| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is yggN [H]
Identifier: 22127210
GI number: 22127210
Start: 3675388
End: 3675618
Strand: Reverse
Name: yggN [H]
Synonym: y3334
Alternate gene names: 22127210
Gene position: 3675618-3675388 (Counterclockwise)
Preceding gene: 22127211
Following gene: 22127209
Centisome position: 79.89
GC content: 50.65
Gene sequence:
>231_bases ATGGGTGGCGTGTTGCAGGATAGCCTGAATGAGATGGGGGTTAAGCAGGCCACCAGTAGTGGTAATAATCCATTGCAGGC CATTCTAGGCAATCTGGGCGGGTTACAGCAGGCTATTAAAAATGAATGGAACGAGCAGGAGCAGGATTTCCAGCAATTTG GCCGCGAGGTTTGCGGGCGAGTGACCACTTTGGAACAGCAGCGTATCGCGTTGCTTAAATCCTTAGAGTAA
Upstream 100 bases:
>100_bases AGATGGCTCGCATTATCGAGAAACGCAGTGACGGTTTAGCTTTCCACCATCAGGCGATTGCTCAGGTAGAAAAAGAGGCC GTGAGTTGGTCCAGCAGAGC
Downstream 100 bases:
>100_bases TAAAAGGGGGGGGGGGGATATTCCCCCTCCAAATTTAGAATCGCCATATATCCGTCATACTTCAAACAGCCAGTGTGCTA GCCTGTCGTTGCTCTTCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MGGVLQDSLNEMGVKQATSSGNNPLQAILGNLGGLQQAIKNEWNEQEQDFQQFGREVCGRVTTLEQQRIALLKSLE
Sequences:
>Translated_76_residues MGGVLQDSLNEMGVKQATSSGNNPLQAILGNLGGLQQAIKNEWNEQEQDFQQFGREVCGRVTTLEQQRIALLKSLE >Mature_75_residues GGVLQDSLNEMGVKQATSSGNNPLQAILGNLGGLQQAIKNEWNEQEQDFQQFGREVCGRVTTLEQQRIALLKSLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789328, Length=76, Percent_Identity=61.8421052631579, Blast_Score=104, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021307 [H]
Pfam domain/function: PF11101 DUF2884 [H]
EC number: NA
Molecular weight: Translated: 8360; Mature: 8228
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGVLQDSLNEMGVKQATSSGNNPLQAILGNLGGLQQAIKNEWNEQEQDFQQFGREVCGR CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VTTLEQQRIALLKSLE HHHHHHHHHHHHHHCC >Mature Secondary Structure GGVLQDSLNEMGVKQATSSGNNPLQAILGNLGGLQQAIKNEWNEQEQDFQQFGREVCGR CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VTTLEQQRIALLKSLE HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]