Click here to switch to the map view.

The map label for this gene is ygiF [H]

Identifier: 22127401

GI number: 22127401

Start: 3911587

End: 3912768

Strand: Reverse

Name: ygiF [H]

Synonym: y3527

Alternate gene names: 22127401

Gene position: 3912768-3911587 (Counterclockwise)

Preceding gene: 22127404

Following gene: 22127400

Centisome position: 85.05

GC content: 49.92

Gene sequence:

>1182_bases
GTGAATGAAATTATGACCGTTGAAATAGAATTAAAATTTATTGCTACTCCTGCGGCCATTGCTGCTTTGCCGGAGTGGAT
TGAGTCCCAGAAAAACCAGCATTTTCCCCCACAAACACTGGCCAATATCTATTTTGACACGGCGGATAAGCGGTTGCGCC
AGAATGATATCGGTTTACGTATCCGCGGCTATGATGGCCGTTATGAAATGACGGTAAAGACCGGCGGTAAGGTCGTGGGC
GGTTTACATCAGCGGCCTGAATATAATGTCGATATTGATAGCGACCAACTGGATTTAGCGCGTTTCCCGCAGGATATCTG
GCCGGAAGGCTGGGCGGTTGATTTGTTGCAAGCGGAATTACAGCCGTTGTTCCGTACTGATTTCACCCGCGAAAAGTGGG
TAATCACTTACGGTGAGAGCGAGATAGAACTTGCCCTCGACCAAGGTTCTATCAGCGCTGATACGTTGTCGGAACCGTTG
AGTGAGATTGAACTGGAGCTGAAACAGGGCACTCAGGGCGATTTATTGGCACTGGCAGCCGAATTGGCAAAAATGGGTGG
CTTACGCCAGAGCAATTTGAGTAAGGCGGCACGTGGTTATCATCTGGCGCAAGGTAATCCGCCACGTGAGCTACGGCCTT
TCCTGGTATTTCAACCCGTGGCGAAATCAACGGTTGAGCAGGGGATGGCCGGTGGTTTGGAAAGCATATTGGAACACTGG
CAATATCATGAAGAGCTGTGGTTACGTGGGGAACCTGCGGCCAAAACCATGATTATCGACGCTTTGGCTATGGTTCGCCA
ATCGTTGGCTATTTTTGGCGGTTTGGTGCCACGGAAAGCCAGTACAGAGTTACGTGCGTTGCTGATTGCCCTTGAGCCGC
AATTAGAGCCGAAGAGTGTCGATGCAGCGTTGTTGTGTTACAGCGTTGACTATCTGAAATGTAAGTTGGCGCTTACATCA
TGGTTGATCACCGCAGGCTGGCGGCCATTTATGGATGCCAAAGCACAAGCTAAGTTCGATGGCTCGTTTAAACGCTTCTG
TGACATTATGCTCAGCCGCAGTGCCGCCGATTTAAAAGAGGCTTTTGGCCACAATCTTGATGATGATGGCTATTTGGCAC
AACTCCCCCGTCTGAACCGCCAGCTCATCGCCTTCCAACTGCTTTCTGGTTTCTATCCATAA

Upstream 100 bases:

>100_bases
AATAGAGTTTTAGCGGGGGCCGCCAAGCGGGTTTATCTGTACAAAACAGGCAAATCGAAGCGAAAGGTGCATAATGCCCG
TCATCTCGTAACATACCGGT

Downstream 100 bases:

>100_bases
AGTGAATGGCATCCGTATATCGATGCCTGGTTTGGTTTACAGCAGGCGATTATGGCGCGCCAGGGCCACTGGCGAGATAC
TGCCCGCAAAGAAGCACTAT

Product: hypothetical protein

Products: NA

Alternate protein names: ORFXE [H]

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MNEIMTVEIELKFIATPAAIAALPEWIESQKNQHFPPQTLANIYFDTADKRLRQNDIGLRIRGYDGRYEMTVKTGGKVVG
GLHQRPEYNVDIDSDQLDLARFPQDIWPEGWAVDLLQAELQPLFRTDFTREKWVITYGESEIELALDQGSISADTLSEPL
SEIELELKQGTQGDLLALAAELAKMGGLRQSNLSKAARGYHLAQGNPPRELRPFLVFQPVAKSTVEQGMAGGLESILEHW
QYHEELWLRGEPAAKTMIIDALAMVRQSLAIFGGLVPRKASTELRALLIALEPQLEPKSVDAALLCYSVDYLKCKLALTS
WLITAGWRPFMDAKAQAKFDGSFKRFCDIMLSRSAADLKEAFGHNLDDDGYLAQLPRLNRQLIAFQLLSGFYP

Sequences:

>Translated_393_residues
MNEIMTVEIELKFIATPAAIAALPEWIESQKNQHFPPQTLANIYFDTADKRLRQNDIGLRIRGYDGRYEMTVKTGGKVVG
GLHQRPEYNVDIDSDQLDLARFPQDIWPEGWAVDLLQAELQPLFRTDFTREKWVITYGESEIELALDQGSISADTLSEPL
SEIELELKQGTQGDLLALAAELAKMGGLRQSNLSKAARGYHLAQGNPPRELRPFLVFQPVAKSTVEQGMAGGLESILEHW
QYHEELWLRGEPAAKTMIIDALAMVRQSLAIFGGLVPRKASTELRALLIALEPQLEPKSVDAALLCYSVDYLKCKLALTS
WLITAGWRPFMDAKAQAKFDGSFKRFCDIMLSRSAADLKEAFGHNLDDDGYLAQLPRLNRQLIAFQLLSGFYP
>Mature_393_residues
MNEIMTVEIELKFIATPAAIAALPEWIESQKNQHFPPQTLANIYFDTADKRLRQNDIGLRIRGYDGRYEMTVKTGGKVVG
GLHQRPEYNVDIDSDQLDLARFPQDIWPEGWAVDLLQAELQPLFRTDFTREKWVITYGESEIELALDQGSISADTLSEPL
SEIELELKQGTQGDLLALAAELAKMGGLRQSNLSKAARGYHLAQGNPPRELRPFLVFQPVAKSTVEQGMAGGLESILEHW
QYHEELWLRGEPAAKTMIIDALAMVRQSLAIFGGLVPRKASTELRALLIALEPQLEPKSVDAALLCYSVDYLKCKLALTS
WLITAGWRPFMDAKAQAKFDGSFKRFCDIMLSRSAADLKEAFGHNLDDDGYLAQLPRLNRQLIAFQLLSGFYP

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1598 [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=388, Percent_Identity=51.5463917525773, Blast_Score=390, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 44067; Mature: 44067

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEIMTVEIELKFIATPAAIAALPEWIESQKNQHFPPQTLANIYFDTADKRLRQNDIGLR
CCCEEEEEEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
IRGYDGRYEMTVKTGGKVVGGLHQRPEYNVDIDSDQLDLARFPQDIWPEGWAVDLLQAEL
EECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCHHHHHHHHH
QPLFRTDFTREKWVITYGESEIELALDQGSISADTLSEPLSEIELELKQGTQGDLLALAA
HHHHHCCCCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
ELAKMGGLRQSNLSKAARGYHLAQGNPPRELRPFLVFQPVAKSTVEQGMAGGLESILEHW
HHHHHCCCCHHHHHHHHCCCCCCCCCCCHHCCCEEEECHHHHHHHHHHHCCCHHHHHHHH
QYHEELWLRGEPAAKTMIIDALAMVRQSLAIFGGLVPRKASTELRALLIALEPQLEPKSV
HHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEECCCCCCCCC
DAALLCYSVDYLKCKLALTSWLITAGWRPFMDAKAQAKFDGSFKRFCDIMLSRSAADLKE
CHHHHEEHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHH
AFGHNLDDDGYLAQLPRLNRQLIAFQLLSGFYP
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNEIMTVEIELKFIATPAAIAALPEWIESQKNQHFPPQTLANIYFDTADKRLRQNDIGLR
CCCEEEEEEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
IRGYDGRYEMTVKTGGKVVGGLHQRPEYNVDIDSDQLDLARFPQDIWPEGWAVDLLQAEL
EECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCHHHHHHHHH
QPLFRTDFTREKWVITYGESEIELALDQGSISADTLSEPLSEIELELKQGTQGDLLALAA
HHHHHCCCCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
ELAKMGGLRQSNLSKAARGYHLAQGNPPRELRPFLVFQPVAKSTVEQGMAGGLESILEHW
HHHHHCCCCHHHHHHHHCCCCCCCCCCCHHCCCEEEECHHHHHHHHHHHCCCHHHHHHHH
QYHEELWLRGEPAAKTMIIDALAMVRQSLAIFGGLVPRKASTELRALLIALEPQLEPKSV
HHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEECCCCCCCCC
DAALLCYSVDYLKCKLALTSWLITAGWRPFMDAKAQAKFDGSFKRFCDIMLSRSAADLKE
CHHHHEEHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHH
AFGHNLDDDGYLAQLPRLNRQLIAFQLLSGFYP
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8412694; 9278503 [H]