| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is pfkB [C]
Identifier: 22127741
GI number: 22127741
Start: 4311982
End: 4312848
Strand: Direct
Name: pfkB [C]
Synonym: y3870
Alternate gene names: 22127741
Gene position: 4311982-4312848 (Clockwise)
Preceding gene: 161484731
Following gene: 22127743
Centisome position: 93.72
GC content: 53.52
Gene sequence:
>867_bases TTGCTGACGCTGGCCAAAATGTATACCGGGCTGCCGCTGCAGGCGGTGGGCCTTATTGGCGATGATCATGACGGTGATTA CATTATGGCGATGCTCGACCAGTATCAGGTCAATCGCCAACACGTTCGGCGGACCACCTTGGCTCCAACATCTATGTCAC AAGTCATGACCGATCCGAGCGGCCAGCGCACCTTTTTCCACTCTCCAGGCACCAACCGCCTGCTCGACTTGCCCGCTTTC GATGGCCTTGATACATCATTTAAAATTTTCCATCTTGGCTATCTGCTGTTGCTCGATAGTTTGGATGTGGAAGACACCGA GTACGGTACTCGTAGCGCCAGACTACTGGCGCTGATGTCGCAGCTTGGTTATGAAACCTCCCTCGACTTAGTGTCAAGAG AAGGCGATCCTCGTTATCATTTACTGGTGACGCCAACGTTGTGCTGGCTGGATTATCTGACCATTAATGAACTGGAGGCT GGCGAGTTAAGCGGGCTGGAGATGCGTCTTGCCGATGGCACCCCGGACGTCCATCATATCGCTCAGGCGGCAAAACAATT ACTTGAAGCCGGCGTGCGCCAGCGGGTGGTGATTCACTGCCCGGAAGGTGCATGGGGCGTAGAGCATGGGCAGGAGGGAG CATGGGTGCCTTCGTGGAAACTGGCCCAGGAAGAGATAGTCGGTAGCGTTGGTGCCGGGGATGCCTTTTGCGCTGGCATA TTATATGGCTACCATGAACGCTGGCCGTTAAATGATTGTATTCAATTAGCCCACGCCTGCGCCCGTGCCAATTTACTTTG TGCCAATGCTATTGATGGTGCAAAGCCACTGGCGGAATTAGACGTGTTTATTCGTGAGAACAGTTAA
Upstream 100 bases:
>100_bases GGTCGACCATGTTCATCAAATTGAGCAATGGCCGCAGCGTGGTTGGCTGGCGGAAATCGTACACAGCGAGCGCTCAACCG GCGGCGCACCGCTTAACGTA
Downstream 100 bases:
>100_bases ATAAACCATTACCGCGCCGAATGAACATTATTTTTCACGAGGAAAACGCCAGCAGACGCGTAACTGTTGCAAACGGATAA TGTTGCAAGTGGGTAATGTT
Product: PfkB family carbohydrate kinase
Products: NA
Alternate protein names: PfkB Domain Protein; Sugar Kinase; PfkB Domain-Containing Protein; Kinase; PfkB Family Carbohydrate Kinase; Myo-Inositol Catabolism; PfkB Family Sugar Kinase; Kinase PfkB Family
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MLTLAKMYTGLPLQAVGLIGDDHDGDYIMAMLDQYQVNRQHVRRTTLAPTSMSQVMTDPSGQRTFFHSPGTNRLLDLPAF DGLDTSFKIFHLGYLLLLDSLDVEDTEYGTRSARLLALMSQLGYETSLDLVSREGDPRYHLLVTPTLCWLDYLTINELEA GELSGLEMRLADGTPDVHHIAQAAKQLLEAGVRQRVVIHCPEGAWGVEHGQEGAWVPSWKLAQEEIVGSVGAGDAFCAGI LYGYHERWPLNDCIQLAHACARANLLCANAIDGAKPLAELDVFIRENS
Sequences:
>Translated_288_residues MLTLAKMYTGLPLQAVGLIGDDHDGDYIMAMLDQYQVNRQHVRRTTLAPTSMSQVMTDPSGQRTFFHSPGTNRLLDLPAF DGLDTSFKIFHLGYLLLLDSLDVEDTEYGTRSARLLALMSQLGYETSLDLVSREGDPRYHLLVTPTLCWLDYLTINELEA GELSGLEMRLADGTPDVHHIAQAAKQLLEAGVRQRVVIHCPEGAWGVEHGQEGAWVPSWKLAQEEIVGSVGAGDAFCAGI LYGYHERWPLNDCIQLAHACARANLLCANAIDGAKPLAELDVFIRENS >Mature_288_residues MLTLAKMYTGLPLQAVGLIGDDHDGDYIMAMLDQYQVNRQHVRRTTLAPTSMSQVMTDPSGQRTFFHSPGTNRLLDLPAF DGLDTSFKIFHLGYLLLLDSLDVEDTEYGTRSARLLALMSQLGYETSLDLVSREGDPRYHLLVTPTLCWLDYLTINELEA GELSGLEMRLADGTPDVHHIAQAAKQLLEAGVRQRVVIHCPEGAWGVEHGQEGAWVPSWKLAQEEIVGSVGAGDAFCAGI LYGYHERWPLNDCIQLAHACARANLLCANAIDGAKPLAELDVFIRENS
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31780; Mature: 31780
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLAKMYTGLPLQAVGLIGDDHDGDYIMAMLDQYQVNRQHVRRTTLAPTSMSQVMTDPS CEEHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCC GQRTFFHSPGTNRLLDLPAFDGLDTSFKIFHLGYLLLLDSLDVEDTEYGTRSARLLALMS CCEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH QLGYETSLDLVSREGDPRYHLLVTPTLCWLDYLTINELEAGELSGLEMRLADGTPDVHHI HHCCCCCHHHHHCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHH AQAAKQLLEAGVRQRVVIHCPEGAWGVEHGQEGAWVPSWKLAQEEIVGSVGAGDAFCAGI HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHH LYGYHERWPLNDCIQLAHACARANLLCANAIDGAKPLAELDVFIRENS HHHCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCHHHEEEEEECCC >Mature Secondary Structure MLTLAKMYTGLPLQAVGLIGDDHDGDYIMAMLDQYQVNRQHVRRTTLAPTSMSQVMTDPS CEEHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCC GQRTFFHSPGTNRLLDLPAFDGLDTSFKIFHLGYLLLLDSLDVEDTEYGTRSARLLALMS CCEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH QLGYETSLDLVSREGDPRYHLLVTPTLCWLDYLTINELEAGELSGLEMRLADGTPDVHHI HHCCCCCHHHHHCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHH AQAAKQLLEAGVRQRVVIHCPEGAWGVEHGQEGAWVPSWKLAQEEIVGSVGAGDAFCAGI HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHH LYGYHERWPLNDCIQLAHACARANLLCANAIDGAKPLAELDVFIRENS HHHCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA