| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is flgL [H]
Identifier: 22127320
GI number: 22127320
Start: 3831788
End: 3832714
Strand: Reverse
Name: flgL [H]
Synonym: y3445
Alternate gene names: 22127320
Gene position: 3832714-3831788 (Counterclockwise)
Preceding gene: 22127321
Following gene: 22127319
Centisome position: 83.31
GC content: 40.24
Gene sequence:
>927_bases TTGATGAGAGTCAGCACTCCAACCATGTCATCTACGATGAATCGGTTTATTACTCAGCACAATGAAAAGCTTGAGAAAAT AAACAAGCAAATGATGACGCAACAGCGTATTACCTTGCCATCAGAAGACCCTATTGCCAGTACCCGGTTATTACAGATCA ATCGTGAACAAGCAAACATCAAGCAGTACAGCAGTAATATTAGTGGGTTATCTAACAGCCTGACTAATCAAACTGGGCAT GTTTCGGCAATTAATAAACAATTGGTCTCGATAAAGAGTAGCCTGGTATCGATCAACGGTAACATTAAGAGCAATAAAGA TATCGCTGGGGTTGCAGATGAATTGAATTACATGCTGGAATCGGTGGTGGCAGGGTTAAATGCCAAAAATAGTGAAGGGC GCTATTTGTTTGCAGGAACAGCAAGTAATAAACAGCCCATTACCTTCGACAGTGCGAAGAATAAATATACGTATGTTGGT AATAGCGATAACCGTCAAACGGGTGTTGGTGAAGGCGTGAAAATTACTGAGAATGTACATTTACAGTCTGGTTTCACTGA TACCAGTGGTGATTTAGCCACGCTAAATAAGTTAAAAAAGTTGTGTGATAATATTAAGAAACCAATTTTACCGGCAGCGG TAGCCAGCCATACCGCGGCAATTGATGAGATGATGGGGCTAATTGATAATGCCTCTGATCATATGGGGGTCACCTTAACT GAGTTAGGGATCAGACAGAAACATAGTCAATTACTGCAAAAAAACCATGAAGAGATGGAGCTGTCGAATGCCACTATTCA AGAAAATTTGGTTGGCCTGGATTTAGCCGAGTCTTATATGGAGTTGATGAATCTGATGGCGGTGACTAATGCCAACTATA CGACGTTCAAACAGATTAATAGCTTGTCACTTTTTAACTTAATTTAA
Upstream 100 bases:
>100_bases CGGGCTTATCAATCCAACATGAAAGTGATTGCGACTGGCGATAAGCTATTTTCTGATCTGTTAGCTTTAGTCTAATTATT ATTTTACTCATAAAGGAATA
Downstream 100 bases:
>100_bases GCTGGGATGTTATGCAGGTAGGACTCAATAGACCGCAATGGGAGGTGGCGAATAAAACCAGCCTCCCGGATTTCGACCGG CTTCAGGGCGCTAATTCACT
Product: flagellar hook-associated protein FlgL
Products: NA
Alternate protein names: HAP3; Hook-filament junction protein [H]
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MMRVSTPTMSSTMNRFITQHNEKLEKINKQMMTQQRITLPSEDPIASTRLLQINREQANIKQYSSNISGLSNSLTNQTGH VSAINKQLVSIKSSLVSINGNIKSNKDIAGVADELNYMLESVVAGLNAKNSEGRYLFAGTASNKQPITFDSAKNKYTYVG NSDNRQTGVGEGVKITENVHLQSGFTDTSGDLATLNKLKKLCDNIKKPILPAAVASHTAAIDEMMGLIDNASDHMGVTLT ELGIRQKHSQLLQKNHEEMELSNATIQENLVGLDLAESYMELMNLMAVTNANYTTFKQINSLSLFNLI
Sequences:
>Translated_308_residues MMRVSTPTMSSTMNRFITQHNEKLEKINKQMMTQQRITLPSEDPIASTRLLQINREQANIKQYSSNISGLSNSLTNQTGH VSAINKQLVSIKSSLVSINGNIKSNKDIAGVADELNYMLESVVAGLNAKNSEGRYLFAGTASNKQPITFDSAKNKYTYVG NSDNRQTGVGEGVKITENVHLQSGFTDTSGDLATLNKLKKLCDNIKKPILPAAVASHTAAIDEMMGLIDNASDHMGVTLT ELGIRQKHSQLLQKNHEEMELSNATIQENLVGLDLAESYMELMNLMAVTNANYTTFKQINSLSLFNLI >Mature_308_residues MMRVSTPTMSSTMNRFITQHNEKLEKINKQMMTQQRITLPSEDPIASTRLLQINREQANIKQYSSNISGLSNSLTNQTGH VSAINKQLVSIKSSLVSINGNIKSNKDIAGVADELNYMLESVVAGLNAKNSEGRYLFAGTASNKQPITFDSAKNKYTYVG NSDNRQTGVGEGVKITENVHLQSGFTDTSGDLATLNKLKKLCDNIKKPILPAAVASHTAAIDEMMGLIDNASDHMGVTLT ELGIRQKHSQLLQKNHEEMELSNATIQENLVGLDLAESYMELMNLMAVTNANYTTFKQINSLSLFNLI
Specific function: Unknown
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Secreted. Bacterial flagellum [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial flagellin family [H]
Homologues:
Organism=Escherichia coli, GI1787324, Length=320, Percent_Identity=22.8125, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013384 - InterPro: IPR001029 [H]
Pfam domain/function: PF00669 Flagellin_N [H]
EC number: NA
Molecular weight: Translated: 33858; Mature: 33858
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRVSTPTMSSTMNRFITQHNEKLEKINKQMMTQQRITLPSEDPIASTRLLQINREQANI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEECCHHHHH KQYSSNISGLSNSLTNQTGHVSAINKQLVSIKSSLVSINGNIKSNKDIAGVADELNYMLE HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHH SVVAGLNAKNSEGRYLFAGTASNKQPITFDSAKNKYTYVGNSDNRQTGVGEGVKITENVH HHHHCCCCCCCCCCEEEEECCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCEEEEEEEE LQSGFTDTSGDLATLNKLKKLCDNIKKPILPAAVASHTAAIDEMMGLIDNASDHMGVTLT EECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEHH ELGIRQKHSQLLQKNHEEMELSNATIQENLVGLDLAESYMELMNLMAVTNANYTTFKQIN HHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC SLSLFNLI CCHHHHCC >Mature Secondary Structure MMRVSTPTMSSTMNRFITQHNEKLEKINKQMMTQQRITLPSEDPIASTRLLQINREQANI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEECCHHHHH KQYSSNISGLSNSLTNQTGHVSAINKQLVSIKSSLVSINGNIKSNKDIAGVADELNYMLE HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHH SVVAGLNAKNSEGRYLFAGTASNKQPITFDSAKNKYTYVGNSDNRQTGVGEGVKITENVH HHHHCCCCCCCCCCEEEEECCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCEEEEEEEE LQSGFTDTSGDLATLNKLKKLCDNIKKPILPAAVASHTAAIDEMMGLIDNASDHMGVTLT EECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEHH ELGIRQKHSQLLQKNHEEMELSNATIQENLVGLDLAESYMELMNLMAVTNANYTTFKQIN HHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC SLSLFNLI CCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2193164; 11677609 [H]