| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
Click here to switch to the map view.
The map label for this gene is insA1 [C]
Identifier: 22127233
GI number: 22127233
Start: 3699323
End: 3699445
Strand: Reverse
Name: insA1 [C]
Synonym: y3357
Alternate gene names: 22127233
Gene position: 3699445-3699323 (Counterclockwise)
Preceding gene: 22127235
Following gene: 22127232
Centisome position: 80.41
GC content: 45.53
Gene sequence:
>123_bases ATGAAAGAGCAAATTGTCGATCTTGCTATGAACAATGCCGGTATTCGTGATACTGCACGGGCGTTGCATATCAGTATCAA TGCGGTCATGCGCACTTTAAAAAACTCTCGCCGCAGCGTGTAA
Upstream 100 bases:
>100_bases AAAGCACGGGCCAGAACGCACAGGGCATCAGCGCTACCGCTGTCAGGCCTGCCGACGGAGCTTTCAACTAGAGTACGAGT ATCGTGCCTGCTACCCCGGT
Downstream 100 bases:
>100_bases CCACGCTCCCACTGGATAACCTGCAAATTCAGCTTATCTGTGAAGTCGATGAAATGTGGTCATTTGTGGGCAACAAAAAG CAGCAACGTTGGCTTTGGTA
Product: transposase
Products: NA
Alternate protein names: Transposase
Number of amino acids: Translated: 40; Mature: 40
Protein sequence:
>40_residues MKEQIVDLAMNNAGIRDTARALHISINAVMRTLKNSRRSV
Sequences:
>Translated_40_residues MKEQIVDLAMNNAGIRDTARALHISINAVMRTLKNSRRSV >Mature_40_residues MKEQIVDLAMNNAGIRDTARALHISINAVMRTLKNSRRSV
Specific function: Absolutely required for transposition of is1 [C]
COG id: COG3677
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4495; Mature: 4495
Theoretical pI: Translated: 11.96; Mature: 11.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.5 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.5 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEQIVDLAMNNAGIRDTARALHISINAVMRTLKNSRRSV CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKEQIVDLAMNNAGIRDTARALHISINAVMRTLKNSRRSV CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA