| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22127160
Identifier: 22127160
GI number: 22127160
Start: 3614454
End: 3614984
Strand: Reverse
Name: 22127160
Synonym: y3284
Alternate gene names: NA
Gene position: 3614984-3614454 (Counterclockwise)
Preceding gene: 22127161
Following gene: 22127158
Centisome position: 78.57
GC content: 45.39
Gene sequence:
>531_bases GTGCTTGTGTCATGTTCAGGAGTGACTCTATCGATGATTATGCGTTTATCCAAAGCGCTGATGGTGTGTGCTATTGCGCT TTTTGCCACGCTGGTTGTTTTCGGTAATATGACTGACTACAACACCAACTTCGTTTTTGTTCATCATGTCTTACAGATGG ACACTATTTTCCCTGATGCCACCATTAGCTATCGTGCGATCCACTCGCCGTGGCTACAACAACTGGGTTATATCGGCATT ATCCTGCTCGAAACACTGACAGCGGTATTTTGCTGGGTTGGTGGCATAGGTTTGCTGATAAATAGGAAAGCGCCAGCAAA AGTCTTTAACCGGAAAAAGGGTATTGCGATTATCGGCCTGACTCTGGGTTTCCTGACCTGGCAGGTGGTTTTTATGTCGA TAGGGGGAGAATGGTTTGGTATGTGGATGTCAAAGCAATGGAATGGCGTTCCTAATGCTTTCCGCTTCTTTGTCACCACC ATTCTGGTACTGATTTATTTGGTACAGCCTGATGGCGAGTTAGATGAATAA
Upstream 100 bases:
>100_bases TGTGTTAGTGTTTAATTTCCATCAAGTAAATAGTGTTTACTGCTGGTGGGTATCGGTTAAGCCACTGTTTTGTTTCTGAA CTCACTCGCGCGCCAACCAA
Downstream 100 bases:
>100_bases CCCACCCATCTATTTGATATAAAACAAAATACAGAGACCGGTTAACCGGTCTCTGTAGAGTAGAACTCTTTATTATTTAT CTTCGGCGAGTGAGTAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MLVSCSGVTLSMIMRLSKALMVCAIALFATLVVFGNMTDYNTNFVFVHHVLQMDTIFPDATISYRAIHSPWLQQLGYIGI ILLETLTAVFCWVGGIGLLINRKAPAKVFNRKKGIAIIGLTLGFLTWQVVFMSIGGEWFGMWMSKQWNGVPNAFRFFVTT ILVLIYLVQPDGELDE
Sequences:
>Translated_176_residues MLVSCSGVTLSMIMRLSKALMVCAIALFATLVVFGNMTDYNTNFVFVHHVLQMDTIFPDATISYRAIHSPWLQQLGYIGI ILLETLTAVFCWVGGIGLLINRKAPAKVFNRKKGIAIIGLTLGFLTWQVVFMSIGGEWFGMWMSKQWNGVPNAFRFFVTT ILVLIYLVQPDGELDE >Mature_176_residues MLVSCSGVTLSMIMRLSKALMVCAIALFATLVVFGNMTDYNTNFVFVHHVLQMDTIFPDATISYRAIHSPWLQQLGYIGI ILLETLTAVFCWVGGIGLLINRKAPAKVFNRKKGIAIIGLTLGFLTWQVVFMSIGGEWFGMWMSKQWNGVPNAFRFFVTT ILVLIYLVQPDGELDE
Specific function: Unknown
COG id: COG5472
COG function: function code S; Predicted small integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19718; Mature: 19718
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVSCSGVTLSMIMRLSKALMVCAIALFATLVVFGNMTDYNTNFVFVHHVLQMDTIFPDA CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCCC TISYRAIHSPWLQQLGYIGIILLETLTAVFCWVGGIGLLINRKAPAKVFNRKKGIAIIGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCHHHHHCCCCEEEEHH TLGFLTWQVVFMSIGGEWFGMWMSKQWNGVPNAFRFFVTTILVLIYLVQPDGELDE HHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLVSCSGVTLSMIMRLSKALMVCAIALFATLVVFGNMTDYNTNFVFVHHVLQMDTIFPDA CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCCC TISYRAIHSPWLQQLGYIGIILLETLTAVFCWVGGIGLLINRKAPAKVFNRKKGIAIIGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCHHHHHCCCCEEEEHH TLGFLTWQVVFMSIGGEWFGMWMSKQWNGVPNAFRFFVTTILVLIYLVQPDGELDE HHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA