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The map label for this gene is fliC [H]

Identifier: 22127316

GI number: 22127316

Start: 3827295

End: 3828500

Strand: Reverse

Name: fliC [H]

Synonym: y3441

Alternate gene names: 22127316

Gene position: 3828500-3827295 (Counterclockwise)

Preceding gene: 22127319

Following gene: 22127315

Centisome position: 83.21

GC content: 49.75

Gene sequence:

>1206_bases
ATGTCACTGTCTATCCACACGAATGCTTCTGCTAAAACAGCTATCAACAGCCTGAGTAATGAGGGCCTGGCGAATGCCAA
ATCTTCACAGCGTCTGTCTACCGGTTTCCGCATTAACTCACCCGCGGATAACGCGGCGGGTTTGCAGATCACCAACCGTA
TGGAGAAGTTTTTAAACAGCGCGGGTCAGGCTAAACAGAACATTCAAGAATCCATCGCTATGCTGCAAATTGCCGATGGC
GGCTTGGCTGAGTCGGTCAAAACCCTGAACGCCATGAAGAAGTTGGCAACGCAGGCGGCGAACGACACCAACTCTGCGGC
CGACCGCGAGGCTATCCAAAAAGAATTTAGCGAGCTGGGTAAAGAGCTGCAAAACGCGCTGAACAACACCGAATATAACT
CCGAGAAGCTGTTTGCTGATGGCGGCAAAATGCGTAAGGAATTGAACTTCCAGAGCGGTACCGATGCAGAATCCAGCCTG
AAATTAGATCTGAATAGTGTGATTGCAGAGCTGACGGAGAGTGTGACCAAACCGGGGCTTAAAGCCAATAGTGGTGGTAC
GGCAGAGGAAAAAGAACTCGCGAGATTGGAGGGGTTAGCAAAGGATGCTAAGAGCACGGCGGCGACGACTAAGTCAGCAG
AAACCACATTACTAGTCGATGATGCTACCGGTAAGGGGGGTAAGGGGGGTAATGCTTCCATTGATATTATTATTCCAGCA
CACAAAGATACCACTGGTAAGGATGTAGCGGAGAAAAAAATTGCCTCAGGTACCGCTATCACACCAGCGAATATCACCTC
GATGGCCGACGCAAAGGCTTATTGGGACAAGCAAGAAATAGAGACTCCGAAGGCTGTGAATGAATACGTTGTCAAACATT
CTGCGGATAGCGGTGTCATGAATATGCAATTGGCCGATAAAGATCTGGCGATGAAGGCAGATAAAAAGCTGTCAGACGTG
ATTGATGCCTATGGTGCTTTCCGTGCCACGCTGGGGGCGAACCAAAACCGCCTGCAATCCTCTTCCAATAACCTGGATAA
CATGATCAGCAACACCGCGCAGGCGCTGGGCAGCATCAAAGATACCGATTTTGCGGATGAGATGAAAAACCACGCGCAGA
GCGAAATGTTAATGCAATCGAGCGTGATGATGCTGAAAAAAGCCAACGCCGCAACGCAGTTGATTTCGACCCTGCTGCAA
GGTTAA

Upstream 100 bases:

>100_bases
AATTTGCATGTCAGGTTTAATGATTCACACAACCGTGCCGTTTTATTCTACTACTACGGGAGCTAACAGGTAGCCCCGGT
ATTATAAGAGAATCGCACTT

Downstream 100 bases:

>100_bases
TAAACCGCCATCCTTCGCGTTGCAGGGGGGGTACTCAGTGCACTGAACCCCAGATCTTGGATCTTTTTATCCATGATCTG
GAGGTTCGGTTCAATGAAAC

Product: lateral flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MSLSIHTNASAKTAINSLSNEGLANAKSSQRLSTGFRINSPADNAAGLQITNRMEKFLNSAGQAKQNIQESIAMLQIADG
GLAESVKTLNAMKKLATQAANDTNSAADREAIQKEFSELGKELQNALNNTEYNSEKLFADGGKMRKELNFQSGTDAESSL
KLDLNSVIAELTESVTKPGLKANSGGTAEEKELARLEGLAKDAKSTAATTKSAETTLLVDDATGKGGKGGNASIDIIIPA
HKDTTGKDVAEKKIASGTAITPANITSMADAKAYWDKQEIETPKAVNEYVVKHSADSGVMNMQLADKDLAMKADKKLSDV
IDAYGAFRATLGANQNRLQSSSNNLDNMISNTAQALGSIKDTDFADEMKNHAQSEMLMQSSVMMLKKANAATQLISTLLQ
G

Sequences:

>Translated_401_residues
MSLSIHTNASAKTAINSLSNEGLANAKSSQRLSTGFRINSPADNAAGLQITNRMEKFLNSAGQAKQNIQESIAMLQIADG
GLAESVKTLNAMKKLATQAANDTNSAADREAIQKEFSELGKELQNALNNTEYNSEKLFADGGKMRKELNFQSGTDAESSL
KLDLNSVIAELTESVTKPGLKANSGGTAEEKELARLEGLAKDAKSTAATTKSAETTLLVDDATGKGGKGGNASIDIIIPA
HKDTTGKDVAEKKIASGTAITPANITSMADAKAYWDKQEIETPKAVNEYVVKHSADSGVMNMQLADKDLAMKADKKLSDV
IDAYGAFRATLGANQNRLQSSSNNLDNMISNTAQALGSIKDTDFADEMKNHAQSEMLMQSSVMMLKKANAATQLISTLLQ
G
>Mature_400_residues
SLSIHTNASAKTAINSLSNEGLANAKSSQRLSTGFRINSPADNAAGLQITNRMEKFLNSAGQAKQNIQESIAMLQIADGG
LAESVKTLNAMKKLATQAANDTNSAADREAIQKEFSELGKELQNALNNTEYNSEKLFADGGKMRKELNFQSGTDAESSLK
LDLNSVIAELTESVTKPGLKANSGGTAEEKELARLEGLAKDAKSTAATTKSAETTLLVDDATGKGGKGGNASIDIIIPAH
KDTTGKDVAEKKIASGTAITPANITSMADAKAYWDKQEIETPKAVNEYVVKHSADSGVMNMQLADKDLAMKADKKLSDVI
DAYGAFRATLGANQNRLQSSSNNLDNMISNTAQALGSIKDTDFADEMKNHAQSEMLMQSSVMMLKKANAATQLISTLLQG

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=170, Percent_Identity=30.5882352941176, Blast_Score=75, Evalue=9e-15,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 42459; Mature: 42328

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSIHTNASAKTAINSLSNEGLANAKSSQRLSTGFRINSPADNAAGLQITNRMEKFLNS
CEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHH
AGQAKQNIQESIAMLQIADGGLAESVKTLNAMKKLATQAANDTNSAADREAIQKEFSELG
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
KELQNALNNTEYNSEKLFADGGKMRKELNFQSGTDAESSLKLDLNSVIAELTESVTKPGL
HHHHHHHCCCCCCCCCEECCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
KANSGGTAEEKELARLEGLAKDAKSTAATTKSAETTLLVDDATGKGGKGGNASIDIIIPA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEEEC
HKDTTGKDVAEKKIASGTAITPANITSMADAKAYWDKQEIETPKAVNEYVVKHSADSGVM
CCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCCCCEE
NMQLADKDLAMKADKKLSDVIDAYGAFRATLGANQNRLQSSSNNLDNMISNTAQALGSIK
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCC
DTDFADEMKNHAQSEMLMQSSVMMLKKANAATQLISTLLQG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLSIHTNASAKTAINSLSNEGLANAKSSQRLSTGFRINSPADNAAGLQITNRMEKFLNS
EEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHH
AGQAKQNIQESIAMLQIADGGLAESVKTLNAMKKLATQAANDTNSAADREAIQKEFSELG
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
KELQNALNNTEYNSEKLFADGGKMRKELNFQSGTDAESSLKLDLNSVIAELTESVTKPGL
HHHHHHHCCCCCCCCCEECCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
KANSGGTAEEKELARLEGLAKDAKSTAATTKSAETTLLVDDATGKGGKGGNASIDIIIPA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEEEC
HKDTTGKDVAEKKIASGTAITPANITSMADAKAYWDKQEIETPKAVNEYVVKHSADSGVM
CCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCCCCEE
NMQLADKDLAMKADKKLSDVIDAYGAFRATLGANQNRLQSSSNNLDNMISNTAQALGSIK
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCC
DTDFADEMKNHAQSEMLMQSSVMMLKKANAATQLISTLLQG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2123866; 9620973; 7682214 [H]