| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22127129
Identifier: 22127129
GI number: 22127129
Start: 3585051
End: 3585818
Strand: Reverse
Name: 22127129
Synonym: y3253
Alternate gene names: NA
Gene position: 3585818-3585051 (Counterclockwise)
Preceding gene: 22127130
Following gene: 22127128
Centisome position: 77.94
GC content: 51.17
Gene sequence:
>768_bases ATGGGCAGAACGGCTCAACTATTACTGGTAAGCTGCCTATTAGCGCTATTTATGCCGCCCGCGATGGCAGAGGTTAGCGA CAAACTGCAGTTGAGCCATAAGGTGTATGCCCATGATTATCAGGCGTTTTGGTTGTGGTCAGGTGTGAACCCACAGCCCG CTTTACAGCAGGCGAATCAGGTTTATCTGCATCAGGGGGAAGTGGTTATTCGCCAGCGAGCCGCCTGGTTTCAGAAAATG GGGCTACCCAGCTCTAGGCTGACACTGCCTGCGATGTGGGTCACGGTGCGCATCACCACGTTGGATGTACCAGATGATAT TTTGGCGATTCTGATTGATTTACCCCGGCGGTGGGCCGCCGCTGGAAATCAGGTCATCGGGCTACAGATTGATTTTGATG CAGGCACCTATCGTCTTGATGATTACGCTGGGTTCCTGCGCCGGGTGCGCACTAAGCTGGATCCAAATTTTGCACTTGGT GTAACCGGCTTATTGGACTGGGCAAAAACCGGTAGCATCCAGCAGCTCAATGCGTTGCCGATTGATGAACTGGTGATACA AACCTATCAGGGGCGATCAACCGTTAATCAGTACTCACGTTACTTACCCGCCTTGCTGCAATTACGTCTTCCCTTCAAGA TTGGTTTGGTTCAACACGGGGAGTGGGATCCGCAATGGGAACAGTATCTGGCTGCTTCCCCTTTTTATCGGGGAGAAGTC GTCTTTTTGCTTAATCATCTTCGCTCTGAACCTGCTAACGGTAAATAA
Upstream 100 bases:
>100_bases ATGCCCCATCGGGCTATAATCAATGTGGGGGTGAGGATGTCGATATTGCAACACGTAAGCGTTGGTTTAGCTCATTGAAA ACTCAGTATAAAGGTAGCCG
Downstream 100 bases:
>100_bases TTTTGAACATTTCCGTCGTCACCAATGTGGCCGTGCATTTCTATAAGTGCCAAGTTGCCAAACCTTGTTGCCCAAAGGGA AATAGTTGAGAGAGTTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MGRTAQLLLVSCLLALFMPPAMAEVSDKLQLSHKVYAHDYQAFWLWSGVNPQPALQQANQVYLHQGEVVIRQRAAWFQKM GLPSSRLTLPAMWVTVRITTLDVPDDILAILIDLPRRWAAAGNQVIGLQIDFDAGTYRLDDYAGFLRRVRTKLDPNFALG VTGLLDWAKTGSIQQLNALPIDELVIQTYQGRSTVNQYSRYLPALLQLRLPFKIGLVQHGEWDPQWEQYLAASPFYRGEV VFLLNHLRSEPANGK
Sequences:
>Translated_255_residues MGRTAQLLLVSCLLALFMPPAMAEVSDKLQLSHKVYAHDYQAFWLWSGVNPQPALQQANQVYLHQGEVVIRQRAAWFQKM GLPSSRLTLPAMWVTVRITTLDVPDDILAILIDLPRRWAAAGNQVIGLQIDFDAGTYRLDDYAGFLRRVRTKLDPNFALG VTGLLDWAKTGSIQQLNALPIDELVIQTYQGRSTVNQYSRYLPALLQLRLPFKIGLVQHGEWDPQWEQYLAASPFYRGEV VFLLNHLRSEPANGK >Mature_254_residues GRTAQLLLVSCLLALFMPPAMAEVSDKLQLSHKVYAHDYQAFWLWSGVNPQPALQQANQVYLHQGEVVIRQRAAWFQKMG LPSSRLTLPAMWVTVRITTLDVPDDILAILIDLPRRWAAAGNQVIGLQIDFDAGTYRLDDYAGFLRRVRTKLDPNFALGV TGLLDWAKTGSIQQLNALPIDELVIQTYQGRSTVNQYSRYLPALLQLRLPFKIGLVQHGEWDPQWEQYLAASPFYRGEVV FLLNHLRSEPANGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28899; Mature: 28768
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRTAQLLLVSCLLALFMPPAMAEVSDKLQLSHKVYAHDYQAFWLWSGVNPQPALQQANQ CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCEEEEEECCCCCCHHHHHCCE VYLHQGEVVIRQRAAWFQKMGLPSSRLTLPAMWVTVRITTLDVPDDILAILIDLPRRWAA EEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHCCHHHHH AGNQVIGLQIDFDAGTYRLDDYAGFLRRVRTKLDPNFALGVTGLLDWAKTGSIQQLNALP CCCEEEEEEEEECCCCEEEHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCCCCC IDELVIQTYQGRSTVNQYSRYLPALLQLRLPFKIGLVQHGEWDPQWEQYLAASPFYRGEV HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCCCHH VFLLNHLRSEPANGK HHHHHHHHCCCCCCC >Mature Secondary Structure GRTAQLLLVSCLLALFMPPAMAEVSDKLQLSHKVYAHDYQAFWLWSGVNPQPALQQANQ CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCEEEEEECCCCCCHHHHHCCE VYLHQGEVVIRQRAAWFQKMGLPSSRLTLPAMWVTVRITTLDVPDDILAILIDLPRRWAA EEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHCCHHHHH AGNQVIGLQIDFDAGTYRLDDYAGFLRRVRTKLDPNFALGVTGLLDWAKTGSIQQLNALP CCCEEEEEEEEECCCCEEEHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCCCCC IDELVIQTYQGRSTVNQYSRYLPALLQLRLPFKIGLVQHGEWDPQWEQYLAASPFYRGEV HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCCCHH VFLLNHLRSEPANGK HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA