCAGTGTCTGGC
CATTAGTCGCCATTCGTGGCGATGTTAATCAAGTCATCATTGGGGCACGTTCAAATATCCAAGACGGTAGTGTGCTACAT
GTTACCCACCAATCTGAGCATAATCCTGAAGGGTATCCGTTAATCATTGGTGAAGACGTGACTATTGGTCATAAAGCCAT
GCTACACGGCTGTACCATTGGTAACAGAGTATTAGTGGGTATGGGATCTATTCTATTAGATGGAACAATAATAGAAGATG
ATGTAATGATTGGTGCAGGTAGCCTCATTACTCCAGGTAAACGCTTAGTTAGTGGCTATCTTTATGTGGGCAGCCCAGCG
AAGCAAATACGCCCATTAACACCCTTAGAGTTAGAAGGCCTGCTTTACTCTGCTGGCAACTACGTTCGCTGGAAAGATGA
CTATCTGGCAGAGTCTAAATAA

Upstream 100 bases:

>100_bases
ACATGTCGTTCAAATCAAAGGAGAAAGCTATCGACTCAGACAGAAACGAAAGGCCGGGGTTATAGCAGAAGCTAATCCTG
AGTAAAACGGTGGATCAATA

Downstream 100 bases:

>100_bases
CCGAATGATATGCAGGGCGAAATATAACCTCCCTGCATTCATTGGTGTGTGCTTCTATTTACCTAACTCACTGCGTAGCT
GGGCTAATACTGGCGTAATT

Product: transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MGRWWRYKWITFHPSLTIRPYLHHSPTLGKRVMIDRSSVIIGNVILGDDVSVWPLVAIRGDVNQVIIGARSNIQDGSVLH
VTHQSEHNPEGYPLIIGEDVTIGHKAMLHGCTIGNRVLVGMGSILLDGTIIEDDVMIGAGSLITPGKRLVSGYLYVGSPA
KQIRPLTPLELEGLLYSAGNYVRWKDDYLAESK

Sequences:

>Translated_193_residues
MGRWWRYKWITFHPSLTIRPYLHHSPTLGKRVMIDRSSVIIGNVILGDDVSVWPLVAIRGDVNQVIIGARSNIQDGSVLH
VTHQSEHNPEGYPLIIGEDVTIGHKAMLHGCTIGNRVLVGMGSILLDGTIIEDDVMIGAGSLITPGKRLVSGYLYVGSPA
KQIRPLTPLELEGLLYSAGNYVRWKDDYLAESK
>Mature_192_residues
GRWWRYKWITFHPSLTIRPYLHHSPTLGKRVMIDRSSVIIGNVILGDDVSVWPLVAIRGDVNQVIIGARSNIQDGSVLHV
THQSEHNPEGYPLIIGEDVTIGHKAMLHGCTIGNRVLVGMGSILLDGTIIEDDVMIGAGSLITPGKRLVSGYLYVGSPAK
QIRPLTPLELEGLLYSAGNYVRWKDDYLAESK

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=177, Percent_Identity=71.1864406779661, Blast_Score=255, Evalue=1e-69,
Organism=Escherichia coli, GI1787667, Length=150, Percent_Identity=37.3333333333333, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI87081681, Length=146, Percent_Identity=36.986301369863, Blast_Score=101, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21305; Mature: 21174

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRWWRYKWITFHPSLTIRPYLHHSPTLGKRVMIDRSSVIIGNVILGDDVSVWPLVAIRG
CCCEEEEEEEEECCCEEEEEEECCCCCCCCEEEEECCCEEEEEEEECCCCCEEEEEEEEC
DVNQVIIGARSNIQDGSVLHVTHQSEHNPEGYPLIIGEDVTIGHKAMLHGCTIGNRVLVG
CCCEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEECCCEECCCEEEEECCCCCEEEEE
MGSILLDGTIIEDDVMIGAGSLITPGKRLVSGYLYVGSPAKQIRPLTPLELEGLLYSAGN
CCCEEECCEEEECCEEEECCCEECCCHHHEEEEEEECCCHHHCCCCCCEEECEEEECCCC
YVRWKDDYLAESK
EEEECCCCCCCCC
>Mature Secondary Structure 
GRWWRYKWITFHPSLTIRPYLHHSPTLGKRVMIDRSSVIIGNVILGDDVSVWPLVAIRG
CCEEEEEEEEECCCEEEEEEECCCCCCCCEEEEECCCEEEEEEEECCCCCEEEEEEEEC
DVNQVIIGARSNIQDGSVLHVTHQSEHNPEGYPLIIGEDVTIGHKAMLHGCTIGNRVLVG
CCCEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEECCCEECCCEEEEECCCCCEEEEE
MGSILLDGTIIEDDVMIGAGSLITPGKRLVSGYLYVGSPAKQIRPLTPLELEGLLYSAGN
CCCEEECCEEEECCEEEECCCEECCCHHHEEEEEEECCCHHHCCCCCCEEECEEEECCCC
YVRWKDDYLAESK
EEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]