| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
Click here to switch to the map view.
The map label for this gene is 22127224
Identifier: 22127224
GI number: 22127224
Start: 3691355
End: 3691507
Strand: Reverse
Name: 22127224
Synonym: y3348
Alternate gene names: NA
Gene position: 3691507-3691355 (Counterclockwise)
Preceding gene: 22127225
Following gene: 22127223
Centisome position: 80.24
GC content: 49.67
Gene sequence:
>153_bases TTGGTCGATGCTGAGACCAGTTCACCTATCACTCAGGCGTGTATTTCCGCCGGGGAAACGTGCGCATTTAATGACATCAA TTTACCGGCATTGCATCAGTGCTCCGCACTCTGTGATGTCATCGATATGCCAAAATGGCAGCCTCATACCTGA
Upstream 100 bases:
>100_bases CTACTAAGCCCCTTATTTCTTCCATGCGGTAAGGCAACCTTTTGCTCACTGTTAGGCATTATTAAAAATAGAGCAGAGTC TCTGATTTTACTGATGTCTA
Downstream 100 bases:
>100_bases CCGTCTGAGAGTAAGTGATATGACACTATTAAAAATAGCAACAAGCGCCCGCCTGGCTTCTTATGTAGAAACTCAGCGCG GAGTGGTGTACCTCAATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 50; Mature: 50
Protein sequence:
>50_residues MVDAETSSPITQACISAGETCAFNDINLPALHQCSALCDVIDMPKWQPHT
Sequences:
>Translated_50_residues MVDAETSSPITQACISAGETCAFNDINLPALHQCSALCDVIDMPKWQPHT >Mature_50_residues MVDAETSSPITQACISAGETCAFNDINLPALHQCSALCDVIDMPKWQPHT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5375; Mature: 5375
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 12.0 %Cys+Met (Translated Protein) 8.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 12.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDAETSSPITQACISAGETCAFNDINLPALHQCSALCDVIDMPKWQPHT CCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MVDAETSSPITQACISAGETCAFNDINLPALHQCSALCDVIDMPKWQPHT CCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA