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The map label for this gene is yqgF [C]

Identifier: 22127199

GI number: 22127199

Start: 3656912

End: 3657334

Strand: Direct

Name: yqgF [C]

Synonym: y3323

Alternate gene names: 22127199

Gene position: 3656912-3657334 (Clockwise)

Preceding gene: 161484759

Following gene: 22127200

Centisome position: 79.49

GC content: 53.19

Gene sequence:

>423_bases
ATGGCTAATCGCACAATTATTGCTTTTGATTTTGGTACCAAAAGTATCGGTGTCGCCATCGGTCAGGAAGTCACCGGAAC
GGCCAGAGCGCTAACCGCGTTTAAAGCACAAGATGGCACCCCGGATTGGCAGCAAGTCGAAAAGCTGTTGAAAGAGTGGC
AGCCCAATTTAGTGGTAGTCGGCCTGCCGCTCAATATGGATGGCACTGAACAACCACTAACCGCCAGAGCTCGTCGGTTT
GCCAACCGTCTGCATGGGCGCTTTGGTGTACAGGTCGCCTTACAGGATGAACGCCTCAGTACGGTAGAAGCCCGCGCCAA
TCTGTTTGACCGCGGTGGCTATCGCGCTCTGGATAAAGGCAGTGTCGATGCAGCCTCTGCGGTGATCATTTTGGAAAGCT
GGTTTGATGAGCAAGCAGGTTGA

Upstream 100 bases:

>100_bases
ATATTTTATTCAATACGCCAATTGCCGAACGCTGGCAGGCAGCGGCCAATAAACTGGGCATTAATATCTTTAATATTGCT
CCGCAAGCAGGACATGCCTG

Downstream 100 bases:

>100_bases
ATCCGCGATGTTCTGTTGATCACAAACGGTTTCCTACTTTCCATTCCCGCGACCTGAATAAGTAATCCCTGCATAACGTT
GTATACTTATAACTTTGTAT

Product: Holliday junction resolvase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MANRTIIAFDFGTKSIGVAIGQEVTGTARALTAFKAQDGTPDWQQVEKLLKEWQPNLVVVGLPLNMDGTEQPLTARARRF
ANRLHGRFGVQVALQDERLSTVEARANLFDRGGYRALDKGSVDAASAVIILESWFDEQAG

Sequences:

>Translated_140_residues
MANRTIIAFDFGTKSIGVAIGQEVTGTARALTAFKAQDGTPDWQQVEKLLKEWQPNLVVVGLPLNMDGTEQPLTARARRF
ANRLHGRFGVQVALQDERLSTVEARANLFDRGGYRALDKGSVDAASAVIILESWFDEQAG
>Mature_139_residues
ANRTIIAFDFGTKSIGVAIGQEVTGTARALTAFKAQDGTPDWQQVEKLLKEWQPNLVVVGLPLNMDGTEQPLTARARRFA
NRLHGRFGVQVALQDERLSTVEARANLFDRGGYRALDKGSVDAASAVIILESWFDEQAG

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination [H]

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family [H]

Homologues:

Organism=Escherichia coli, GI1789318, Length=133, Percent_Identity=76.6917293233083, Blast_Score=223, Evalue=3e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337 [H]

Pfam domain/function: PF03652 UPF0081 [H]

EC number: NA

Molecular weight: Translated: 15316; Mature: 15185

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANRTIIAFDFGTKSIGVAIGQEVTGTARALTAFKAQDGTPDWQQVEKLLKEWQPNLVVV
CCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEE
GLPLNMDGTEQPLTARARRFANRLHGRFGVQVALQDERLSTVEARANLFDRGGYRALDKG
EEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC
SVDAASAVIILESWFDEQAG
CCCCHHHEEEEEHHHCCCCC
>Mature Secondary Structure 
ANRTIIAFDFGTKSIGVAIGQEVTGTARALTAFKAQDGTPDWQQVEKLLKEWQPNLVVV
CCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEE
GLPLNMDGTEQPLTARARRFANRLHGRFGVQVALQDERLSTVEARANLFDRGGYRALDKG
EEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC
SVDAASAVIILESWFDEQAG
CCCCHHHEEEEEHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA