Definition Yersinia pestis KIM 10 chromosome, complete genome.
Accession NC_004088
Length 4,600,755

Click here to switch to the map view.

The map label for this gene is 22127229

Identifier: 22127229

GI number: 22127229

Start: 3695454

End: 3697751

Strand: Reverse

Name: 22127229

Synonym: y3353

Alternate gene names: NA

Gene position: 3697751-3695454 (Counterclockwise)

Preceding gene: 22127230

Following gene: 22127228

Centisome position: 80.37

GC content: 43.73

Gene sequence:

>2298_bases
ATGATTATCAGCCCTTTATTTTTAAAAGATAAGTCCAACTCAGAAGACGATGCTTCCTGGGTCTCCAGAATGATGCCTGT
AGATCCTGAGCGCGGTTTTCCCCTTAACAGCCATCGCTCGTGGCACGGAGGCATACATATTCCTCATACTGACAGCGGCG
GTACGCCAGAAAAGATCCGAGCTATCGCAGATGGCACGGTGCACTCTCTCCGCCAGCCAGTCGGTGATAAAAAAGGCATT
CCTCCTTATAACTACAATGGCGCTACGGATTGCGGCTATGTTTTGTTGAAACATGAAACAGAGATCGGTTCAGGTGAAAA
TGCCAAAGTAGTGTATTTCTCGCTTTATATGCATTTGGCCTCTATAGATGCAGCAGTAAAAACTGGCGAGAAGATTTATC
GCAAAGATCCCATTGGTACCGTCGGTCAGGTTGATGGAGGCAATGCAGTCCATTTCCAGATATTTTGTGATGACACTAAT
TTGACAAAATTAGTTGGCCGCACGACGCCAGAACTGGATTTGACGAAAAATGGCCGAACGGATGCGGTTTATGGCGATAT
GTATTTTTATCTGCCAACAGGCACCAAATTTTACAGCCACGCGCCGGCCAACAATGCCACTACAACCACCGAAGCTGAAA
CCTATACCAGCACCGAACCTCTCTTTGTCAGCATGAGTTTTGATAAGGGCAAGTGCACCATGCTCACACGTAAGAAAGGT
GTGTTCTCTATTGGAAAATACAGCGAGGTCGGTGAAAAACTGGAAAACACCGATGGTGCAGATTACGAATACAACGTGTA
TGCGCAGGCTAAGAAGTTATACCCGCAAAGCCAAAGTGCAGGTTATGAGCTGTTAAGGTTTGGTCGGGTCATCAACACCG
ACTATGAAACATTGGTCCCTGCCGACGCACCATTGTGGCGAACCATCAGTTATCCGGGTGGCAAAGGCGTTGTGAACCTA
GCCCTTCCGGCAGTGAAGAAGTTCAGTGATGGTGATTTCCCGCACTGGACTGGCTGGCAACTGATCGATGACGACACAGA
CGAAAACAGCCAGTGCAATTCAGAGCAGGTACTCTGCCGTATTGGCGATGATATGCAGGGTCTGATCTGCCATTTACCAC
TGGAATGGGACGCATCGACGCTAGAGAAACGTCTCTCATGGCTGAAAACGACGGTGATAAATGAAAGTCTGGCCAATCAA
AAAGCAAGCCATCAGGTAGATGACACAGGGAATAATGCTTCAGGGTATGCATTCGATAATATAAACCCTGACATGAGCGT
GCTGAATGCGCAAAGTACTCCCTCTTTTGAACAAGCAGCAAAAGATACCGCGATGGCAGAAGCCGACTGGAATGCGCTTA
TCGAACATGCTAAAGCATTGTGTTTTGATGTCAGCGGTTTGCCTGTAGGCCGGGTCTGGCACTTTAACCCTATTTCGTTT
ATTGCGCATTTTAGGAAGTGCGGGTGGTTAGATCCGGAAAAAATAAAATCCATCCTGACATCAGCATTAAATAAAAAACG
CAATGTAAGAAAAATAACTTTAATCGAGAAAGCCAGTGATAGTAACTACACATTTTTAAATTTAGCAATGCGCAAATATA
ATATATTAACACCGAATAGACAAAGTCATTTTCTTGGGCAGGGGGCCGTCGAATCTGATTCACTAACAGCCATGCAAGAG
GTTAGCCAGGAGCAGGTGATTGTAAATGGCAAACAAACTGGTGGCGGCATTGTTATAAAATCAACTTTGAATGAGTCCGA
GTTGGGACATTGGTACGGTTCTGAACCCAGTGAATTAGATATATATTACTCAGGAAATAAGTACAATAAAAATGGCGGAT
TAATTGCTGGGTCATATAGCTGGAGTAACGGAAACTGCGGGGATGTTGATGCTCAGAAATTTCGTGGGCGTGGTTTTAAA
ATGTTAACCGGTAGAGATAAATATGCAGATTATTGGGTTTATCGAGGATGGCTATTGAAAAGTTCTTTTGATGCATACTG
GTGGGACGATGTAAAGTATAAATCAAAAAACCTTAAGGCGATGAAAAAACGCCCCGCGATTATAGATGATCCTCACAAAA
TCACGGCCTCACCATATAACTGTATTGATTCTGGTTCTTTTTTTATTACTTGTTTTAGACGTAGTACAGTAAAAGAAATT
GATAAAGATCAAGCAGAAAGTGCCGATGACAGTGTAGTGACAAAGGTCACTCAAGCGATTAATGGTGGTGACATTGGGCT
GTCACAAAGAAAAGTAATGACTAATAACGCAAAGGGAAAATTAAATGATAAATATTAA

Upstream 100 bases:

>100_bases
GTTAGATAAGGCCAAGCTCCCAACTGAATTTCCAGCCTTAGCCGCTAAAACTGAAGACCCCATTAAACGTTGGCTATTCT
CTTAACAGGACGTTAAAAAT

Downstream 100 bases:

>100_bases
AAAATTGACATTGAAATATTTTTATATTTTATTTTTTACACCCCACTTAGCACATGCTACGTATTATAATGAAGTGTCAT
TTGATGATTACATCGTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 765; Mature: 765

Protein sequence:

>765_residues
MIISPLFLKDKSNSEDDASWVSRMMPVDPERGFPLNSHRSWHGGIHIPHTDSGGTPEKIRAIADGTVHSLRQPVGDKKGI
PPYNYNGATDCGYVLLKHETEIGSGENAKVVYFSLYMHLASIDAAVKTGEKIYRKDPIGTVGQVDGGNAVHFQIFCDDTN
LTKLVGRTTPELDLTKNGRTDAVYGDMYFYLPTGTKFYSHAPANNATTTTEAETYTSTEPLFVSMSFDKGKCTMLTRKKG
VFSIGKYSEVGEKLENTDGADYEYNVYAQAKKLYPQSQSAGYELLRFGRVINTDYETLVPADAPLWRTISYPGGKGVVNL
ALPAVKKFSDGDFPHWTGWQLIDDDTDENSQCNSEQVLCRIGDDMQGLICHLPLEWDASTLEKRLSWLKTTVINESLANQ
KASHQVDDTGNNASGYAFDNINPDMSVLNAQSTPSFEQAAKDTAMAEADWNALIEHAKALCFDVSGLPVGRVWHFNPISF
IAHFRKCGWLDPEKIKSILTSALNKKRNVRKITLIEKASDSNYTFLNLAMRKYNILTPNRQSHFLGQGAVESDSLTAMQE
VSQEQVIVNGKQTGGGIVIKSTLNESELGHWYGSEPSELDIYYSGNKYNKNGGLIAGSYSWSNGNCGDVDAQKFRGRGFK
MLTGRDKYADYWVYRGWLLKSSFDAYWWDDVKYKSKNLKAMKKRPAIIDDPHKITASPYNCIDSGSFFITCFRRSTVKEI
DKDQAESADDSVVTKVTQAINGGDIGLSQRKVMTNNAKGKLNDKY

Sequences:

>Translated_765_residues
MIISPLFLKDKSNSEDDASWVSRMMPVDPERGFPLNSHRSWHGGIHIPHTDSGGTPEKIRAIADGTVHSLRQPVGDKKGI
PPYNYNGATDCGYVLLKHETEIGSGENAKVVYFSLYMHLASIDAAVKTGEKIYRKDPIGTVGQVDGGNAVHFQIFCDDTN
LTKLVGRTTPELDLTKNGRTDAVYGDMYFYLPTGTKFYSHAPANNATTTTEAETYTSTEPLFVSMSFDKGKCTMLTRKKG
VFSIGKYSEVGEKLENTDGADYEYNVYAQAKKLYPQSQSAGYELLRFGRVINTDYETLVPADAPLWRTISYPGGKGVVNL
ALPAVKKFSDGDFPHWTGWQLIDDDTDENSQCNSEQVLCRIGDDMQGLICHLPLEWDASTLEKRLSWLKTTVINESLANQ
KASHQVDDTGNNASGYAFDNINPDMSVLNAQSTPSFEQAAKDTAMAEADWNALIEHAKALCFDVSGLPVGRVWHFNPISF
IAHFRKCGWLDPEKIKSILTSALNKKRNVRKITLIEKASDSNYTFLNLAMRKYNILTPNRQSHFLGQGAVESDSLTAMQE
VSQEQVIVNGKQTGGGIVIKSTLNESELGHWYGSEPSELDIYYSGNKYNKNGGLIAGSYSWSNGNCGDVDAQKFRGRGFK
MLTGRDKYADYWVYRGWLLKSSFDAYWWDDVKYKSKNLKAMKKRPAIIDDPHKITASPYNCIDSGSFFITCFRRSTVKEI
DKDQAESADDSVVTKVTQAINGGDIGLSQRKVMTNNAKGKLNDKY
>Mature_765_residues
MIISPLFLKDKSNSEDDASWVSRMMPVDPERGFPLNSHRSWHGGIHIPHTDSGGTPEKIRAIADGTVHSLRQPVGDKKGI
PPYNYNGATDCGYVLLKHETEIGSGENAKVVYFSLYMHLASIDAAVKTGEKIYRKDPIGTVGQVDGGNAVHFQIFCDDTN
LTKLVGRTTPELDLTKNGRTDAVYGDMYFYLPTGTKFYSHAPANNATTTTEAETYTSTEPLFVSMSFDKGKCTMLTRKKG
VFSIGKYSEVGEKLENTDGADYEYNVYAQAKKLYPQSQSAGYELLRFGRVINTDYETLVPADAPLWRTISYPGGKGVVNL
ALPAVKKFSDGDFPHWTGWQLIDDDTDENSQCNSEQVLCRIGDDMQGLICHLPLEWDASTLEKRLSWLKTTVINESLANQ
KASHQVDDTGNNASGYAFDNINPDMSVLNAQSTPSFEQAAKDTAMAEADWNALIEHAKALCFDVSGLPVGRVWHFNPISF
IAHFRKCGWLDPEKIKSILTSALNKKRNVRKITLIEKASDSNYTFLNLAMRKYNILTPNRQSHFLGQGAVESDSLTAMQE
VSQEQVIVNGKQTGGGIVIKSTLNESELGHWYGSEPSELDIYYSGNKYNKNGGLIAGSYSWSNGNCGDVDAQKFRGRGFK
MLTGRDKYADYWVYRGWLLKSSFDAYWWDDVKYKSKNLKAMKKRPAIIDDPHKITASPYNCIDSGSFFITCFRRSTVKEI
DKDQAESADDSVVTKVTQAINGGDIGLSQRKVMTNNAKGKLNDKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85108; Mature: 85108

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00107 PROTEIN_KINASE_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIISPLFLKDKSNSEDDASWVSRMMPVDPERGFPLNSHRSWHGGIHIPHTDSGGTPEKIR
CEECCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHH
AIADGTVHSLRQPVGDKKGIPPYNYNGATDCGYVLLKHETEIGSGENAKVVYFSLYMHLA
HHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEHHHHH
SIDAAVKTGEKIYRKDPIGTVGQVDGGNAVHFQIFCDDTNLTKLVGRTTPELDLTKNGRT
HHHHHHHCCHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHCCCCCCEEECCCCCC
DAVYGDMYFYLPTGTKFYSHAPANNATTTTEAETYTSTEPLFVSMSFDKGKCTMLTRKKG
CEEEEEEEEEECCCCCEEECCCCCCCCCCCCCCEECCCCCEEEEEECCCCCEEEEEECCC
VFSIGKYSEVGEKLENTDGADYEYNVYAQAKKLYPQSQSAGYELLRFGRVINTDYETLVP
CEECCCHHHHHHHHHCCCCCCEEEEEEEEHHHCCCCCCCCCHHHHHHHHHHCCCHHHCCC
ADAPLWRTISYPGGKGVVNLALPAVKKFSDGDFPHWTGWQLIDDDTDENSQCNSEQVLCR
CCCCCEEEEECCCCCCEEEEEHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEE
IGDDMQGLICHLPLEWDASTLEKRLSWLKTTVINESLANQKASHQVDDTGNNASGYAFDN
ECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCEEECC
INPDMSVLNAQSTPSFEQAAKDTAMAEADWNALIEHAKALCFDVSGLPVGRVWHFNPISF
CCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEECCHHHH
IAHFRKCGWLDPEKIKSILTSALNKKRNVRKITLIEKASDSNYTFLNLAMRKYNILTPNR
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEEHHEEECCCCC
QSHFLGQGAVESDSLTAMQEVSQEQVIVNGKQTGGGIVIKSTLNESELGHWYGSEPSELD
CHHCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCEEE
IYYSGNKYNKNGGLIAGSYSWSNGNCGDVDAQKFRGRGFKMLTGRDKYADYWVYRGWLLK
EEECCCEECCCCCEEEEEECCCCCCCCCCCHHHHCCCCEEEECCCCCCCCEEEEEEEEEE
SSFDAYWWDDVKYKSKNLKAMKKRPAIIDDPHKITASPYNCIDSGSFFITCFRRSTVKEI
CCCCCEECCCEEECCCCHHHHHHCCCCCCCCCEECCCCCCCCCCCCEEEEEECHHHHHHH
DKDQAESADDSVVTKVTQAINGGDIGLSQRKVMTNNAKGKLNDKY
HHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MIISPLFLKDKSNSEDDASWVSRMMPVDPERGFPLNSHRSWHGGIHIPHTDSGGTPEKIR
CEECCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHH
AIADGTVHSLRQPVGDKKGIPPYNYNGATDCGYVLLKHETEIGSGENAKVVYFSLYMHLA
HHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEHHHHH
SIDAAVKTGEKIYRKDPIGTVGQVDGGNAVHFQIFCDDTNLTKLVGRTTPELDLTKNGRT
HHHHHHHCCHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHCCCCCCEEECCCCCC
DAVYGDMYFYLPTGTKFYSHAPANNATTTTEAETYTSTEPLFVSMSFDKGKCTMLTRKKG
CEEEEEEEEEECCCCCEEECCCCCCCCCCCCCCEECCCCCEEEEEECCCCCEEEEEECCC
VFSIGKYSEVGEKLENTDGADYEYNVYAQAKKLYPQSQSAGYELLRFGRVINTDYETLVP
CEECCCHHHHHHHHHCCCCCCEEEEEEEEHHHCCCCCCCCCHHHHHHHHHHCCCHHHCCC
ADAPLWRTISYPGGKGVVNLALPAVKKFSDGDFPHWTGWQLIDDDTDENSQCNSEQVLCR
CCCCCEEEEECCCCCCEEEEEHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEE
IGDDMQGLICHLPLEWDASTLEKRLSWLKTTVINESLANQKASHQVDDTGNNASGYAFDN
ECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCEEECC
INPDMSVLNAQSTPSFEQAAKDTAMAEADWNALIEHAKALCFDVSGLPVGRVWHFNPISF
CCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEECCHHHH
IAHFRKCGWLDPEKIKSILTSALNKKRNVRKITLIEKASDSNYTFLNLAMRKYNILTPNR
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEEHHEEECCCCC
QSHFLGQGAVESDSLTAMQEVSQEQVIVNGKQTGGGIVIKSTLNESELGHWYGSEPSELD
CHHCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCEEE
IYYSGNKYNKNGGLIAGSYSWSNGNCGDVDAQKFRGRGFKMLTGRDKYADYWVYRGWLLK
EEECCCEECCCCCEEEEEECCCCCCCCCCCHHHHCCCCEEEECCCCCCCCEEEEEEEEEE
SSFDAYWWDDVKYKSKNLKAMKKRPAIIDDPHKITASPYNCIDSGSFFITCFRRSTVKEI
CCCCCEECCCEEECCCCHHHHHHCCCCCCCCCEECCCCCCCCCCCCEEEEEECHHHHHHH
DKDQAESADDSVVTKVTQAINGGDIGLSQRKVMTNNAKGKLNDKY
HHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA