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The map label for this gene is yrfD [C]

Identifier: 22127795

GI number: 22127795

Start: 4384144

End: 4385085

Strand: Direct

Name: yrfD [C]

Synonym: y3925

Alternate gene names: 22127795

Gene position: 4384144-4385085 (Clockwise)

Preceding gene: 22127793

Following gene: 22127797

Centisome position: 95.29

GC content: 51.49

Gene sequence:

>942_bases
ATGGATACGTTCTTTTATTCTGTCTCGACATGGAGGTCGATAAAGATGTACTCACAATATTGGCAGGTAGGGCTAGATAT
TCAAATGGAGGCCATCCGAGCGTTGGCCGTGATACGACGTCGTAATGGCTGGCAACTGCGCTACTGGTGGCATAAAATCT
TACCTTCTGGCGTTTTGCGGGAAGGCATATTACATCAGCCTGATATTCTTAGCGAACAACTCAAATTATTACGTAAACAG
CTGCCTCGACATATTTCATTACGTATTGCTTTGCCCGCACAGCGCATATTGCAGCACACCATTCATGTGCCGGATAGGCG
TCTGCGTGAACCCGAACGTGATGGTTTTATTAAAGCCAGTGCCAGCAGACTATTTCCGGTTAACAGCCAGGCTTTGGCAC
TGGATTACTGCCGCGAAACGGTTGCGAGTAGCGAATTATTGATAACCGCAGCGCGTCAGTCAGAGGTGCAGCAATGGCAA
GCCTGCTTGGAACAGGCGGGTTTATCCTCACAAGTGATTGATATTGCGCCATGCGCTTTACGTTATATGGCAACCGCGAC
CGGTTTATCTGGGCCATATTGGCTGGTTCACCGGTTGGCAAATGAATGGCTGTGGGTATCGTCCAGTGACATGCCATTTC
ATTCCGGGGTGGTGGCTATCGAGACAGAGTGCAGAACGCAGGAAAATGATATTCGCTTGCTGTCGGCCCTATTGGCTCAG
CTCAACATGCGCGGTGCTGGCGAAGATGGCGCGCCTTTGCCGGTGTATTACAGCAGTGTAGTAAAGGAGTCGTTGCCGGA
AAACACACGGTCTTGGTCGCCGCTAACGGCTTTTGCGCACTATCAACCCCCATTACCCGCGTTACCGGCAGCTTTTACTT
TGGCCGGGGGGCTGGCGGTACGTGCGGCAGACTCTTTATCTGCTGCGGGTGCGGGATACTGA

Upstream 100 bases:

>100_bases
ATTAAAAAATACTTTACGAACTTCACCTGAGATTTCCCATTCAATGTCAATTGGGCAGTTTATAAACAACCGCGACGTAG
TATAAAGGCAAGCCCGCACC

Downstream 100 bases:

>100_bases
TGTATCAGGTGAATTTCTTGCCGTGGCGTATTGCCCGGCAACAGGCTCGCTACCGGTTCTGGCGCAATACCATGCTGATC
CAAGGTATTGGCTTGGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MDTFFYSVSTWRSIKMYSQYWQVGLDIQMEAIRALAVIRRRNGWQLRYWWHKILPSGVLREGILHQPDILSEQLKLLRKQ
LPRHISLRIALPAQRILQHTIHVPDRRLREPERDGFIKASASRLFPVNSQALALDYCRETVASSELLITAARQSEVQQWQ
ACLEQAGLSSQVIDIAPCALRYMATATGLSGPYWLVHRLANEWLWVSSSDMPFHSGVVAIETECRTQENDIRLLSALLAQ
LNMRGAGEDGAPLPVYYSSVVKESLPENTRSWSPLTAFAHYQPPLPALPAAFTLAGGLAVRAADSLSAAGAGY

Sequences:

>Translated_313_residues
MDTFFYSVSTWRSIKMYSQYWQVGLDIQMEAIRALAVIRRRNGWQLRYWWHKILPSGVLREGILHQPDILSEQLKLLRKQ
LPRHISLRIALPAQRILQHTIHVPDRRLREPERDGFIKASASRLFPVNSQALALDYCRETVASSELLITAARQSEVQQWQ
ACLEQAGLSSQVIDIAPCALRYMATATGLSGPYWLVHRLANEWLWVSSSDMPFHSGVVAIETECRTQENDIRLLSALLAQ
LNMRGAGEDGAPLPVYYSSVVKESLPENTRSWSPLTAFAHYQPPLPALPAAFTLAGGLAVRAADSLSAAGAGY
>Mature_313_residues
MDTFFYSVSTWRSIKMYSQYWQVGLDIQMEAIRALAVIRRRNGWQLRYWWHKILPSGVLREGILHQPDILSEQLKLLRKQ
LPRHISLRIALPAQRILQHTIHVPDRRLREPERDGFIKASASRLFPVNSQALALDYCRETVASSELLITAARQSEVQQWQ
ACLEQAGLSSQVIDIAPCALRYMATATGLSGPYWLVHRLANEWLWVSSSDMPFHSGVVAIETECRTQENDIRLLSALLAQ
LNMRGAGEDGAPLPVYYSSVVKESLPENTRSWSPLTAFAHYQPPLPALPAAFTLAGGLAVRAADSLSAAGAGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082257, Length=289, Percent_Identity=24.9134948096886, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35134; Mature: 35134

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTFFYSVSTWRSIKMYSQYWQVGLDIQMEAIRALAVIRRRNGWQLRYWWHKILPSGVLR
CCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHCCHHHHH
EGILHQPDILSEQLKLLRKQLPRHISLRIALPAQRILQHTIHVPDRRLREPERDGFIKAS
HCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCHHHHCCCCCCCCEEEC
ASRLFPVNSQALALDYCRETVASSELLITAARQSEVQQWQACLEQAGLSSQVIDIAPCAL
CCCCCCCCCCHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RYMATATGLSGPYWLVHRLANEWLWVSSSDMPFHSGVVAIETECRTQENDIRLLSALLAQ
HHHHHHCCCCCHHHHHHHHHHCEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
LNMRGAGEDGAPLPVYYSSVVKESLPENTRSWSPLTAFAHYQPPLPALPAAFTLAGGLAV
HCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHCCHHE
RAADSLSAAGAGY
EEHHHHCCCCCCC
>Mature Secondary Structure
MDTFFYSVSTWRSIKMYSQYWQVGLDIQMEAIRALAVIRRRNGWQLRYWWHKILPSGVLR
CCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHCCHHHHH
EGILHQPDILSEQLKLLRKQLPRHISLRIALPAQRILQHTIHVPDRRLREPERDGFIKAS
HCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCHHHHCCCCCCCCEEEC
ASRLFPVNSQALALDYCRETVASSELLITAARQSEVQQWQACLEQAGLSSQVIDIAPCAL
CCCCCCCCCCHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RYMATATGLSGPYWLVHRLANEWLWVSSSDMPFHSGVVAIETECRTQENDIRLLSALLAQ
HHHHHHCCCCCHHHHHHHHHHCEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
LNMRGAGEDGAPLPVYYSSVVKESLPENTRSWSPLTAFAHYQPPLPALPAAFTLAGGLAV
HCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHCCHHE
RAADSLSAAGAGY
EEHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA