Definition Yersinia pestis KIM 10 chromosome, complete genome.
Accession NC_004088
Length 4,600,755

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The map label for this gene is 22127218

Identifier: 22127218

GI number: 22127218

Start: 3681768

End: 3682877

Strand: Direct

Name: 22127218

Synonym: y3342

Alternate gene names: NA

Gene position: 3681768-3682877 (Clockwise)

Preceding gene: 161484756

Following gene: 22127219

Centisome position: 80.03

GC content: 54.05

Gene sequence:

>1110_bases
GTGATAATTATGCGTCTGTTGTTACTTATTTTCCTGCTCTGCACTTGGGCAGTTAGCGCCAAAACGATTACCGATATTAC
CGGCCAACGCATCGAAATTCCGGATAACCCACAGCGTATCGTATTAGGTGAAAGCCGCATGCTATATACCCTCGCGTTGC
TGGAACCGGGCTACCCCGCCGCTCGCGTGGTGGGCTGGCCGTTGGACCTGAAGAAATACGATCCGCAAAGCTGGGCGCTA
TATACCGATAAGTTTCCGCAGATGACCCACATTCCGGCTCTGGGCAGCACGGGTCTGCGCGATATCAACCCGGAGAAGGT
GCTGGAGTTGGCACCAGATCTGGTTATCCTGCCAGTACTCGCTAAAACCACTCATGAAGAAATCGCGCTAATTTCCCTGC
TCAAGCAAGCGCATATCCCGGTGATCCGCGTCGATTTACGCGTCGATCTGCTCAATCACACCATTCCCAGCCTACGCCTG
CTCGGCGAAGCACTGAACCGCCAAGATCGCGCCGAAGCCTTTATTTCTCTGTATCAGTCCCATATGGATCGCATCCACCA
GCGCATCGCCGCTTATCAGGGGCCGCACCCTAGCGTGTTGCTGCAATTGCATCTGGGGCGCGGTGACGAATGCTGCACCA
CCACGCTAAAGGGCAATCTCGGCCAACTGCTGGAGTTTGCCGGTGGTAACAACATCGCTGCCGCACAAGTGAAAGGGGTA
TTCGGCCAGCTTAGCGAAGAGTATGTGCTGGCCCGTTCACCAGAGATTTATATTGCTACCGGCATGGCAACGGCTGGCAG
CCAAGCCAAAACGCTGGCGCTCGGCCCACAGGTCAGCACCGCGCAAGCGCAGGAGAGTTTCCGTCGCGTTATCGCCACGC
AAAGCAAATTGCAGCACCTTCCTGCGATTCAAAATGGTCACGCTTGGGGGTTGTGGCACAACTTCTATTTAAGCCCGCTG
CATGTAGTGGCGGCGGAGTTTTTCGCTAAAACGCTTTATCCACACCTGTTTGCCGACGTTTCACCACAGGATACGCTGCA
AACTATTTACCAGCAGTTTTTGCCGCTGGATTTCACAGGAACTTTCTGGAGCCATTTGGATAATGAATAA

Upstream 100 bases:

>100_bases
ACCTACAGCGGCCATCTTACCTTTCAACACATTTTTTTTGAATATCTCAAATTGATGTTACAAACGATTTTGATTATCAT
TCGCCCTCTTTTTTTAGCCA

Downstream 100 bases:

>100_bases
AATAAACATGTTCATGCTATCCACGTTCATGCGATCCATGTTCATGCGATCTACGTTGATACCCTCTACGTTCATACTGT
CCACACTACTGCTGCCGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Ferrichrome/Ferrioxamine B Periplasmic Transporter; Iron Transporter; Ferrisiderophore Receptor Irp6A; Fe3+-Hydroxamate ABC Transporter Periplasmic Protein; Copper Amine Oxidase Domain Protein; Copper Amine Oxidase Domain-Containing Protein; Iron(III) ABC Transporter

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MIIMRLLLLIFLLCTWAVSAKTITDITGQRIEIPDNPQRIVLGESRMLYTLALLEPGYPAARVVGWPLDLKKYDPQSWAL
YTDKFPQMTHIPALGSTGLRDINPEKVLELAPDLVILPVLAKTTHEEIALISLLKQAHIPVIRVDLRVDLLNHTIPSLRL
LGEALNRQDRAEAFISLYQSHMDRIHQRIAAYQGPHPSVLLQLHLGRGDECCTTTLKGNLGQLLEFAGGNNIAAAQVKGV
FGQLSEEYVLARSPEIYIATGMATAGSQAKTLALGPQVSTAQAQESFRRVIATQSKLQHLPAIQNGHAWGLWHNFYLSPL
HVVAAEFFAKTLYPHLFADVSPQDTLQTIYQQFLPLDFTGTFWSHLDNE

Sequences:

>Translated_369_residues
MIIMRLLLLIFLLCTWAVSAKTITDITGQRIEIPDNPQRIVLGESRMLYTLALLEPGYPAARVVGWPLDLKKYDPQSWAL
YTDKFPQMTHIPALGSTGLRDINPEKVLELAPDLVILPVLAKTTHEEIALISLLKQAHIPVIRVDLRVDLLNHTIPSLRL
LGEALNRQDRAEAFISLYQSHMDRIHQRIAAYQGPHPSVLLQLHLGRGDECCTTTLKGNLGQLLEFAGGNNIAAAQVKGV
FGQLSEEYVLARSPEIYIATGMATAGSQAKTLALGPQVSTAQAQESFRRVIATQSKLQHLPAIQNGHAWGLWHNFYLSPL
HVVAAEFFAKTLYPHLFADVSPQDTLQTIYQQFLPLDFTGTFWSHLDNE
>Mature_369_residues
MIIMRLLLLIFLLCTWAVSAKTITDITGQRIEIPDNPQRIVLGESRMLYTLALLEPGYPAARVVGWPLDLKKYDPQSWAL
YTDKFPQMTHIPALGSTGLRDINPEKVLELAPDLVILPVLAKTTHEEIALISLLKQAHIPVIRVDLRVDLLNHTIPSLRL
LGEALNRQDRAEAFISLYQSHMDRIHQRIAAYQGPHPSVLLQLHLGRGDECCTTTLKGNLGQLLEFAGGNNIAAAQVKGV
FGQLSEEYVLARSPEIYIATGMATAGSQAKTLALGPQVSTAQAQESFRRVIATQSKLQHLPAIQNGHAWGLWHNFYLSPL
HVVAAEFFAKTLYPHLFADVSPQDTLQTIYQQFLPLDFTGTFWSHLDNE

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41116; Mature: 41116

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIMRLLLLIFLLCTWAVSAKTITDITGQRIEIPDNPQRIVLGESRMLYTLALLEPGYPA
CHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCCEEEEECCCEEEEEEEECCCCCH
ARVVGWPLDLKKYDPQSWALYTDKFPQMTHIPALGSTGLRDINPEKVLELAPDLVILPVL
HHEEECCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCCCCHHHHHHHCCCEEEEHHH
AKTTHEEIALISLLKQAHIPVIRVDLRVDLLNHTIPSLRLLGEALNRQDRAEAFISLYQS
HHCCHHHHHHHHHHHHHCCCEEEEEEEHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHH
HMDRIHQRIAAYQGPHPSVLLQLHLGRGDECCTTTLKGNLGQLLEFAGGNNIAAAQVKGV
HHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCHHHHHHHCCCCCEEHHHHHHH
FGQLSEEYVLARSPEIYIATGMATAGSQAKTLALGPQVSTAQAQESFRRVIATQSKLQHL
HHHCCHHEEEECCCCEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC
PAIQNGHAWGLWHNFYLSPLHVVAAEFFAKTLYPHLFADVSPQDTLQTIYQQFLPLDFTG
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC
TFWSHLDNE
HHHHHCCCC
>Mature Secondary Structure
MIIMRLLLLIFLLCTWAVSAKTITDITGQRIEIPDNPQRIVLGESRMLYTLALLEPGYPA
CHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCCEEEEECCCEEEEEEEECCCCCH
ARVVGWPLDLKKYDPQSWALYTDKFPQMTHIPALGSTGLRDINPEKVLELAPDLVILPVL
HHEEECCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCCCCHHHHHHHCCCEEEEHHH
AKTTHEEIALISLLKQAHIPVIRVDLRVDLLNHTIPSLRLLGEALNRQDRAEAFISLYQS
HHCCHHHHHHHHHHHHHCCCEEEEEEEHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHH
HMDRIHQRIAAYQGPHPSVLLQLHLGRGDECCTTTLKGNLGQLLEFAGGNNIAAAQVKGV
HHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCHHHHHHHCCCCCEEHHHHHHH
FGQLSEEYVLARSPEIYIATGMATAGSQAKTLALGPQVSTAQAQESFRRVIATQSKLQHL
HHHCCHHEEEECCCCEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC
PAIQNGHAWGLWHNFYLSPLHVVAAEFFAKTLYPHLFADVSPQDTLQTIYQQFLPLDFTG
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC
TFWSHLDNE
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA